Clone Sequence Records
BO12204.3prime Sequence
698 bp (697 high quality bases) assembled on 2006-04-20
> BO12204.3prime
ATGGTCTAGAAAGCTTGCTGCTTCGAATGTGAAATTGGTCTTCTTGAAAA
TGGCCACCAACTGGCGGACGCCCTTGCCATTGGCTTCCTCGTAGTATGGA
AGCTGTTCCAGCTTTTTGATCCAAGCACCGATCCTGGGATACTTAGTCGT
ATCCAAGGCCACGAAGGCCTCAAGGGAGGCCACCGATGAAACGAGACTGA
AATCCGCAATGGTCAGTTGATTGCCAGCAATGTAATCCTGTCCCTTGAGA
AAAGTTTCCACAAAATCGTAGATCTCGATAATGGCATCGTATCGCTCCTT
GGGTACTTTCGTCTGTCCCTGGAAGAGCACTGACTTCGATATGCTCCTTA
TGCCATTGGCAAAGACCACTCCGGATTCAAAGTGCAGCCGCTGATCCACA
ACAGCCCGCTTGAGAGGATCTTTCGGGTATAGGGCATCGGAATCGGCATA
TTTCGAGACCAAATAGGCAATAATGGCATGCGAATCCCAGATGTAGTGAC
CGTCATCCTCCAGGGTGGGCACCGTATGCTGTGGATTCTTCTCCAGATAT
TCCGGTGAAAGTTGGGCACGAGCCACAATGTCAACGTTTACATATTCGTA
GGTTAGGTTTAGAGCGGCCAAAGTAAGCTTAACAGCGCGAACTGGGGGAC
TGGGGTCCAAACCGTATAAAGTCAATTTCACCATGTCGACTGATAACT
BO12204.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:39:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17530-PA | 669 | GstE6-RA | 1..666 | 684..19 | 3330 | 100 | Minus |
CG17527-PA | 669 | GstE5-RA | 145..254 | 540..431 | 175 | 86.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:55:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE6-RA | 751 | CG17530-RA | 32..697 | 684..19 | 3330 | 100 | Minus |
GstE5-RA | 734 | CG17527-RA | 28..685 | 686..29 | 800 | 75 | Minus |
GstE7-RA | 765 | CG17531-RA | 169..642 | 547..74 | 495 | 74.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:55:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18406042..18406707 | 684..19 | 3330 | 100 | Minus |
2R | 25286936 | 2R | 18404632..18405289 | 686..29 | 800 | 74.8 | Minus |
2R | 25286936 | 2R | 18407092..18407565 | 547..74 | 480 | 73.4 | Minus |
2R | 25286936 | 2R | 18408003..18408344 | 541..200 | 390 | 74.3 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:55:46 has no hits.
BO12204.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:29:11 Download gff for
BO12204.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-PA | 1..669 | 16..684 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:02:11 Download gff for
BO12204.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17530-PA | 1..669 | 16..684 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:27:22 Download gff for
BO12204.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 32..697 | 19..684 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:08:37 Download gff for
BO12204.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 32..697 | 19..684 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:08:37 Download gff for
BO12204.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18406042..18406707 | 19..684 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:27:22 Download gff for
BO12204.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14293547..14294212 | 19..684 | 100 | | Minus |
BO12204.5prime Sequence
698 bp (697 high quality bases) assembled on 2006-04-20
> BO12204.5prime
GAAGTTATCAGTCGACATGGTGAAATTGACTTTATACGGTTTGGACCCCA
GTCCCCCAGTTCGCGCTGTTAAGCTTACTTTGGCCGCTCTAAACCTAACC
TACGAATATGTAAACGTTGACATTGTGGCTCGTGCCCAACTTTCACCGGA
ATATCTGGAGAAGAATCCACAGCATACGGTGCCCACCCTGGAGGATGACG
GTCACTACATCTGGGATTCGCATGCCATTATTGCCTATTTGGTCTCGAAA
TATGCCGATTCCGATGCCCTATACCCGAAAGATCCTCTCAAGCGGGCTGT
TGTGGATCAGCGGCTGCACTTTGAATCCGGAGTGGTCTTTGCCAATGGCA
TAAGGAGCATATCGAAGTCAGTGCTCTTCCAGGGACAGACGAAAGTACCC
AAGGAGCGATACGATGCCATTATCGAGATCTACGATTTTGTGGAAACTTT
TCTCAAGGGACAGGATTACATTGCTGGCAATCAACTGACCATTGCGGATT
TCAGTCTCGTTTCATCGGTGGCCTCCCTTGAGGCCTTCGTGGCCTTGGAT
ACGACTAAGTATCCCAGGATCGGTGCTTGGATCAAAAAGCTGGAACAGCT
TCCATACTACGAGGAAGCCAATGGCAAGGGCGTCCGCCAGTTGGTGGCCA
TTTTCAAGAAGACCAATTTCACATTCGAAGCAGCAAGCTTTCTAGACC
BO12204.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:39:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17530-PA | 669 | GstE6-RA | 1..666 | 17..682 | 3330 | 100 | Plus |
CG17527-PA | 669 | GstE5-RA | 145..254 | 161..270 | 175 | 86.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:56:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE6-RA | 751 | CG17530-RA | 32..697 | 17..682 | 3330 | 100 | Plus |
GstE5-RA | 734 | CG17527-RA | 28..685 | 15..672 | 800 | 75 | Plus |
GstE7-RA | 765 | CG17531-RA | 169..642 | 154..627 | 495 | 74.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:56:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18406042..18406707 | 17..682 | 3330 | 100 | Plus |
2R | 25286936 | 2R | 18404632..18405289 | 15..672 | 800 | 74.8 | Plus |
2R | 25286936 | 2R | 18407092..18407565 | 154..627 | 480 | 73.4 | Plus |
2R | 25286936 | 2R | 18408003..18408344 | 160..501 | 390 | 74.3 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:56:33 has no hits.
