Clone Sequence Records
BO12536.3prime Sequence
860 bp (832 high quality bases) assembled on 2006-05-08
> BO12536.3prime
ATGGTCTAGAAAGCTTGCGTAGGAGATGCCAGTGTGGTCGCGGATCCAGT
CCAGGTAGCTGGTGACGCGGGTGAAGCCATCGGGCAGGCCCGAGGTGCAG
CCGCTGGCGGCCACAAAGGAGGTGACACCGACCAGCTTGGAGCGGTCGTG
GAGGACCAGTGGGCCGCCAGAGTCGCCGGCGCAGGTGGACTTGCCGCCGG
GGGTGGAGGTGCAGATGACGTTGTCGGTGATCACATCGGTTCCATAGACG
CTGGAGCACTCGTCGCGGGTGATGATCTGGGAGTCCACGCAGTTCAGGTA
GTCGGAGACGCCACAGCTATCGCAAGGCCTGCCCCATCCGGAGGCTAGAG
CCCACCAGCCGGCAAAGCTGTCGTGGCGCTCGTTGCCATCGGGCAGCTCC
ACCTTGTTGATCAGGTGCCAGAAGTCCACGTGCGGGGTGTTGATCAGCGA
GATGTCGTTGTTCAGGTTGTTGGTGTTGTAGTCCGAGTGCTGGCGGAAGT
GGCCGCTGCCCACGGTGTGGGTGTACTGAGCCTGGAGGCGCCACAGAGCA
CCGTAGTAGATGGTGACGGAGTGAGCTCCGTGGGTGCAGTGGGCAGCCGT
GATCACCCAGGTGTGACCGATGATCGAGCCACCGCACCACCAGCCACCGC
TGTCGCTGCTGAAGCCCAGACCCACGATGTAGGGCACCTTGCCCTCGTAG
GCGGGATAGCCGTTGGTAATGCGACCCTCGATCGAGCCGGATCCGGATCC
CAGGACGGCGTCCTTTAGGGGCACCGGCTTCACCTTCTCAGGCTGGGCGG
CGGCGCAGGCAATGGCCACGGCCAGGACAGTTAGGAACAGCTTCATGTCG
ACTGATAACT
BO12536.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:46:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8869-PA | 831 | Jon25Bii-RA | 1..828 | 846..19 | 4140 | 100 | Minus |
| CG18030-PA | 804 | Jon99Fi-RA | 104..165 | 728..667 | 235 | 95.1 | Minus |
| CG31034-PA | 798 | Jon99Cii-RA | 98..159 | 728..667 | 235 | 95.1 | Minus |
| CG2229-PA | 804 | Jon99Fii-RA | 104..164 | 728..668 | 230 | 95 | Minus |
| CG2229-PA | 804 | Jon99Fii-RA | 360..438 | 469..391 | 220 | 91.1 | Minus |
| CG31362-PA | 798 | Jon99Ciii-RA | 98..159 | 728..667 | 210 | 93.5 | Minus |
| CG10475-PA | 789 | Jon65Ai-RA | 736..782 | 69..23 | 210 | 97.8 | Minus |
| CG18030-PA | 804 | Jon99Fi-RA | 391..438 | 438..391 | 190 | 95.8 | Minus |
| CG31034-PA | 798 | Jon99Cii-RA | 738..795 | 76..19 | 165 | 91.3 | Minus |
| CG31362-PA | 798 | Jon99Ciii-RA | 738..795 | 76..19 | 165 | 91.3 | Minus |
| CG8867-PA | 801 | Jon25Bi-RA | 115..171 | 714..658 | 160 | 91.2 | Minus |
| CG8867-PB | 801 | Jon25Bi-RB | 115..171 | 714..658 | 160 | 91.2 | Minus |
| CG2229-PA | 804 | Jon99Fii-RA | 186..224 | 643..605 | 145 | 94.8 | Minus |
| CG18030-PA | 804 | Jon99Fi-RA | 186..224 | 643..605 | 145 | 94.8 | Minus |
| CG31034-PA | 798 | Jon99Cii-RA | 180..218 | 643..605 | 145 | 94.8 | Minus |
| CG31362-PA | 798 | Jon99Ciii-RA | 180..218 | 643..605 | 145 | 94.8 | Minus |
| CG8867-PA | 801 | Jon25Bi-RA | 384..432 | 439..391 | 145 | 91.8 | Minus |
| CG8867-PB | 801 | Jon25Bi-RB | 384..432 | 439..391 | 145 | 91.8 | Minus |
| CG6298-PA | 1239 | Jon74E-RA | 1185..1218 | 76..43 | 145 | 97 | Minus |
| CG10475-PA | 789 | Jon65Ai-RA | 124..175 | 708..657 | 135 | 90.3 | Minus |
| CG8579-PA | 816 | Jon44E-RA | 775..806 | 57..26 | 135 | 96.8 | Minus |
| CG8579-PA | 816 | Jon44E-RA | 108..164 | 733..677 | 135 | 89.4 | Minus |
| CG7118-PA | 783 | Jon66Ci-RA | 364..405 | 432..391 | 135 | 92.8 | Minus |
| CG7170-PA | 789 | Jon66Cii-RA | 376..417 | 432..391 | 135 | 92.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:44:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jon25Bii-RB | 894 | CG8869-RB | 21..850 | 848..19 | 4150 | 100 | Minus |
