Clone Sequence Records
BO12532.3prime Sequence
350 bp (349 high quality bases) assembled on 2006-05-08
> BO12532.3prime
ATGGTCTAGAAAGCTTGCCTGGCTGCTCCGCTTGATGCGCTCGACATGCA
GGTCGTACAGCATCTTGTTCTTCTCGTAGTAAAATGGGTTTTGTTCGGCT
CCCAGTTCTGGGTTGTATTCGTATCCGGCCGCCACACCGTTTCCGGCTGC
ATCGGACCCGCCGGATCCACCAGTCGCTCCTCCTCCCGACAGTGGCGGAA
TGCTGCAGCTGCTGCTGCTGCTGCTGTTCCCATCCTCGTAGTTCAGATTC
AGGTTGTTGATGCGCTTCGAAAGGGGCGACTCGCAGGCCAGTTCATCCTC
CCGGCTGCGCTTTCTTGTCTTCAGGAATCCAGCCATGTCGACTGATAACT
BO12532.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:46:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14229-PA | 321 | CG14229-RA | 1..318 | 336..19 | 1590 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:23:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14229-RB | 1018 | CG14229-RB | 108..425 | 336..19 | 1590 | 100 | Minus |
| CG14229-RC | 989 | CG14229-RC | 300..617 | 336..19 | 1590 | 100 | Minus |
| CG14229-RA | 797 | CG14229-RA | 108..425 | 336..19 | 1590 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:23:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19694570..19694866 | 19..315 | 1485 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 15:23:51 has no hits.
BO12532.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:38:28 Download gff for
BO12532.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-PA | 1..321 | 18..336 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:15:13 Download gff for
BO12532.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-PA | 1..321 | 18..336 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 21:29:00 Download gff for
BO12532.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-RA | 102..430 | 12..346 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:51:58 Download gff for
BO12532.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-RA | 102..430 | 12..346 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:51:58 Download gff for
BO12532.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19694565..19694864 | 12..313 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:29:00 Download gff for
BO12532.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19588598..19588897 | 12..313 | 99 | <- | Plus |
BO12532.5prime Sequence
350 bp (349 high quality bases) assembled on 2006-05-08
> BO12532.5prime
GAAGTTATCAGTCGACATGGCTGGATTCCTGAAGACAAGAAAGCGCAGCC
GGGAGGATGAACTGGCCTGCGAGTCGCCCCTTTCGAAGCGCATCAACAAC
CTGAATCTGAACTACGAGGATGGGAACAGCAGCAGCAGCAGCAGCTGCAG
CATTCCGCCACTGTCGGGAGGAGGAGCGACTGGTGGATCCGGCGGGTCCG
ATGCAGCCGGAAACGGTGTGGCGGCCGGATACGAATACAACCCAGAACTG
GGAGCCGAACAAAACCCATTTTACTACGAGAAGAACAAGATGCTGTACGA
CCTGCATGTCGAGCGCATCAAGCGGAGCAGCCAGGCAAGCTTTCTAGACC
BO12532.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:46:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14229-PA | 321 | CG14229-RA | 1..318 | 17..334 | 1590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:07:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14229-RB | 1018 | CG14229-RB | 108..425 | 17..334 | 1590 | 100 | Plus |
| CG14229-RC | 989 | CG14229-RC | 300..617 | 17..334 | 1590 | 100 | Plus |
| CG14229-RA | 797 | CG14229-RA | 108..425 | 17..334 | 1590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:07:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19694570..19694866 | 334..38 | 1485 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:07:11 has no hits.
BO12532.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:38:29 Download gff for
BO12532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-PA | 1..321 | 17..335 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:15:15 Download gff for
BO12532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-PA | 1..321 | 17..335 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 01:52:08 Download gff for
BO12532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-RA | 102..430 | 7..341 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:08:09 Download gff for
BO12532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-RA | 102..430 | 7..341 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:08:09 Download gff for
BO12532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19694565..19694864 | 40..341 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 01:52:08 Download gff for
BO12532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19588598..19588897 | 40..341 | 99 | <- | Minus |
BO12532.complete Sequence
352 bp assembled on 2006-10-11
GenBank Submission: FJ632476
> BO12532.complete
GAAGTTATCAGTCGACATGGCTGGATTCCTGAAGACAAGAAAGCGCAGCC
GGGAGGATGAACTGGCCTGCGAGTCGCCCCTTTCGAAGCGCATCAACAAC
CTGAATCTGAACTACGAGGATGGGAACAGCAGCAGCAGCAGCAGCTGCAG
CATTCCGCCACTGTCGGGAGGAGGAGCGACTGGTGGATCCGGCGGGTCCG
ATGCAGCCGGAAACGGTGTGGCGGCCGGATACGAATACAACCCAGAACTG
GGAGCCGAACAAAACCCATTTTACTACGAGAAGAACAAGATGCTGTACGA
CCTGCATGTCGAGCGCATCAAGCGGAGCAGCCAGGCAAGCTTTCTAGACC
AT
BO12532.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:14:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14229-RB | 321 | CG14229-PB | 1..318 | 17..334 | 1590 | 100 | Plus |
| CG14229-RC | 321 | CG14229-PC | 1..318 | 17..334 | 1590 | 100 | Plus |
| CG14229-RA | 321 | CG14229-PA | 1..318 | 17..334 | 1590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:14:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14229-RB | 1018 | CG14229-RB | 108..425 | 17..334 | 1590 | 100 | Plus |
| CG14229-RC | 989 | CG14229-RC | 300..617 | 17..334 | 1590 | 100 | Plus |
| CG14229-RA | 797 | CG14229-RA | 108..425 | 17..334 | 1590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:14:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19694570..19694866 | 334..38 | 1485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:14:21 has no hits.
BO12532.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:38:37 Download gff for
BO12532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-RA | 1..321 | 17..335 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:00:41 Download gff for
BO12532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-RA | 85..413 | 7..341 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:43:25 Download gff for
BO12532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-RA | 108..425 | 17..336 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:38:38 Download gff for
BO12532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-RA | 85..413 | 7..341 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:48:30 Download gff for
BO12532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-RA | 108..425 | 17..336 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:48:30 Download gff for
BO12532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19694566..19694864 | 40..336 | 99 | <- | Minus |
| X | 19694929..19694951 | 17..39 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:43:25 Download gff for
BO12532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19588599..19588897 | 40..336 | 99 | <- | Minus |
| arm_X | 19588962..19588984 | 17..39 | 100 | | Minus |
BO12532.pep Sequence
Translation from 16 to 352
> BO12532.pep
MAGFLKTRKRSREDELACESPLSKRINNLNLNYEDGNSSSSSSCSIPPLS
GGGATGGSGGSDAAGNGVAAGYEYNPELGAEQNPFYYEKNKMLYDLHVER
IKRSSQASFLDH
BO12532.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:20:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14229-PB | 106 | CG14229-PB | 1..106 | 1..106 | 554 | 100 | Plus |
| CG14229-PC | 106 | CG14229-PC | 1..106 | 1..106 | 554 | 100 | Plus |
| CG14229-PA | 106 | CG14229-PA | 1..106 | 1..106 | 554 | 100 | Plus |
