Clone BO12567 Report

Search the DGRC for BO12567

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:125
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG14153-RA
Protein status:BO12567.pep: validated full length
Sequenced Size:745

Clone Sequence Records

BO12567.3prime Sequence

743 bp (742 high quality bases) assembled on 2006-05-08

> BO12567.3prime
ATGGTCTAGAAAGCTTGCCTTTTCAACAAAATCCTCGTTGGTGTTGTAAA
CTGGCTGCAGGCGTCTTGGATATTTACGCAAATATTCGGCAAAATGTTGG
GCATATTTGGCCTGGTAATCACGACGCCTCCAGGGCTGAGCGGGTTCATA
GAAATTCTCCTTATTATTGTACGTATTTAGATAGTTATTTGTGGCCAATG
AGCGACTGCCGCCAATTTGGACCACTTGCTCCTCATCGCGACCCGAATCG
CTGGTCTCCAATTCCGGATTCCTTTGTGGATATGGCTGAAGTTGAGGTGG
AATTTGAGATTGAGGATAGCGCAGAGGTGTTGATGGCGTAGTCTCCTGTT
GTTGATAGTAAAAGTAGCCGGGCACATTGTTATAGTTGTGATTGGGAGCA
TGTGTTGGGTCTTCCCTTCTCCAATTTGGATATGCTTGTCTATACGCAGG
TTCCGCAACATAATAACCATTACTTTTTGGATACTGCTGCTGTTCCTGGG
CACTGTACTGATTATCATTCACTATGATAGGCGGACCCGACCATATCGAT
TGTACATCTGGATTGGCATAGTTGGATTGAGCGTAGTTGGATGTGGTAAT
TGCATAAGCACTGCCATAAGGTGATGCATACTGAGCTCTCCCACAAACTG
CATCGATCATCAGGGGCATAAGTGCACATAGCCAGCTCGACGAGCTGCTC
TTCACGATCCGTCCTGTTTGCGGCTTCATGTCGACTGATAACT

BO12567.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:46:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14153-PA 714 CG14153-RA 1..711 729..19 3555 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:40:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG14153-RA 1022 CG14153-RA 7..726 737..19 3560 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:40:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10643656..10644319 682..19 3320 100 Minus
3L 28110227 3L 10643543..10643590 729..682 240 100 Minus
Blast to na_te.dros performed on 2015-02-10 18:40:58 has no hits.

BO12567.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:39:28 Download gff for BO12567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14153-PA 1..714 18..729 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:16:34 Download gff for BO12567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14153-PA 1..714 18..729 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 15:02:33 Download gff for BO12567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14153-RA 1..726 19..741 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:00:18 Download gff for BO12567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14153-RA 1..726 19..741 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:00:18 Download gff for BO12567.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 10643534..10643590 682..737 96 -> Minus
3L 10643657..10644319 19..681 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 15:02:33 Download gff for BO12567.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10636634..10636690 682..737 96 -> Minus
arm_3L 10636757..10637419 19..681 100   Minus

BO12567.5prime Sequence

743 bp (742 high quality bases) assembled on 2006-05-08

> BO12567.5prime
GAAGTTATCAGTCGACATGAAGCCGCAAACAGGACGGATCGTGAAGAGCA
GCTCGTCGAGCTGGCTATGTGCACTTATGCCCCTGATGATCGATGCAGTT
TGTGGGAGAGCTCAGTATGCATCACCTTATGGCAGTGCTTATGCAATTAC
CACATCCAACTACGCTCAATCCAACTATGCCAATCCAGATGTACAATCGA
TATGGTCGGGTCCGCCTATCATAGTGAATGATAATCAGTACAGTGCCCAG
GAACAGCAGCAGTATCCAAAAAGTAATGGTTATTATGTTGCGGAACCTGC
GTATAGACAAGCATATCCAAATTGGAGAAGGGAAGACCCAACACATGCTC
CCAATCACAACTATAACAATGTGCCCGGCTACTTTTACTATCAACAACAG
GAGACTACGCCATCAACACCTCTGCGCTATCCTCAATCTCAAATTCCACC
TCAACTTCAGCCATATCCACAAAGGAATCCGGAATTGGAGACCAGCGATT
CGGGTCGCGATGAGGAGCAAGTGGTCCAAATTGGCGGCAGTCGCTCATTG
GCCACAAATAACTATCTAAATACGTACAATAATAAGGAGAATTTCTATGA
ACCCGCTCAGCCCTGGAGGCGTCGTGATTACCAGGCCAAATATGCCCAAC
ATTTTGCCGAATATTTGCGTAAATATCCAAGACGCCTGCAGCCAGTTTAC
AACACCAACGAGGATTTTGTTGAAAAGGCAAGCTTTCTAGACC

BO12567.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:46:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14153-PA 714 CG14153-RA 1..711 17..727 3555 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:28:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG14153-RA 1022 CG14153-RA 7..726 9..727 3560 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:28:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10643656..10644319 64..727 3320 100 Plus
3L 28110227 3L 10643543..10643590 17..64 240 100 Plus
Blast to na_te.dros performed on 2015-02-11 10:28:09 has no hits.