| Jon25Bii-RA | 884 | CG8869-RA | 21..850 | 848..19 | 4150 | 100 | Minus |
| Jon99Cii-RA | 862 | CG31034-RA | 126..823 | 728..19 | 800 | 75.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 20:44:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4952287..4953116 | 19..848 | 4150 | 100 | Plus |
| 3R | 32079331 | 3R | 30489086..30489485 | 733..331 | 720 | 79.2 | Minus |
| 3R | 32079331 | 3R | 29924096..29924490 | 331..728 | 695 | 78.9 | Plus |
| 3R | 32079331 | 3R | 30487406..30487805 | 331..733 | 690 | 78.7 | Plus |
| 3R | 32079331 | 3R | 29922339..29922733 | 728..331 | 665 | 78.4 | Minus |
| 2R | 25286936 | 2R | 8691569..8692274 | 740..26 | 475 | 71.7 | Minus |
| 2L | 23513712 | 2L | 4954692..4955028 | 391..733 | 460 | 77 | Plus |
| 2L | 23513712 | 2L | 4954347..4954517 | 37..207 | 345 | 80.1 | Plus |
| 2L | 23513712 | 2L | 4949975..4950182 | 19..226 | 335 | 77.4 | Plus |
| 3R | 32079331 | 3R | 29925917..29926067 | 583..733 | 260 | 78.1 | Plus |
| 3R | 32079331 | 3R | 30487103..30487310 | 19..226 | 260 | 75 | Plus |
Blast to na_te.dros performed on 2015-02-02 20:44:09 has no hits.
BO12536.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:38:36 Download gff for
BO12536.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8869-PA | 1..831 | 15..846 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:15:25 Download gff for
BO12536.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8869-PA | 1..831 | 15..846 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 17:26:12 Download gff for
BO12536.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon25Bii-RA | 13..857 | 9..860 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:17:56 Download gff for
BO12536.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon25Bii-RA | 13..857 | 9..860 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:17:56 Download gff for
BO12536.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4952280..4953124 | 9..860 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 17:26:12 Download gff for
BO12536.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4952280..4953124 | 9..860 | 98 | | Plus |
BO12536.5prime Sequence
843 bp (842 high quality bases) assembled on 2006-05-08
> BO12536.5prime
GAAGTTATCAGTCGACATGAAGCTGTTCCTAACTGTCCTGGCCGTGGCCA
TTGCCTGCGCCGCCGCCCAGCCTGAGAAGGTGAAGCCGGTGCCCCTAAAG
GACGCCGTCCTGGGATCCGGATCCGGCTCGATCGAGGGTCGCATTACCAA
CGGCTATCCCGCCTACGAGGGCAAGGTGCCCTACATCGTGGGTCTGGGCT
TCAGCAGCGACAGCGGTGGCTGGTGGTGCGGTGGCTCGATCATCGGTCAC
ACCTGGGTGATCACGGCTGCCCACTGCACCCACGGAGCTCACTCCGTCAC
CATCTACTACGGTGCTCTGTGGCGCCTCCAGGCTCAGTACACCCACACCG
TGGGCAGCGGCCACTTCCGCCAGCACTCGGACTACAACACCAACAACCTG
AACAACGACATCTCGCTGATCAACACCCCGCACGTGGACTTCTGGCACCT
GATCAACAAGGTGGAGCTGCCCGATGGCAACGAGCGCCACGACAGCTTTG
CCGGCTGGTGGGCTCTAGCCTCCGGATGGGGCAGGCCTTGCGATAGCTGT
GGCGTCTCCGACTACCTGAACTGCGTGGACTCCCAGATCATCACCCGCGA
CGAGTGCTCCAGCGTCTATGGAACCGATGTGATCACCGACAACGTCATCT
GCACCTCCACCCCCGGCGGCAAGTCCACCTGCGCCGGCGACTCTGGCGGC
CCACTGGTCCTCCACGACCGCTCCAAGCTGGTCGGTGTCACCTCCTTTGT
GGCCGCCAGCGGCTGCACCTCGGGCCTGCCCGATGGCTTCACCCGCGTCA
CCAGCTACCTGGACTGGATCCGCGACCACACTGGCATCTCCTA
