Clone Sequence Records
BO12379.3prime Sequence
434 bp (433 high quality bases) assembled on 2006-04-20
> BO12379.3prime
ATGGTCTAGAAAGCTTGCGGCGCAGTAGTCCAGTATATCGTCGTAGGTGC
AGCCCTCCTTGCAACACTCGTGGGCGATGCGTCGCCGATGGCGTCGCAAC
TTTCGTCCACTTCCGACGGCCGGTGGCACACCCTTCTCCGTATCCGCATC
CGTATGCTTCTGCTTTAACCTTCCCGTTTCCGTTTCCTGTTCAATGTCCT
CATCCGGCTGCTGTAGCTTACGGATAAGGTCTCGCACTCTAGCATCCTTA
GACGCACTGCTCCGCCTGACACGGCGTGTAAATCCATTAACACAAATCAC
ATCCAGTGCCTGGATCAGAGCCTCGCCGCACATCTTTCGGCGTCCCTGGA
CCGGCTGCAGTAACTGCGACACGGTGGCCAGCAGGAGCAGCAGCGCCAGT
CCCAGTCTAATCAGGCTCATGTCGACTGATAACT
BO12379.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:43:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6736-PA | 405 | Ilp4-RA | 1..402 | 420..19 | 2010 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:15:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp4-RA | 804 | CG6736-RA | 151..552 | 420..19 | 2010 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 13:15:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9803651..9803887 | 19..255 | 1185 | 100 | Plus |
| 3L | 28110227 | 3L | 9803948..9804113 | 255..420 | 830 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-08 13:15:30 has no hits.
BO12379.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:34:12 Download gff for
BO12379.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp4-PA | 1..405 | 16..420 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:09:21 Download gff for
BO12379.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6736-PA | 1..405 | 16..420 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:44:16 Download gff for
BO12379.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp4-RA | 147..552 | 19..428 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 15:26:58 Download gff for
BO12379.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp4-RA | 147..552 | 19..428 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 15:26:58 Download gff for
BO12379.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9803948..9804117 | 255..428 | 97 | | Plus |
| 3L | 9803651..9803886 | 19..254 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:44:16 Download gff for
BO12379.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9796751..9796986 | 19..254 | 100 | <- | Plus |
| arm_3L | 9797048..9797217 | 255..428 | 97 | | Plus |
BO12379.5prime Sequence
434 bp (433 high quality bases) assembled on 2006-04-20
> BO12379.5prime
GAAGTTATCAGTCGACATGAGCCTGATTAGACTGGGACTGGCGCTGCTGC
TCCTGCTGGCCACCGTGTCGCAGTTACTGCAGCCGGTCCAGGGACGCCGA
AAGATGTGCGGCGAGGCTCTGATCCAGGCACTGGATGTGATTTGTGTTAA
TGGATTTACACGCCGTGTCAGGCGGAGCAGTGCGTCTAAGGATGCTAGAG
TGCGAGACCTTATCCGTAAGCTACAGCAGCCGGATGAGGACATTGAACAG
GAAACGGAAACGGGAAGGTTAAAGCAGAAGCATACGGATGCGGATACGGA
GAAGGGTGTGCCACCGGCCGTCGGAAGTGGACGAAAGTTGCGACGCCATC
GGCGACGCATCGCCCACGAGTGTTGCAAGGAGGGCTGCACCTACGACGAT
ATACTGGACTACTGCGCCGCAAGCTTTCTAGACC
BO12379.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:43:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6736-PA | 405 | Ilp4-RA | 1..402 | 17..418 | 2010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 01:47:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp4-RA | 804 | CG6736-RA | 151..552 | 17..418 | 2010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 01:47:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9803651..9803887 | 418..182 | 1185 | 100 | Minus |
| 3L | 28110227 | 3L | 9803948..9804113 | 182..17 | 830 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 01:47:15 has no hits.
BO12379.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:34:13 Download gff for
BO12379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp4-PA | 1..405 | 17..421 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:09:23 Download gff for
BO12379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6736-PA | 1..405 | 17..421 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:35:04 Download gff for
BO12379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp4-RA | 147..552 | 9..418 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:03:02 Download gff for
BO12379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp4-RA | 147..552 | 9..418 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:03:02 Download gff for
BO12379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9803651..9803886 | 183..418 | 100 | <- | Minus |
| 3L | 9803948..9804117 | 9..182 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:35:04 Download gff for
BO12379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9796751..9796986 | 183..418 | 100 | <- | Minus |
| arm_3L | 9797048..9797217 | 9..182 | 97 | | Minus |
BO12379.complete Sequence
436 bp assembled on 2006-10-11
GenBank Submission: FJ632422
> BO12379.complete
GAAGTTATCAGTCGACATGAGCCTGATTAGACTGGGACTGGCGCTGCTGC
TCCTGCTGGCCACCGTGTCGCAGTTACTGCAGCCGGTCCAGGGACGCCGA
AAGATGTGCGGCGAGGCTCTGATCCAGGCACTGGATGTGATTTGTGTTAA
TGGATTTACACGCCGTGTCAGGCGGAGCAGTGCGTCTAAGGATGCTAGAG
TGCGAGACCTTATCCGTAAGCTACAGCAGCCGGATGAGGACATTGAACAG
GAAACGGAAACGGGAAGGTTAAAGCAGAAGCATACGGATGCGGATACGGA
GAAGGGTGTGCCACCGGCCGTCGGAAGTGGACGAAAGTTGCGACGCCATC
GGCGACGCATCGCCCACGAGTGTTGCAAGGAGGGCTGCACCTACGACGAT
ATACTGGACTACTGCGCCGCAAGCTTTCTAGACCAT
BO12379.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:57:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp4-RA | 405 | CG6736-PA | 1..402 | 17..418 | 2010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:57:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp4-RA | 804 | CG6736-RA | 151..552 | 17..418 | 2010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:57:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9803651..9803887 | 418..182 | 1185 | 100 | Minus |
| 3L | 28110227 | 3L | 9803948..9804113 | 182..17 | 830 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:57:57 has no hits.
BO12379.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:39:21 Download gff for
BO12379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp4-RA | 1..405 | 17..421 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:01:46 Download gff for
BO12379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp4-RA | 162..567 | 9..418 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:42:16 Download gff for
BO12379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp4-RA | 151..552 | 17..420 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:39:21 Download gff for
BO12379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp4-RA | 162..567 | 9..418 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:47:11 Download gff for
BO12379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp4-RA | 151..552 | 17..420 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:47:11 Download gff for
BO12379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9803648..9803886 | 183..420 | 99 | <- | Minus |
| 3L | 9803948..9804113 | 17..182 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:42:16 Download gff for
BO12379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9796748..9796986 | 183..420 | 99 | <- | Minus |
| arm_3L | 9797048..9797213 | 17..182 | 100 | | Minus |
BO12379.pep Sequence
Translation from 16 to 436
> BO12379.pep
MSLIRLGLALLLLLATVSQLLQPVQGRRKMCGEALIQALDVICVNGFTRR
VRRSSASKDARVRDLIRKLQQPDEDIEQETETGRLKQKHTDADTEKGVPP
AVGSGRKLRRHRRRIAHECCKEGCTYDDILDYCAASFLDH
BO12379.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:03:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp4-PA | 134 | CG6736-PA | 1..134 | 1..134 | 688 | 100 | Plus |
