Clone Sequence Records
BO12383.3prime Sequence
845 bp (811 high quality bases) assembled on 2006-04-20
> BO12383.3prime
ATGGTCTAGAAAGCTTGCGTAGACAATGCCGGTGTGGTCGCGGATCCAGT
CCAGGTATCCGGTGACACGAGTGAATCCGGCGGGGCGGCCGGCGGTACAG
CCCTCTCCGCTGCCGAAGGATACGATGCCCACGATGCGGTTGTTATCGTG
CAGGACCAAGGGACCACCGGAGTCACCGCTGCAGGAGGACTTGCCGCCGT
CGGTGTTGATGCAGATGGTGTTGTCGGTGATGTAGTTGCTACCGTAGTAG
TTGCGGCAGTCGTTGTTGTCAATAATCTGGACATCGACGCAGTTCAGGTA
GTTGGACATGCCGCTGTTGTTGTCTGTCAGACCCCATCCAGAGGCCACTG
CCCACCAGCCGGAGTAGCTGTTGTAGCGATCGTTGTAGCTGGGCAACTCC
ACCTTGTTGACCAAGCTCCAGAAGTCCACGTGGGGGATGCGGATCAGAGC
GATGTCGTTGTTCAGGAAGTCGTTCCAGTCGGGATGTTGGATCATGTCGC
TGCGGCTCACCCAGTGGGTGTACTGGGCCTCGTGACGGAAGCTGGCTCCG
AAGTAGATGAGCACATGGTTAGCGCTGTTCGTGCAGTGGGCTGCGGTCAG
GACCCAGGTGTGGTCGATGATGGAACCCCCGCACCAGTAGCCGCCATCGT
TGAAGCTCAGTCCGACAATGTAGGGAATCTTGCCCTCGTAGGCCGGGTAT
CCATTGGTAATGCGACCCTCGATCTTGCCGGCGCGTGGCATGTCCTTCAC
TGGGACAGCCCTGGCGGACTCGGAGGGCACCACTCCGGCAGAGGCGACAG
CCAGACAGGCTAGGAAAACAAAGAGCTTCATGTCGACTGATAACT
BO12383.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:43:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8579-PA | 816 | Jon44E-RA | 1..813 | 831..19 | 4065 | 100 | Minus |
| CG31034-PA | 798 | Jon99Cii-RA | 362..450 | 461..373 | 195 | 88.7 | Minus |
| CG31362-PA | 798 | Jon99Ciii-RA | 362..450 | 461..373 | 195 | 88.7 | Minus |
| CG2229-PA | 804 | Jon99Fii-RA | 416..456 | 413..373 | 180 | 97.5 | Minus |
| CG31034-PA | 798 | Jon99Cii-RA | 748..788 | 66..26 | 180 | 97.5 | Minus |
| CG31362-PA | 798 | Jon99Ciii-RA | 748..788 | 66..26 | 180 | 97.5 | Minus |
| CG18030-PA | 804 | Jon99Fi-RA | 96..155 | 727..668 | 175 | 91.6 | Minus |
| CG2229-PA | 804 | Jon99Fii-RA | 751..794 | 69..26 | 170 | 95.4 | Minus |
| CG7118-PA | 783 | Jon66Ci-RA | 388..426 | 408..370 | 170 | 97.4 | Minus |
| CG7170-PA | 789 | Jon66Cii-RA | 400..438 | 408..370 | 170 | 97.4 | Minus |
| CG18030-PA | 804 | Jon99Fi-RA | 416..456 | 413..373 | 155 | 95.1 | Minus |
| CG2229-PA | 804 | Jon99Fii-RA | 607..666 | 213..154 | 150 | 90 | Minus |
| CG2229-PA | 804 | Jon99Fii-RA | 96..155 | 727..668 | 150 | 90 | Minus |
| CG8867-PA | 801 | Jon25Bi-RA | 415..454 | 408..369 | 150 | 95 | Minus |
| CG8867-PB | 801 | Jon25Bi-RB | 415..454 | 408..369 | 150 | 95 | Minus |
| CG18030-PA | 804 | Jon99Fi-RA | 751..794 | 69..26 | 145 | 93.1 | Minus |
| CG18030-PA | 804 | Jon99Fi-RA | 607..660 | 213..160 | 145 | 90.7 | Minus |
| CG6580-PA | 780 | Jon65Aii-RA | 335..378 | 461..418 | 145 | 93.1 | Minus |
| CG8867-PA | 801 | Jon25Bi-RA | 363..405 | 460..418 | 140 | 93 | Minus |
| CG8867-PB | 801 | Jon25Bi-RB | 363..405 | 460..418 | 140 | 93 | Minus |
| CG8869-PA | 831 | Jon25Bii-RA | 790..821 | 57..26 | 135 | 96.8 | Minus |
| CG8869-PA | 831 | Jon25Bii-RA | 114..170 | 724..668 | 135 | 89.4 | Minus |
| CG10475-PA | 789 | Jon65Ai-RA | 511..537 | 300..274 | 135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:46:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jon44E-RB | 1397 | CG8579-RB | 20..834 | 833..19 | 4075 | 100 | Minus |
| Jon44E-RA | 900 | CG8579-RA | 20..834 | 833..19 | 4075 | 100 | Minus |
