Clone Sequence Records
BO12515.5prime Sequence
512 bp (511 high quality bases) assembled on 2006-05-08
> BO12515.5prime
GAAGTTATCAGTCGACATGTTAACAAAGATGTTCCTAGTGCTCTGCCTGG
TGCTGGGCATCATGGCATCGGTATCCGGACAGCCACACGCCCGTGCCAGC
GATCTCTACTATACGGACATAACGCCCGTGACCGACGAAACACGCTACAC
CACCCTCAATCCGGACGCACAGCTGAACGAGATGAACAAGGTGAAGCACT
CGAAGGGCAACGTGGTCTTCACCGCGGGAAAGCGGGCATCGGGTGACCGA
CTCATTGTGAACCACTACGATGACGACAGCTTTCCCAGTGCCAAGGATGT
GGAGGTGCTCATGAGCTATCCGGCCGGAGCCAGCACAGGGGTCACGCTGA
CGAGCATCGAGGTGTATGTGGACATGACGGCGGACGATGCCGGTGGCTAT
CTGACCAAGGGTGGCATCGGTCAGACCAACGTGGAGATTCTGCTGACCTC
CAATCAGACGCGCAGCTTCGTCTACGAGACGTTCATCTATGGGTACGCAA
GCTTTCTAGACC
BO12515.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:45:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15044-PA | 483 | CG15044-RA | 1..480 | 17..496 | 2400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:24:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15044-RA | 822 | CG15044-RA | 116..595 | 17..496 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:24:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18491412..18491891 | 496..17 | 2400 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:24:25 has no hits.
BO12515.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:37:56 Download gff for
BO12515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-PA | 1..483 | 17..497 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:14:31 Download gff for
BO12515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-PA | 1..483 | 17..497 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:21:46 Download gff for
BO12515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-RA | 113..595 | 11..496 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:25:00 Download gff for
BO12515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-RA | 113..595 | 11..496 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:25:00 Download gff for
BO12515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18491412..18491894 | 11..496 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:21:46 Download gff for
BO12515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18385445..18385927 | 11..496 | 99 | | Minus |
BO12515.3prime Sequence
512 bp (511 high quality bases) assembled on 2006-05-08
> BO12515.3prime
ATGGTCTAGAAAGCTTGCGTACCCATAGATGAACGTCTCGTAGACGAAGC
TGCGCGTCTGATTGGAGGTCAGCAGAATCTCCACGTTGGTCTGACCGATG
CCACCCTTGGTCAGATAGCCACCGGCATCGTCCGCCGTCATGTCCACATA
CACCTCGATGCTCGTCAGCGTGACCCCTGTGCTGGCTCCGGCCGGATAGC
TCATGAGCACCTCCACATCCTTGGCACTGGGAAAGCTGTCGTCATCGTAG
TGGTTCACAATGAGTCGGTCACCCGATGCCCGCTTTCCCGCGGTGAAGAC
CACGTTGCCCTTCGAGTGCTTCACCTTGTTCATCTCGTTCAGCTGTGCGT
CCGGATTGAGGGTGGTGTAGCGTGTTTCGTCGGTCACGGGCGTTATGTCC
GTATAGTAGAGATCGCTGGCACGGGCGTGTGGCTGTCCGGATACCGATGC
CATGATGCCCAGCACCAGGCAGAGCACTAGGAACATCTTTGTTAACATGT
CGACTGATAACT
BO12515.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:45:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15044-PA | 483 | CG15044-RA | 1..480 | 498..19 | 2400 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:13:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15044-RA | 822 | CG15044-RA | 116..595 | 498..19 | 2400 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 12:13:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18491412..18491891 | 19..498 | 2400 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-31 12:13:09 has no hits.
BO12515.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:37:55 Download gff for
BO12515.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-PA | 1..483 | 18..498 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:14:30 Download gff for
BO12515.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-PA | 1..483 | 18..498 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:57:26 Download gff for
BO12515.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-RA | 113..595 | 19..504 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 13:02:41 Download gff for
BO12515.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-RA | 113..595 | 19..504 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 13:02:41 Download gff for
BO12515.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18491412..18491894 | 19..504 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:57:26 Download gff for
BO12515.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18385445..18385927 | 19..504 | 99 | | Plus |
BO12515.complete Sequence
514 bp assembled on 2006-10-11
GenBank Submission: FJ632464
> BO12515.complete
GAAGTTATCAGTCGACATGTTAACAAAGATGTTCCTAGTGCTCTGCCTGG
TGCTGGGCATCATGGCATCGGTATCCGGACAGCCACACGCCCGTGCCAGC
GATCTCTACTATACGGACATAACGCCCGTGACCGACGAAACACGCTACAC
CACCCTCAATCCGGACGCACAGCTGAACGAGATGAACAAGGTGAAGCACT
CGAAGGGCAACGTGGTCTTCACCGCGGGAAAGCGGGCATCGGGTGACCGA
CTCATTGTGAACCACTACGATGACGACAGCTTTCCCAGTGCCAAGGATGT
GGAGGTGCTCATGAGCTATCCGGCCGGAGCCAGCACAGGGGTCACGCTGA
CGAGCATCGAGGTGTATGTGGACATGACGGCGGACGATGCCGGTGGCTAT
CTGACCAAGGGTGGCATCGGTCAGACCAACGTGGAGATTCTGCTGACCTC
CAATCAGACGCGCAGCTTCGTCTACGAGACGTTCATCTATGGGTACGCAA
GCTTTCTAGACCAT
BO12515.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:22:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15044-RA | 483 | CG15044-PA | 1..480 | 17..496 | 2400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:22:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15044-RA | 822 | CG15044-RA | 116..595 | 17..496 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:22:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18491412..18491891 | 496..17 | 2400 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:22:15 has no hits.
BO12515.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:59:12 Download gff for
BO12515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-RA | 1..483 | 17..497 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:31:14 Download gff for
BO12515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-RA | 103..585 | 11..496 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:13:19 Download gff for
BO12515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-RA | 121..595 | 22..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:59:12 Download gff for
BO12515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-RA | 103..585 | 11..496 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:09:13 Download gff for
BO12515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-RA | 121..595 | 22..498 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:09:13 Download gff for
BO12515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18491410..18491886 | 22..498 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:13:19 Download gff for
BO12515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18385443..18385919 | 22..498 | 99 | | Minus |
BO12515.pep Sequence
Translation from 16 to 514
> BO12515.pep
MLTKMFLVLCLVLGIMASVSGQPHARASDLYYTDITPVTDETRYTTLNPD
AQLNEMNKVKHSKGNVVFTAGKRASGDRLIVNHYDDDSFPSAKDVEVLMS
YPAGASTGVTLTSIEVYVDMTADDAGGYLTKGGIGQTNVEILLTSNQTRS
FVYETFIYGYASFLDH
BO12515.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:19:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15044-PA | 160 | CG15044-PA | 1..160 | 1..160 | 821 | 100 | Plus |
| CG15043-PB | 163 | CG15043-PB | 7..161 | 7..159 | 153 | 25.8 | Plus |
| CG15043-PA | 163 | CG15043-PA | 7..161 | 7..159 | 153 | 25.8 | Plus |
