BO12259.3prime Sequence
616 bp (615 high quality bases) assembled on 2006-04-20
> BO12259.3prime
ATGGTCTAGAAAGCTTCACGAATGGTGGCGAACTTCTGAAAGTCGACCGT
TCCAAACTTGCCAAACAGTTCCAGAGGATAGTGCTTGCCCTCGACGGGCG
CATGGATGCGGATCTGGCGCATGTGGGTGTCCCTGCCATTCTGGTGGTTC
GAGATCACAGCAATCTGAAGCATGAAGGTGCGTATGGACTTGACGTTCCC
ATCCTTAATGGGTATCTGCACCCAGCCGGTGGGTTCGGTCAGGTCCATCA
CCTGCAGCTCCTGCAAGTCGTTGAAGTTCGTTCCAGATCGTATGGAGATC
CTTGATGGCGTGTAACTCTCGTCCAGCTTGTAATCCGTGTATATGTAAAT
CTGACTGATGTTCGTACGCTTGTGGAATTGAATGTTGACCAGGTGGGGAA
GCTGACCGTCCGACTGCCAATAAGTATCCATGATGTTGTCTCGCAAACGC
TCTACACCAAATCCCGGCTTGCAGGAGGAGAGGCTCCAAACAGCCTGCGC
GCCCACTTCCCGCACAAAGCCTAGGCGCTCCTCGGCCAGGGGGTCCTCTT
CGCTGCTTGGGGGCGGGTTGGCGGTTATATCCTCATCCATTGAGGCTGCC
ATGTCGACTGATAACT
BO12259.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:40:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11419-PA | 588 | CG11419-RA | 1..585 | 602..18 | 2925 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:25:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| APC10-RA | 867 | CG11419-RA | 78..662 | 602..18 | 2925 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:25:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17517466..17517912 | 18..464 | 2235 | 100 | Plus |
| 2R | 25286936 | 2R | 17517970..17518109 | 463..602 | 700 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:25:23 has no hits.
BO12259.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:30:48 Download gff for
BO12259.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11419-PA | 1..588 | 14..602 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:04:27 Download gff for
BO12259.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11419-PA | 1..588 | 14..602 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 03:54:58 Download gff for
BO12259.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| APC10-RA | 78..662 | 18..602 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 21:12:54 Download gff for
BO12259.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| APC10-RA | 78..662 | 18..602 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 21:12:54 Download gff for
BO12259.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17517466..17517911 | 18..463 | 100 | <- | Plus |
| 2R | 17517971..17518109 | 464..602 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 03:54:58 Download gff for
BO12259.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13404971..13405416 | 18..463 | 100 | <- | Plus |
| arm_2R | 13405476..13405614 | 464..602 | 100 | | Plus |