| Jon99Cii-RA | 862 | CG31034-RA | 126..816 | 719..26 | 785 | 75.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:46:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8691467..8692281 | 833..19 | 4075 | 100 | Minus |
| 3R | 32079331 | 3R | 29924097..29924490 | 332..719 | 670 | 79.2 | Plus |
| 3R | 32079331 | 3R | 29922339..29922732 | 719..332 | 640 | 78.7 | Minus |
| 3R | 32079331 | 3R | 30487407..30487808 | 332..727 | 605 | 77.9 | Plus |
| 3R | 32079331 | 3R | 30489083..30489484 | 727..332 | 605 | 77.9 | Minus |
| 2L | 23513712 | 2L | 4954627..4955031 | 326..727 | 520 | 75.8 | Plus |
| 3R | 32079331 | 3R | 29922829..29923029 | 226..26 | 255 | 75.1 | Minus |
| 3R | 32079331 | 3R | 29923800..29924000 | 26..226 | 255 | 75.1 | Plus |
| 3R | 32079331 | 3R | 30487110..30487310 | 26..226 | 255 | 75.1 | Plus |
| 3R | 32079331 | 3R | 30489581..30489652 | 226..155 | 225 | 87.5 | Minus |
Blast to na_te.dros performed 2015-02-10 20:46:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2799..2996 | 391..191 | 168 | 56.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2535 | 391..178 | 163 | 55.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2339..2464 | 323..192 | 160 | 60.6 | Minus |
BO12383.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:34:21 Download gff for
BO12383.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8579-PA | 1..816 | 15..831 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:09:33 Download gff for
BO12383.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8579-PA | 1..816 | 15..831 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:52:34 Download gff for
BO12383.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon44E-RA | 20..838 | 14..833 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:52:19 Download gff for
BO12383.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon44E-RA | 20..838 | 14..833 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:52:19 Download gff for
BO12383.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8691467..8692280 | 20..833 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:52:34 Download gff for
BO12383.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4578972..4579785 | 20..833 | 100 | <- | Minus |
BO12383.5prime Sequence
845 bp (844 high quality bases) assembled on 2006-04-20
> BO12383.5prime
GAAGTTATCAGTCGACATGAAGCTCTTTGTTTTCCTAGCCTGTCTGGCTG
TCGCCTCTGCCGGAGTGGTGCCCTCCGAGTCCGCCAGGGCTGTCCCAGTG
AAGGACATGCCACGCGCCGGCAAGATCGAGGGTCGCATTACCAATGGATA
CCCGGCCTACGAGGGCAAGATTCCCTACATTGTCGGACTGAGCTTCAACG
ATGGCGGCTACTGGTGCGGGGGTTCCATCATCGACCACACCTGGGTCCTG
ACCGCAGCCCACTGCACGAACAGCGCTAACCATGTGCTCATCTACTTCGG
AGCCAGCTTCCGTCACGAGGCCCAGTACACCCACTGGGTGAGCCGCAGCG
ACATGATCCAACATCCCGACTGGAACGACTTCCTGAACAACGACATCGCT
CTGATCCGCATCCCCCACGTGGACTTCTGGAGCTTGGTCAACAAGGTGGA
GTTGCCCAGCTACAACGATCGCTACAACAGCTACTCCGGCTGGTGGGCAG
TGGCCTCTGGATGGGGTCTGACAGACAACAACAGCGGCATGTCCAACTAC
CTGAACTGCGTCGATGTCCAGATTATTGACAACAACGACTGCCGCAACTA
CTACGGTAGCAACTACATCACCGACAACACCATCTGCATCAACACCGACG
GCGGCAAGTCCTCCTGCAGCGGTGACTCCGGTGGTCCCTTGGTCCTGCAC
GATAACAACCGCATCGTGGGCATCGTATCCTTCGGCAGCGGAGAGGGCTG
TACCGCCGGCCGCCCCGCCGGATTCACTCGTGTCACCGGATACCTGGACT
GGATCCGCGACCACACCGGCATTGTCTACGCAAGCTTTCTAGACC
