Clone Sequence Records
BO12393.5prime Sequence
479 bp (478 high quality bases) assembled on 2006-04-20
> BO12393.5prime
GAAGTTATCAGTCGACATGTGGCCGCCCAAGCACGCCCACATTGGCTGGC
TTTCAAGCCTTGCTCTCGTCGTTCTCCTGATGAGCCTGCAAATGGTAATG
GTATCGGGGATCGAGTGCTACGTGTGCGACACGAGCGATACGGAGCATCC
GTTCCAGTGCGGCGAGTGGTTCGAGCGATACGACATACCGGACATTCAAC
CCCAAAATTGTTCCAGTGTCCATGGCGCCCAGTTCTGTGTGAAGCACGTG
GGTCGTTTTGAGGGTGGAATCGGGGCGAAGAGGTTCTGCAGTTCGAAGGA
CATGGGCAACTATTGTGACTATGTGCGAAACAAGGGCGATCGCATGGACT
ATCGCAGCTGCATTTACACTTGTGATACGGACGGTTGCAATGCCGCTGGA
AGGCTGGAACTGGAATGGGGCGTGGCAGCGGCCCTCCTCACTCTCACATG
GCTCTTACGGCACGCAAGCTTTCTAGACC
BO12393.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:43:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14430-PA | 450 | CG14430-RA | 1..447 | 17..463 | 2235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:32:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bou-RA | 703 | CG14430-RA | 93..540 | 16..463 | 2240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:31:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6986578..6987025 | 16..463 | 2240 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 02:31:59 has no hits.
BO12393.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:34:42 Download gff for
BO12393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14430-PA | 1..450 | 17..466 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:10:04 Download gff for
BO12393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14430-PA | 1..450 | 17..466 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:12:33 Download gff for
BO12393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bou-RA | 87..546 | 11..469 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:38:09 Download gff for
BO12393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bou-RA | 88..547 | 11..469 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 06:38:09 Download gff for
BO12393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6986573..6987032 | 11..469 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:12:33 Download gff for
BO12393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6880606..6881065 | 11..469 | 98 | | Plus |
BO12393.3prime Sequence
479 bp (478 high quality bases) assembled on 2006-04-20
> BO12393.3prime
ATGGTCTAGAAAGCTTGCGTGCCGTAAGAGCCATGTGAGAGTGAGGAGGG
CCGCTGCCACGCCCCATTCCAGTTCCAGCCTTCCAGCGGCATTGCAACCG
TCCGTATCACAAGTGTAAATGCAGCTGCGATAGTCCATGCGATCGCCCTT
GTTTCGCACATAGTCACAATAGTTGCCCATGTCCTTCGAACTGCAGAACC
TCTTCGCCCCGATTCCACCCTCAAAACGACCCACGTGCTTCACACAGAAC
TGGGCGCCATGGACACTGGAACAATTTTGGGGTTGAATGTCCGGTATGTC
GTATCGCTCGAACCACTCGCCGCACTGGAACGGATGCTCCGTATCGCTCG
TGTCGCACACGTAGCACTCGATCCCCGATACCATTACCATTTGCAGGCTC
ATCAGGAGAACGACGAGAGCAAGGCTTGAAAGCCAGCCAATGTGGGCGTG
CTTGGGCGGCCACATGTCGACTGATAACT
BO12393.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:43:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14430-PA | 450 | CG14430-RA | 1..447 | 465..19 | 2235 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 12:54:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bou-RA | 703 | CG14430-RA | 93..540 | 466..19 | 2240 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 12:54:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6986578..6987025 | 466..19 | 2240 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-06 12:54:19 has no hits.
BO12393.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:34:41 Download gff for
BO12393.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14430-PA | 1..450 | 16..465 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:10:02 Download gff for
BO12393.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14430-PA | 1..450 | 16..465 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 07:05:20 Download gff for
BO12393.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bou-RA | 87..546 | 13..471 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:44:57 Download gff for
BO12393.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bou-RA | 88..547 | 13..471 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:44:57 Download gff for
BO12393.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6986573..6987032 | 13..471 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 07:05:20 Download gff for
BO12393.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6880606..6881065 | 13..471 | 98 | | Minus |
BO12393.complete Sequence
481 bp assembled on 2006-10-11
GenBank Submission: FJ632429
> BO12393.complete
GAAGTTATCAGTCGACATGTGGCCGCCCAAGCACGCCCACATTGGCTGGC
TTTCAAGCCTTGCTCTCGTCGTTCTCCTGATGAGCCTGCAAATGGTAATG
GTATCGGGGATCGAGTGCTACGTGTGCGACACGAGCGATACGGAGCATCC
GTTCCAGTGCGGCGAGTGGTTCGAGCGATACGACATACCGGACATTCAAC
CCCAAAATTGTTCCAGTGTCCATGGCGCCCAGTTCTGTGTGAAGCACGTG
GGTCGTTTTGAGGGTGGAATCGGGGCGAAGAGGTTCTGCAGTTCGAAGGA
CATGGGCAACTATTGTGACTATGTGCGAAACAAGGGCGATCGCATGGACT
ATCGCAGCTGCATTTACACTTGTGATACGGACGGTTGCAATGCCGCTGGA
AGGCTGGAACTGGAATGGGGCGTGGCAGCGGCCCTCCTCACTCTCACATG
GCTCTTACGGCACGCAAGCTTTCTAGACCAT
BO12393.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:24:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bou-RA | 450 | CG14430-PA | 1..447 | 17..463 | 2235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:24:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bou-RA | 703 | CG14430-RA | 93..540 | 16..463 | 2240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:24:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6986578..6987025 | 16..463 | 2240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:24:25 has no hits.
BO12393.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:39:09 Download gff for
BO12393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14430-RA | 1..450 | 17..466 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:01:27 Download gff for
BO12393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14430-RA | 84..543 | 11..469 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:40:37 Download gff for
BO12393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bou-RA | 93..539 | 17..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:39:09 Download gff for
BO12393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14430-RA | 84..543 | 11..469 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:06:54 Download gff for
BO12393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bou-RA | 94..540 | 17..465 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:06:54 Download gff for
BO12393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6986579..6987025 | 17..465 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:40:37 Download gff for
BO12393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6880612..6881058 | 17..465 | 99 | | Plus |
BO12393.pep Sequence
Translation from 16 to 481
> BO12393.pep
MWPPKHAHIGWLSSLALVVLLMSLQMVMVSGIECYVCDTSDTEHPFQCGE
WFERYDIPDIQPQNCSSVHGAQFCVKHVGRFEGGIGAKRFCSSKDMGNYC
DYVRNKGDRMDYRSCIYTCDTDGCNAAGRLELEWGVAAALLTLTWLLRHA
SFLDH
BO12393.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:52:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bou-PA | 149 | CG14430-PA | 1..149 | 1..149 | 839 | 100 | Plus |