BO12536.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:46:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8869-PA | 831 | Jon25Bii-RA | 1..827 | 17..843 | 4135 | 100 | Plus |
| CG18030-PA | 804 | Jon99Fi-RA | 104..165 | 135..196 | 235 | 95.1 | Plus |
| CG31034-PA | 798 | Jon99Cii-RA | 98..159 | 135..196 | 235 | 95.1 | Plus |
| CG2229-PA | 804 | Jon99Fii-RA | 104..164 | 135..195 | 230 | 95 | Plus |
| CG2229-PA | 804 | Jon99Fii-RA | 360..438 | 394..472 | 220 | 91.1 | Plus |
| CG31362-PA | 798 | Jon99Ciii-RA | 98..159 | 135..196 | 210 | 93.5 | Plus |
| CG10475-PA | 789 | Jon65Ai-RA | 736..782 | 794..840 | 210 | 97.8 | Plus |
| CG18030-PA | 804 | Jon99Fi-RA | 391..438 | 425..472 | 190 | 95.8 | Plus |
| CG31034-PA | 798 | Jon99Cii-RA | 738..794 | 787..843 | 160 | 91.2 | Plus |
| CG31362-PA | 798 | Jon99Ciii-RA | 738..794 | 787..843 | 160 | 91.2 | Plus |
| CG8867-PA | 801 | Jon25Bi-RA | 115..171 | 149..205 | 160 | 91.2 | Plus |
| CG8867-PB | 801 | Jon25Bi-RB | 115..171 | 149..205 | 160 | 91.2 | Plus |
| CG2229-PA | 804 | Jon99Fii-RA | 186..224 | 220..258 | 145 | 94.8 | Plus |
| CG18030-PA | 804 | Jon99Fi-RA | 186..224 | 220..258 | 145 | 94.8 | Plus |
| CG31034-PA | 798 | Jon99Cii-RA | 180..218 | 220..258 | 145 | 94.8 | Plus |
| CG31362-PA | 798 | Jon99Ciii-RA | 180..218 | 220..258 | 145 | 94.8 | Plus |
| CG8867-PA | 801 | Jon25Bi-RA | 384..432 | 424..472 | 145 | 91.8 | Plus |
| CG8867-PB | 801 | Jon25Bi-RB | 384..432 | 424..472 | 145 | 91.8 | Plus |
| CG6298-PA | 1239 | Jon74E-RA | 1185..1218 | 787..820 | 145 | 97 | Plus |
| CG10475-PA | 789 | Jon65Ai-RA | 124..175 | 155..206 | 135 | 90.3 | Plus |
| CG8579-PA | 816 | Jon44E-RA | 775..806 | 806..837 | 135 | 96.8 | Plus |
| CG8579-PA | 816 | Jon44E-RA | 108..164 | 130..186 | 135 | 89.4 | Plus |
| CG7118-PA | 783 | Jon66Ci-RA | 364..405 | 431..472 | 135 | 92.8 | Plus |
| CG7170-PA | 789 | Jon66Cii-RA | 376..417 | 431..472 | 135 | 92.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 10:43:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jon25Bii-RB | 894 | CG8869-RB | 21..849 | 15..843 | 4145 | 100 | Plus |
| Jon25Bii-RA | 884 | CG8869-RA | 21..849 | 15..843 | 4145 | 100 | Plus |
| Jon99Cii-RA | 862 | CG31034-RA | 126..822 | 135..843 | 795 | 75.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 10:43:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4952288..4953116 | 843..15 | 4145 | 100 | Minus |
| 3R | 32079331 | 3R | 30489086..30489485 | 130..532 | 720 | 79.2 | Plus |
| 3R | 32079331 | 3R | 29924096..29924490 | 532..135 | 695 | 78.9 | Minus |
| 3R | 32079331 | 3R | 30487406..30487805 | 532..130 | 690 | 78.7 | Minus |
| 3R | 32079331 | 3R | 29922339..29922733 | 135..532 | 665 | 78.4 | Plus |
| 2R | 25286936 | 2R | 8691569..8692274 | 123..837 | 475 | 71.7 | Plus |
| 2L | 23513712 | 2L | 4954692..4955028 | 472..130 | 460 | 77 | Minus |
| 2L | 23513712 | 2L | 4954347..4954517 | 826..656 | 345 | 80.1 | Minus |
| 2L | 23513712 | 2L | 4949979..4950182 | 840..637 | 330 | 77.5 | Minus |
| 3R | 32079331 | 3R | 29925917..29926067 | 280..130 | 260 | 78.1 | Minus |
| 3R | 32079331 | 3R | 30487107..30487310 | 840..637 | 255 | 75 | Minus |
Blast to na_te.dros performed on 2015-02-02 10:43:24 has no hits.