BO12383.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:43:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8579-PA | 816 | Jon44E-RA | 1..813 | 17..829 | 4065 | 100 | Plus |
| CG31034-PA | 798 | Jon99Cii-RA | 362..450 | 387..475 | 195 | 88.7 | Plus |
| CG31362-PA | 798 | Jon99Ciii-RA | 362..450 | 387..475 | 195 | 88.7 | Plus |
| CG2229-PA | 804 | Jon99Fii-RA | 416..456 | 435..475 | 180 | 97.5 | Plus |
| CG31034-PA | 798 | Jon99Cii-RA | 748..788 | 782..822 | 180 | 97.5 | Plus |
| CG31362-PA | 798 | Jon99Ciii-RA | 748..788 | 782..822 | 180 | 97.5 | Plus |
| CG18030-PA | 804 | Jon99Fi-RA | 96..155 | 121..180 | 175 | 91.6 | Plus |
| CG2229-PA | 804 | Jon99Fii-RA | 751..794 | 779..822 | 170 | 95.4 | Plus |
| CG7118-PA | 783 | Jon66Ci-RA | 388..426 | 440..478 | 170 | 97.4 | Plus |
| CG7170-PA | 789 | Jon66Cii-RA | 400..438 | 440..478 | 170 | 97.4 | Plus |
| CG18030-PA | 804 | Jon99Fi-RA | 416..456 | 435..475 | 155 | 95.1 | Plus |
| CG2229-PA | 804 | Jon99Fii-RA | 96..155 | 121..180 | 150 | 90 | Plus |
| CG2229-PA | 804 | Jon99Fii-RA | 607..666 | 635..694 | 150 | 90 | Plus |
| CG8867-PA | 801 | Jon25Bi-RA | 415..454 | 440..479 | 150 | 95 | Plus |
| CG8867-PB | 801 | Jon25Bi-RB | 415..454 | 440..479 | 150 | 95 | Plus |
| CG18030-PA | 804 | Jon99Fi-RA | 751..794 | 779..822 | 145 | 93.1 | Plus |
| CG18030-PA | 804 | Jon99Fi-RA | 607..660 | 635..688 | 145 | 90.7 | Plus |
| CG6580-PA | 780 | Jon65Aii-RA | 335..378 | 387..430 | 145 | 93.1 | Plus |
| CG8867-PA | 801 | Jon25Bi-RA | 363..405 | 388..430 | 140 | 93 | Plus |
| CG8867-PB | 801 | Jon25Bi-RB | 363..405 | 388..430 | 140 | 93 | Plus |
| CG8869-PA | 831 | Jon25Bii-RA | 790..821 | 791..822 | 135 | 96.8 | Plus |
| CG8869-PA | 831 | Jon25Bii-RA | 114..170 | 124..180 | 135 | 89.4 | Plus |
| CG10475-PA | 789 | Jon65Ai-RA | 511..537 | 548..574 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:42:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jon44E-RB | 1397 | CG8579-RB | 20..834 | 15..829 | 4075 | 100 | Plus |
| Jon44E-RA | 900 | CG8579-RA | 20..834 | 15..829 | 4075 | 100 | Plus |
| Jon99Cii-RA | 862 | CG31034-RA | 126..816 | 129..822 | 785 | 75.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:42:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8691467..8692281 | 15..829 | 4075 | 100 | Plus |
| 3R | 32079331 | 3R | 29924097..29924490 | 516..129 | 670 | 79.2 | Minus |
| 3R | 32079331 | 3R | 29922339..29922732 | 129..516 | 640 | 78.7 | Plus |
| 3R | 32079331 | 3R | 30487407..30487808 | 516..121 | 605 | 77.9 | Minus |
| 3R | 32079331 | 3R | 30489083..30489484 | 121..516 | 605 | 77.9 | Plus |
| 2L | 23513712 | 2L | 4954627..4955031 | 522..121 | 520 | 75.8 | Minus |
| 3R | 32079331 | 3R | 29922829..29923029 | 622..822 | 255 | 75.1 | Plus |
| 3R | 32079331 | 3R | 29923800..29924000 | 822..622 | 255 | 75.1 | Minus |
| 3R | 32079331 | 3R | 30487110..30487310 | 822..622 | 255 | 75.1 | Minus |
| 3R | 32079331 | 3R | 30489581..30489652 | 622..693 | 225 | 87.5 | Plus |
Blast to na_te.dros performed 2015-02-12 19:42:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2799..2996 | 457..657 | 168 | 56.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2535 | 457..670 | 163 | 55.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2339..2464 | 525..656 | 160 | 60.6 | Plus |