BO12204.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:29:12 Download gff for
BO12204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-PA | 1..669 | 17..685 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:02:13 Download gff for
BO12204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17530-PA | 1..669 | 17..685 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:05:20 Download gff for
BO12204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 32..697 | 17..682 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:30:23 Download gff for
BO12204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 32..697 | 17..682 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:30:23 Download gff for
BO12204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18406042..18406707 | 17..682 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:05:20 Download gff for
BO12204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14293547..14294212 | 17..682 | 100 | | Plus |
BO12204.complete Sequence
700 bp assembled on 2006-10-11
GenBank Submission: FJ632356
> BO12204.complete
GAAGTTATCAGTCGACATGGTGAAATTGACTTTATACGGTTTGGACCCCA
GTCCCCCAGTTCGCGCTGTTAAGCTTACTTTGGCCGCTCTAAACCTAACC
TACGAATATGTAAACGTTGACATTGTGGCTCGTGCCCAACTTTCACCGGA
ATATCTGGAGAAGAATCCACAGCATACGGTGCCCACCCTGGAGGATGACG
GTCACTACATCTGGGATTCGCATGCCATTATTGCCTATTTGGTCTCGAAA
TATGCCGATTCCGATGCCCTATACCCGAAAGATCCTCTCAAGCGGGCTGT
TGTGGATCAGCGGCTGCACTTTGAATCCGGAGTGGTCTTTGCCAATGGCA
TAAGGAGCATATCGAAGTCAGTGCTCTTCCAGGGACAGACGAAAGTACCC
AAGGAGCGATACGATGCCATTATCGAGATCTACGATTTTGTGGAAACTTT
TCTCAAGGGACAGGATTACATTGCTGGCAATCAACTGACCATTGCGGATT
TCAGTCTCGTTTCATCGGTGGCCTCCCTTGAGGCCTTCGTGGCCTTGGAT
ACGACTAAGTATCCCAGGATCGGTGCTTGGATCAAAAAGCTGGAACAGCT
TCCATACTACGAGGAAGCCAATGGCAAGGGCGTCCGCCAGTTGGTGGCCA
TTTTCAAGAAGACCAATTTCACATTCGAAGCAGCAAGCTTTCTAGACCAT
BO12204.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:45:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE6-RA | 669 | CG17530-PA | 1..666 | 17..682 | 3330 | 100 | Plus |
GstE5-RA | 669 | CG17527-PA | 1..656 | 17..672 | 790 | 74.7 | Plus |
GstE7-RA | 672 | CG17531-PA | 138..611 | 154..627 | 480 | 73.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:45:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE6-RA | 751 | CG17530-RA | 32..697 | 17..682 | 3330 | 100 | Plus |
GstE5-RA | 734 | CG17527-RA | 28..685 | 15..672 | 800 | 74.8 | Plus |
GstE7-RA | 765 | CG17531-RA | 169..642 | 154..627 | 480 | 73.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:45:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18406042..18406707 | 17..682 | 3330 | 100 | Plus |
2R | 25286936 | 2R | 18404632..18405289 | 15..672 | 800 | 74.8 | Plus |
2R | 25286936 | 2R | 18407092..18407565 | 154..627 | 480 | 73.4 | Plus |
2R | 25286936 | 2R | 18408003..18408344 | 160..501 | 390 | 74.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 12:45:53 has no hits.
BO12204.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:39:56 Download gff for
BO12204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 1..669 | 17..685 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:02:30 Download gff for
BO12204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 30..695 | 17..682 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:33:34 Download gff for
BO12204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 32..697 | 17..684 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:39:56 Download gff for
BO12204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 30..695 | 17..682 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:04:03 Download gff for
BO12204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 32..697 | 17..684 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:04:03 Download gff for
BO12204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18406042..18406707 | 17..684 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:33:34 Download gff for
BO12204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14293547..14294212 | 17..684 | 99 | | Plus |
BO12204.pep Sequence
Translation from 16 to 700
> BO12204.pep
MVKLTLYGLDPSPPVRAVKLTLAALNLTYEYVNVDIVARAQLSPEYLEKN
PQHTVPTLEDDGHYIWDSHAIIAYLVSKYADSDALYPKDPLKRAVVDQRL
HFESGVVFANGIRSISKSVLFQGQTKVPKERYDAIIEIYDFVETFLKGQD
YIAGNQLTIADFSLVSSVASLEAFVALDTTKYPRIGAWIKKLEQLPYYEE
ANGKGVRQLVAIFKKTNFTFEAASFLDH
BO12204.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:53:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE6-PA | 222 | CG17530-PA | 1..222 | 1..222 | 1134 | 100 | Plus |
GstE5-PA | 222 | CG17527-PA | 1..220 | 1..220 | 884 | 75.5 | Plus |
GstE8-PB | 222 | CG17533-PB | 1..220 | 1..220 | 831 | 70.5 | Plus |
GstE8-PA | 222 | CG17533-PA | 1..220 | 1..220 | 831 | 70.5 | Plus |
GstE7-PA | 223 | CG17531-PA | 1..220 | 1..220 | 826 | 70 | Plus |