BO12536.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:38:37 Download gff for
BO12536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8869-PA | 1..826 | 17..842 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:15:27 Download gff for
BO12536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8869-PA | 1..826 | 17..842 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:57:24 Download gff for
BO12536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon25Bii-RA | 12..848 | 2..842 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:25:15 Download gff for
BO12536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon25Bii-RA | 12..848 | 2..842 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:25:15 Download gff for
BO12536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4952289..4953125 | 2..842 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:57:24 Download gff for
BO12536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4952289..4953125 | 2..842 | 99 | | Minus |
BO12536.complete Sequence
862 bp assembled on 2006-10-11
GenBank Submission: FJ632478
> BO12536.complete
GAAGTTATCAGTCGACATGAAGCTGTTCCTAACTGTCCTGGCCGTGGCCA
TTGCCTGCGCCGCCGCCCAGCCTGAGAAGGTGAAGCCGGTGCCCCTAAAG
GACGCCGTCCTGGGATCCGGATCCGGCTCGATCGAGGGTCGCATTACCAA
CGGCTATCCCGCCTACGAGGGCAAGGTGCCCTACATCGTGGGTCTGGGCT
TCAGCAGCGACAGCGGTGGCTGGTGGTGCGGTGGCTCGATCATCGGTCAC
ACCTGGGTGATCACGGCTGCCCACTGCACCCACGGAGCTCACTCCGTCAC
CATCTACTACGGTGCTCTGTGGCGCCTCCAGGCTCAGTACACCCACACCG
TGGGCAGCGGCCACTTCCGCCAGCACTCGGACTACAACACCAACAACCTG
AACAACGACATCTCGCTGATCAACACCCCGCACGTGGACTTCTGGCACCT
GATCAACAAGGTGGAGCTGCCCGATGGCAACGAGCGCCACGACAGCTTTG
CCGGCTGGTGGGCTCTAGCCTCCGGATGGGGCAGGCCTTGCGATAGCTGT
GGCGTCTCCGACTACCTGAACTGCGTGGACTCCCAGATCATCACCCGCGA
CGAGTGCTCCAGCGTCTATGGAACCGATGTGATCACCGACAACGTCATCT
GCACCTCCACCCCCGGCGGCAAGTCCACCTGCGCCGGCGACTCTGGCGGC
CCACTGGTCCTCCACGACCGCTCCAAGCTGGTCGGTGTCACCTCCTTTGT
GGCCGCCAGCGGCTGCACCTCGGGCCTGCCCGATGGCTTCACCCGCGTCA
CCAGCTACCTGGACTGGATCCGCGACCACACTGGCATCTCCTACGCAAGC
TTTCTAGACCAT
BO12536.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:02:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jon25Bii-RB | 831 | CG8869-PB | 1..828 | 17..844 | 4140 | 100 | Plus |
| Jon25Bii-RA | 831 | CG8869-PA | 1..828 | 17..844 | 4140 | 100 | Plus |
| Jon99Fi-RA | 804 | CG18030-PA | 99..498 | 130..532 | 720 | 79.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:02:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jon25Bii-RB | 894 | CG8869-RB | 21..850 | 15..844 | 4150 | 100 | Plus |
| Jon25Bii-RA | 884 | CG8869-RA | 21..850 | 15..844 | 4150 | 100 | Plus |
| Jon99Fi-RA | 933 | CG18030-RA | 124..523 | 130..532 | 720 | 79.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 17:02:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4952287..4953116 | 844..15 | 4150 | 100 | Minus |
| 3R | 32079331 | 3R | 30489086..30489485 | 130..532 | 720 | 79.2 | Plus |
| 3R | 32079331 | 3R | 29924096..29924490 | 532..135 | 695 | 78.9 | Minus |
| 3R | 32079331 | 3R | 30487406..30487805 | 532..130 | 690 | 78.7 | Minus |
| 3R | 32079331 | 3R | 29922339..29922733 | 135..532 | 665 | 78.4 | Plus |
| 2R | 25286936 | 2R | 8691569..8692274 | 123..837 | 475 | 71.7 | Plus |