BO12383.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:34:22 Download gff for
BO12383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8579-PA | 1..816 | 17..833 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:09:35 Download gff for
BO12383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8579-PA | 1..816 | 17..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:20:11 Download gff for
BO12383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon44E-RA | 20..838 | 15..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:42:46 Download gff for
BO12383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon44E-RA | 20..838 | 15..834 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:42:46 Download gff for
BO12383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8691467..8692280 | 15..828 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:20:11 Download gff for
BO12383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4578972..4579785 | 15..828 | 100 | <- | Plus |
BO12383.complete Sequence
847 bp assembled on 2006-10-11
GenBank Submission: FJ632425
> BO12383.complete
GAAGTTATCAGTCGACATGAAGCTCTTTGTTTTCCTAGCCTGTCTGGCTG
TCGCCTCTGCCGGAGTGGTGCCCTCCGAGTCCGCCAGGGCTGTCCCAGTG
AAGGACATGCCACGCGCCGGCAAGATCGAGGGTCGCATTACCAATGGATA
CCCGGCCTACGAGGGCAAGATTCCCTACATTGTCGGACTGAGCTTCAACG
ATGGCGGCTACTGGTGCGGGGGTTCCATCATCGACCACACCTGGGTCCTG
ACCGCAGCCCACTGCACGAACAGCGCTAACCATGTGCTCATCTACTTCGG
AGCCAGCTTCCGTCACGAGGCCCAGTACACCCACTGGGTGAGCCGCAGCG
ACATGATCCAACATCCCGACTGGAACGACTTCCTGAACAACGACATCGCT
CTGATCCGCATCCCCCACGTGGACTTCTGGAGCTTGGTCAACAAGGTGGA
GTTGCCCAGCTACAACGATCGCTACAACAGCTACTCCGGCTGGTGGGCAG
TGGCCTCTGGATGGGGTCTGACAGACAACAACAGCGGCATGTCCAACTAC
CTGAACTGCGTCGATGTCCAGATTATTGACAACAACGACTGCCGCAACTA
CTACGGTAGCAACTACATCACCGACAACACCATCTGCATCAACACCGACG
GCGGCAAGTCCTCCTGCAGCGGTGACTCCGGTGGTCCCTTGGTCCTGCAC
GATAACAACCGCATCGTGGGCATCGTATCCTTCGGCAGCGGAGAGGGCTG
TACCGCCGGCCGCCCCGCCGGATTCACTCGTGTCACCGGATACCTGGACT
GGATCCGCGACCACACCGGCATTGTCTACGCAAGCTTTCTAGACCAT
BO12383.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:46:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jon44E-RB | 816 | CG8579-PB | 1..813 | 17..829 | 4065 | 100 | Plus |
| Jon44E-RA | 816 | CG8579-PA | 1..813 | 17..829 | 4065 | 100 | Plus |
| Jon99Cii-RA | 798 | CG31034-PA | 98..491 | 129..516 | 670 | 79.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:46:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jon44E-RB | 1397 | CG8579-RB | 20..834 | 15..829 | 4075 | 100 | Plus |
| Jon44E-RA | 900 | CG8579-RA | 20..834 | 15..829 | 4075 | 100 | Plus |
| Jon99Cii-RA | 862 | CG31034-RA | 126..519 | 129..516 | 670 | 79.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:46:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8691467..8692281 | 15..829 | 4075 | 100 | Plus |
| 3R | 32079331 | 3R | 29924097..29924490 | 516..129 | 670 | 79.2 | Minus |
| 3R | 32079331 | 3R | 29922339..29922732 | 129..516 | 640 | 78.7 | Plus |
| 3R | 32079331 | 3R | 30487407..30487808 | 516..121 | 605 | 77.9 | Minus |
| 3R | 32079331 | 3R | 30489083..30489484 | 121..516 | 605 | 77.9 | Plus |
