Clone Sequence Records
BO12370.5prime Sequence
503 bp (502 high quality bases) assembled on 2006-04-20
> BO12370.5prime
GAAGTTATCAGTCGACATGAAGTACCGCATGTTGAATAAACGCAAACAGG
CGACTCCCTCGCCAGTAAGAGATTCCGACGCAGCCGACGTAGCCATGGCC
AACCACAGTGCTCTGGAACTGGAGGCGGCTGCGGCTCTCTTGTTGCTCCG
CTACCAATACGATCGACAAGTGTGCAATAACATTATAACCTACACGGAGT
CCTGTTCCCCGACTCCACCGCCGGCAGTTGCTGACAACACGACGCCAAAA
GATCAGACTGTTCGTCCGCCAGTCGCCAGCCAGCCGCTGAAGAAGCGCTC
CATACCATCGCACATCCTCCGCAGATCCCTGACTCCGGCCAAATCCGAGA
CTTCAGTGAGCAACAAGTCGATAGTCAAGGCCAAGACGAGGACTCCAATT
CCCAGTAAGGAGCGAAACTGCAACAGGACCTTGCTTAAGTCCTGCAGAAA
TATGATTCGAGAGTTTTTGGACAATCAGGAGTTTATCGCAAGCTTTCTAG
ACC
BO12370.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:42:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15382-PA | 474 | CG15382-RA | 1..471 | 17..487 | 2355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:26:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15382-RA | 1038 | CG15382-RA | 30..501 | 16..487 | 2360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:26:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2155782..2156253 | 16..487 | 2360 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 00:26:27 has no hits.
BO12370.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:33:55 Download gff for
BO12370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15382-PA | 1..474 | 17..491 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:08:57 Download gff for
BO12370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15382-PA | 1..474 | 17..491 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:43:45 Download gff for
BO12370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15382-RA | 21..504 | 9..491 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:05:55 Download gff for
BO12370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15382-RA | 21..504 | 9..491 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:05:55 Download gff for
BO12370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2155773..2156256 | 9..491 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:43:45 Download gff for
BO12370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2155773..2156256 | 9..491 | 98 | | Plus |
BO12370.3prime Sequence
503 bp (502 high quality bases) assembled on 2006-04-20
> BO12370.3prime
ATGGTCTAGAAAGCTTGCGATAAACTCCTGATTGTCCAAAAACTCTCGAA
TCATATTTCTGCAGGACTTAAGCAAGGTCCTGTTGCAGTTTCGCTCCTTA
CTGGGAATTGGAGTCCTCGTCTTGGCCTTGACTATCGACTTGTTGCTCAC
TGAAGTCTCGGATTTGGCCGGAGTCAGGGATCTGCGGAGGATGTGCGATG
GTATGGAGCGCTTCTTCAGCGGCTGGCTGGCGACTGGCGGACGAACAGTC
TGATCTTTTGGCGTCGTGTTGTCAGCAACTGCCGGCGGTGGAGTCGGGGA
ACAGGACTCCGTGTAGGTTATAATGTTATTGCACACTTGTCGATCGTATT
GGTAGCGGAGCAACAAGAGAGCCGCAGCCGCCTCCAGTTCCAGAGCACTG
TGGTTGGCCATGGCTACGTCGGCTGCGTCGGAATCTCTTACTGGCGAGGG
AGTCGCCTGTTTGCGTTTATTCAACATGCGGTACTTCATGTCGACTGATA
ACT
BO12370.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:42:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15382-PA | 474 | CG15382-RA | 1..471 | 489..19 | 2355 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:40:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15382-RA | 1038 | CG15382-RA | 30..501 | 490..19 | 2360 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:40:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2155782..2156253 | 490..19 | 2360 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:40:33 has no hits.
BO12370.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:33:54 Download gff for
BO12370.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15382-PA | 1..474 | 15..489 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:08:56 Download gff for
BO12370.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15382-PA | 1..474 | 15..489 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 05:07:32 Download gff for
BO12370.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15382-RA | 21..504 | 15..497 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:23:27 Download gff for
BO12370.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15382-RA | 21..504 | 15..497 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:23:27 Download gff for
BO12370.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2155773..2156256 | 15..497 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 05:07:32 Download gff for
BO12370.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2155773..2156256 | 15..497 | 98 | | Minus |
BO12370.complete Sequence
505 bp assembled on 2006-10-11
GenBank Submission: FJ632418
> BO12370.complete
GAAGTTATCAGTCGACATGAAGTACCGCATGTTGAATAAACGCAAACAGG
CGACTCCCTCGCCAGTAAGAGATTCCGACGCAGCCGACGTAGCCATGGCC
AACCACAGTGCTCTGGAACTGGAGGCGGCTGCGGCTCTCTTGTTGCTCCG
CTACCAATACGATCGACAAGTGTGCAATAACATTATAACCTACACGGAGT
CCTGTTCCCCGACTCCACCGCCGGCAGTTGCTGACAACACGACGCCAAAA
GATCAGACTGTTCGTCCGCCAGTCGCCAGCCAGCCGCTGAAGAAGCGCTC
CATACCATCGCACATCCTCCGCAGATCCCTGACTCCGGCCAAATCCGAGA
CTTCAGTGAGCAACAAGTCGATAGTCAAGGCCAAGACGAGGACTCCAATT
CCCAGTAAGGAGCGAAACTGCAACAGGACCTTGCTTAAGTCCTGCAGAAA
TATGATTCGAGAGTTTTTGGACAATCAGGAGTTTATCGCAAGCTTTCTAG
ACCAT
BO12370.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:11:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15382-RA | 474 | CG15382-PA | 1..471 | 17..487 | 2355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:11:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15382-RA | 1038 | CG15382-RA | 30..501 | 16..487 | 2360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:11:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2155782..2156253 | 16..487 | 2360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:11:16 has no hits.
BO12370.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:39:18 Download gff for
BO12370.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15382-RA | 1..474 | 17..491 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:01:42 Download gff for
BO12370.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15382-RA | 14..497 | 9..491 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:47:08 Download gff for
BO12370.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15382-RA | 31..501 | 17..489 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:39:18 Download gff for
BO12370.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15382-RA | 14..497 | 9..491 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:15:58 Download gff for
BO12370.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15382-RA | 31..501 | 17..489 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:15:58 Download gff for
BO12370.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2155783..2156253 | 17..489 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:47:08 Download gff for
BO12370.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2155783..2156253 | 17..489 | 99 | | Plus |
BO12370.pep Sequence
Translation from 16 to 505
> BO12370.pep
MKYRMLNKRKQATPSPVRDSDAADVAMANHSALELEAAAALLLLRYQYDR
QVCNNIITYTESCSPTPPPAVADNTTPKDQTVRPPVASQPLKKRSIPSHI
LRRSLTPAKSETSVSNKSIVKAKTRTPIPSKERNCNRTLLKSCRNMIREF
LDNQEFIASFLDH
BO12370.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:03:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15382-PA | 157 | CG15382-PA | 1..157 | 1..157 | 803 | 100 | Plus |