| 2L | 23513712 | 2L | 4954692..4955028 | 472..130 | 460 | 77 | Minus |
| 3L | 28110227 | 3L | 6054102..6054321 | 346..127 | 350 | 77.3 | Minus |
| 2L | 23513712 | 2L | 4954347..4954517 | 826..656 | 345 | 80.1 | Minus |
| 2L | 23513712 | 2L | 4949975..4950182 | 844..637 | 335 | 77.4 | Minus |
| 3R | 32079331 | 3R | 29925917..29926067 | 280..130 | 260 | 78.1 | Minus |
| 3R | 32079331 | 3R | 30487103..30487310 | 844..637 | 260 | 75 | Minus |
| 3L | 28110227 | 3L | 8392871..8393046 | 837..662 | 250 | 76.1 | Minus |
| 3L | 28110227 | 3L | 8393335..8393537 | 346..135 | 245 | 75.5 | Minus |
| 3L | 28110227 | 3L | 6052739..6052924 | 395..580 | 240 | 75.3 | Plus |
| 3L | 28110227 | 3L | 6050882..6051030 | 131..279 | 235 | 77.2 | Plus |
| 3L | 28110227 | 3L | 6052458..6052664 | 143..346 | 235 | 75.4 | Plus |
| 3L | 28110227 | 3L | 6053893..6054062 | 576..407 | 235 | 75.9 | Minus |
| 3L | 28110227 | 3L | 8391653..8391732 | 130..209 | 235 | 86.2 | Plus |
| 3L | 28110227 | 3L | 6053635..6053681 | 840..794 | 220 | 97.9 | Minus |
| 3L | 28110227 | 3L | 9641763..9641823 | 784..844 | 185 | 86.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 17:02:22 has no hits.
BO12536.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:38:41 Download gff for
BO12536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon25Bii-RA | 1..831 | 17..848 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:00:44 Download gff for
BO12536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon25Bii-RA | 10..855 | 2..854 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:28 Download gff for
BO12536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon25Bii-RA | 23..850 | 17..846 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:38:41 Download gff for
BO12536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon25Bii-RA | 10..855 | 2..854 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:33:00 Download gff for
BO12536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon25Bii-RA | 23..850 | 17..846 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:33:00 Download gff for
BO12536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4952285..4953114 | 17..846 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:28 Download gff for
BO12536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4952285..4953114 | 17..846 | 99 | | Minus |
BO12536.pep Sequence
Translation from 16 to 862
> BO12536.pep
MKLFLTVLAVAIACAAAQPEKVKPVPLKDAVLGSGSGSIEGRITNGYPAY
EGKVPYIVGLGFSSDSGGWWCGGSIIGHTWVITAAHCTHGAHSVTIYYGA
LWRLQAQYTHTVGSGHFRQHSDYNTNNLNNDISLINTPHVDFWHLINKVE
LPDGNERHDSFAGWWALASGWGRPCDSCGVSDYLNCVDSQIITRDECSSV
YGTDVITDNVICTSTPGGKSTCAGDSGGPLVLHDRSKLVGVTSFVAASGC
TSGLPDGFTRVTSYLDWIRDHTGISYASFLDH
BO12536.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:20:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jon25Bii-PB | 276 | CG8869-PB | 1..276 | 1..276 | 1519 | 100 | Plus |
| Jon25Bii-PA | 276 | CG8869-PA | 1..276 | 1..276 | 1519 | 100 | Plus |
| Jon44E-PB | 271 | CG8579-PB | 1..271 | 1..276 | 916 | 60.6 | Plus |
| Jon44E-PA | 271 | CG8579-PA | 1..271 | 1..276 | 916 | 60.6 | Plus |
| Jon99Fii-PA | 267 | CG2229-PA | 1..267 | 1..276 | 905 | 62.4 | Plus |