| 2L | 23513712 | 2L | 4954627..4955031 | 522..121 | 520 | 75.8 | Minus |
| 2L | 23513712 | 2L | 4952294..4953008 | 822..117 | 475 | 71.7 | Minus |
| 3L | 28110227 | 3L | 6052746..6053182 | 387..823 | 415 | 73 | Plus |
| 3L | 28110227 | 3L | 8391897..8392142 | 392..637 | 360 | 76.4 | Plus |
| 3L | 28110227 | 3L | 6053724..6054062 | 736..392 | 340 | 73.9 | Minus |
| 2L | 23513712 | 2L | 4950281..4950403 | 517..395 | 315 | 83.7 | Minus |
| 3L | 28110227 | 3L | 8393171..8393296 | 516..391 | 315 | 83.3 | Minus |
| 3R | 32079331 | 3R | 29922829..29923029 | 622..822 | 255 | 75.1 | Plus |
| 3R | 32079331 | 3R | 29923800..29924000 | 822..622 | 255 | 75.1 | Minus |
| 3R | 32079331 | 3R | 30487110..30487310 | 822..622 | 255 | 75.1 | Minus |
| 3R | 32079331 | 3R | 30489581..30489652 | 622..693 | 225 | 87.5 | Plus |
| 3L | 28110227 | 3L | 8391650..8391792 | 121..266 | 215 | 78.1 | Plus |
Blast to na_te.dros performed 2014-11-28 00:46:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2799..2996 | 457..657 | 168 | 56.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2535 | 457..670 | 163 | 55.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2339..2464 | 525..656 | 160 | 60.6 | Plus |
BO12383.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:53:49 Download gff for
BO12383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon44E-RA | 1..816 | 17..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:26:03 Download gff for
BO12383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon44E-RA | 18..836 | 15..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:59:16 Download gff for
BO12383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon44E-RA | 22..834 | 17..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:53:49 Download gff for
BO12383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon44E-RA | 18..836 | 15..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:26:21 Download gff for
BO12383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon44E-RA | 22..834 | 17..831 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:26:21 Download gff for
BO12383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8691469..8692281 | 17..831 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:59:16 Download gff for
BO12383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4578974..4579786 | 17..831 | 99 | | Plus |
BO12383.pep Sequence
Translation from 16 to 847
> BO12383.pep
MKLFVFLACLAVASAGVVPSESARAVPVKDMPRAGKIEGRITNGYPAYEG
KIPYIVGLSFNDGGYWCGGSIIDHTWVLTAAHCTNSANHVLIYFGASFRH
EAQYTHWVSRSDMIQHPDWNDFLNNDIALIRIPHVDFWSLVNKVELPSYN
DRYNSYSGWWAVASGWGLTDNNSGMSNYLNCVDVQIIDNNDCRNYYGSNY
ITDNTICINTDGGKSSCSGDSGGPLVLHDNNRIVGIVSFGSGEGCTAGRP
AGFTRVTGYLDWIRDHTGIVYASFLDH
BO12383.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:38:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jon44E-PB | 271 | CG8579-PB | 1..271 | 1..271 | 1500 | 100 | Plus |
| Jon44E-PA | 271 | CG8579-PA | 1..271 | 1..271 | 1500 | 100 | Plus |
| Jon99Ciii-PB | 265 | CG31362-PB | 1..265 | 1..271 | 916 | 64.7 | Plus |
| Jon99Ciii-PA | 265 | CG31362-PA | 1..265 | 1..271 | 916 | 64.7 | Plus |
| Jon99Cii-PA | 265 | CG31034-PA | 1..265 | 1..271 | 916 | 64.7 | Plus |