BO12567.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:39:29 Download gff for BO12567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14153-PA 1..714 17..728 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:16:35 Download gff for BO12567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14153-PA 1..714 17..728 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:22:15 Download gff for BO12567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14153-RA 1..726 5..727 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:25:46 Download gff for BO12567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14153-RA 1..726 5..727 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:25:46 Download gff for BO12567.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 10643534..10643590 9..64 96 -> Plus
3L 10643657..10644319 65..727 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:22:15 Download gff for BO12567.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10636634..10636690 9..64 96 -> Plus
arm_3L 10636757..10637419 65..727 100   Plus

BO12567.complete Sequence

745 bp assembled on 2006-10-11

GenBank Submission: FJ632491

> BO12567.complete
GAAGTTATCAGTCGACATGAAGCCGCAAACAGGACGGATCGTGAAGAGCA
GCTCGTCGAGCTGGCTATGTGCACTTATGCCCCTGATGATCGATGCAGTT
TGTGGGAGAGCTCAGTATGCATCACCTTATGGCAGTGCTTATGCAATTAC
CACATCCAACTACGCTCAATCCAACTATGCCAATCCAGATGTACAATCGA
TATGGTCGGGTCCGCCTATCATAGTGAATGATAATCAGTACAGTGCCCAG
GAACAGCAGCAGTATCCAAAAAGTAATGGTTATTATGTTGCGGAACCTGC
GTATAGACAAGCATATCCAAATTGGAGAAGGGAAGACCCAACACATGCTC
CCAATCACAACTATAACAATGTGCCCGGCTACTTTTACTATCAACAACAG
GAGACTACGCCATCAACACCTCTGCGCTATCCTCAATCTCAAATTCCACC
TCAACTTCAGCCATATCCACAAAGGAATCCGGAATTGGAGACCAGCGATT
CGGGTCGCGATGAGGAGCAAGTGGTCCAAATTGGCGGCAGTCGCTCATTG
GCCACAAATAACTATCTAAATACGTACAATAATAAGGAGAATTTCTATGA
ACCCGCTCAGCCCTGGAGGCGTCGTGATTACCAGGCCAAATATGCCCAAC
ATTTTGCCGAATATTTGCGTAAATATCCAAGACGCCTGCAGCCAGTTTAC
AACACCAACGAGGATTTTGTTGAAAAGGCAAGCTTTCTAGACCAT

BO12567.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:44:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG14153-RA 714 CG14153-PA 1..711 17..727 3555 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG14153-RA 1022 CG14153-RA 16..726 17..727 3555 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:43:58
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10643656..10644319 64..727 3320 100 Plus
3L 28110227 3L 10643543..10643590 17..64 240 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:43:59 has no hits.

BO12567.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:38:35 Download gff for BO12567.complete
Subject Subject Range Query Range Percent Splice Strand
CG14153-RA 1..714 17..728 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:00:37 Download gff for BO12567.complete
Subject Subject Range Query Range Percent Splice Strand
CG14153-RA 2..721 9..727 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:08:21 Download gff for BO12567.complete
Subject Subject Range Query Range Percent Splice Strand
CG14153-RA 16..726 17..729 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:38:36 Download gff for BO12567.complete
Subject Subject Range Query Range Percent Splice Strand
CG14153-RA 2..721 9..727 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:08 Download gff for BO12567.complete
Subject Subject Range Query Range Percent Splice Strand
CG14153-RA 16..726 17..729 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:26:08 Download gff for BO12567.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10643543..10643590 17..64 100 -> Plus
3L 10643657..10644319 65..729 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:08:21 Download gff for BO12567.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10636643..10636690 17..64 100 -> Plus
arm_3L 10636757..10637419 65..729 99   Plus

BO12567.pep Sequence

Translation from 16 to 745

> BO12567.pep
MKPQTGRIVKSSSSSWLCALMPLMIDAVCGRAQYASPYGSAYAITTSNYA
QSNYANPDVQSIWSGPPIIVNDNQYSAQEQQQYPKSNGYYVAEPAYRQAY
PNWRREDPTHAPNHNYNNVPGYFYYQQQETTPSTPLRYPQSQIPPQLQPY
PQRNPELETSDSGRDEEQVVQIGGSRSLATNNYLNTYNNKENFYEPAQPW
RRRDYQAKYAQHFAEYLRKYPRRLQPVYNTNEDFVEKASFLDH

BO12567.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:20:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG14153-PA 237 CG14153-PA 1..237 1..237 1300 100 Plus