Clone BO12651 Report

Search the DGRC for BO12651

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:126
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG7638-RA
Protein status:BO12651.pep:
Sequenced Size:1522

Clone Sequence Records

BO12651.3prime Sequence

817 bp (742 high quality bases) assembled on 2006-05-08

> BO12651.3prime
ATGGTCTAGAAAGCTTGCGGTCTTGTTGAAATATGATTGGTAGACAATGC
CCAGCGATGAAGTGGCGAATAGGGTGAAGTAGCTCCACCAGGTGGCAAAG
CCCAGGAAACCCTTGTACACCTCCGTGGAGAAAACGTTTTTCAGGCTGCT
AAACGAAGCCTGCAGCGATTGCGCCGACTCAATAATATTAAAGTCACCAT
CTCCTTGGGAAACGGCAACACCAGCTCCTTCCGTTTCGCTAGCCGCACAC
TCGTGCTGCAGGACAACGCTCTCGCGGAAAATACCCGACCAGCTAAAGCC
GCCCAGACTTTTGTACATAAGTGTGAGATAAAGGCATAGGATCAGTGGGG
CAGCAAATTGCAGCGTCACAACACATAGATAGTAGAAAATAGACGAGATC
TTCTGCTTGAACTCTACGTTGGTGATCCGACCGGCCTCCTTGCGCAGATC
CATGATCTTGTCGTGGGCCAGATTCAGGTACGATTGCAGATATATGGGCA
TCAAGGCGAAACGAACCACCACCACAAAGATCACTAGCAGCAGGCGAAGT
GTCTCAAAAACGTGTGGCTTCAGTAGTGGCTGTTGCATTCCTTGGAAGAC
GCGCACCGTCAGGTAATCGCGGCTAATGGGCCGAATCCACAGGATGACCA
GAATAAAGGGCAGCACAAAGCTGAGATTCAGGAGCACTTGCAGCAACCGG
TTGCCGCGACAGTACTTCAACGAATCCCAGTGCATCTTGGCCATCCGCAA
GCCGGGGGAAGGTGAACAATGAGCCGAGCAGGCCGCAACCCATGGCCAAA
AAGAACTTGACCACGAT

BO12651.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:48:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG7638-PA 1491 CG7638-RA 750..1488 757..19 3695 100 Minus
CG7638-PA 1491 CG7638-RA 691..753 817..755 315 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:13:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG7638-RA 1891 CG7638-RA 838..1635 817..19 3970 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:13:02
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11111423..11111690 401..134 1340 100 Minus
3L 28110227 3L 11110878..11111119 817..575 1165 99.6 Minus
3L 28110227 3L 11111188..11111362 574..400 875 100 Minus
3L 28110227 3L 11111745..11111861 135..19 585 100 Minus
Blast to na_te.dros performed on 2015-02-10 18:13:06 has no hits.

BO12651.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:41:53 Download gff for BO12651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7638-PA 691..1491 18..817 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:19:49 Download gff for BO12651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7638-PA 691..1491 18..817 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:24:51 Download gff for BO12651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7638-RA 838..1641 11..817 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:21:39 Download gff for BO12651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7638-RA 838..1641 11..817 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:21:39 Download gff for BO12651.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 11110878..11111119 575..817 99 -> Minus
3L 11111188..11111362 400..574 100 -> Minus
3L 11111425..11111688 136..399 100 -> Minus
3L 11111745..11111867 11..135 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:24:51 Download gff for BO12651.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11103978..11104219 575..817 99 -> Minus
arm_3L 11104288..11104462 400..574 100 -> Minus
arm_3L 11104525..11104788 136..399 100 -> Minus
arm_3L 11104845..11104967 11..135 96   Minus

BO12651.5prime Sequence

878 bp (774 high quality bases) assembled on 2006-05-08

> BO12651.5prime
GAAGTTATCAGTCGACATGGCTGTGCTGGGCGCCCAATTGGTCATCACCT
TGGTGATGGTCAGCGTTATCCAGAAGTTGAGTCCACACTACTCCTTCGCC
AAGTGGATTCTGTGCCGCACCGGACTCTATCGATACCTGCATCCCACGGA
CGATGAGCTGCGGTCCCGCGGCGGTGTGCCCAAGGAGAAGCCACCAAAAG
GTGGTCGAAATAAGCAGGCAAATGGTTCAGGAGGAGCGGCGGGTGCACAA
TTCCACATACCGCGCAGCATTGAGGTGGAGCTGTTGACGTCACCGGTGTT
GGAACGGGATGTTGTCCACCTGCGCTACTTCACCGAATATCAATGGCTGC
TGGACTTCAGTGTCTACACGGGGATCGTCTACGTGGTCTCCGAGCTGTTC
CACTTCTACTACCCGCTGCGCCACGAGGTCAACTTGAGCATGGTGTGGTG
CCTGCTGGTCATCTTCTTTGCCCTGAAGCTGCTGTCCTCGCTTACGGTGC
TCTACTTCCAGAGCGAGGAGTCCATCGGCGAGAGGTCGATGGTGATTGTT
GCCTGTTTGGTTTACCTGCTGGTGGCCATGGTCGTGCTGATCGTTGACGA
GCGCATTCTGGAGACGGGACTGGAGGATGCCTATGCGAGCTTTAATGCCA
GCGCTTCCAAGTTCCTCACCGAGCAGGGCCTGCCATCATCTGGTCCCGCC
TCCAAGATCGTGGTCAAGTTCTTTTTGGCCATGGGTTGCGGCCTGCTCGG
CTCATTGTTCACCTTCCCCGGCTTGCGGATGGCCAAGATGCACTGGGATT
CGTTGAAGTACTGTCGCGGCAACCGGGTGCTGCAAGTGCTCCTGAATCTC
AGCTTTGTGCTGCCCTTTATCTGGTCAT

BO12651.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:48:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG7638-PA 1491 CG7638-RA 1..854 17..870 4245 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 09:10:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG7638-RA 1891 CG7638-RA 148..1010 17..878 4275 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 09:10:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11110029..11110404 19..394 1880 100 Plus
3L 28110227 3L 11110503..11110800 393..690 1490 100 Plus
3L 28110227 3L 11110862..11111041 691..870 885 99.4 Plus
Blast to na_te.dros performed on 2015-02-09 09:10:10 has no hits.

BO12651.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:41:54 Download gff for BO12651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7638-PA 1..863 17..878 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:19:50 Download gff for BO12651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7638-PA 1..863 17..878 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 18:16:33 Download gff for BO12651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7638-RA 144..1010 10..878 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:46:58 Download gff for BO12651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7638-RA 144..1010 10..878 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:46:58 Download gff for BO12651.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 11110022..11110404 9..394 98 -> Plus
3L 11110505..11110800 395..690 100 -> Plus
3L 11110862..11111050 691..878 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 18:16:33 Download gff for BO12651.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11103122..11103504 9..394 98 -> Plus
arm_3L 11103605..11103900 395..690 100 -> Plus
arm_3L 11103962..11104150 691..878 98   Plus

BO12651.complete Sequence

1522 bp assembled on 2008-01-17

GenBank Submission: FJ632514

> BO12651.complete
GAAGTTATCAGTCGACATGGCTGTGCTGGGCGCCCAATTGGTCATCACCT
TGGTGATGGTCAGCGTTATCCAGAAGTTGAGTCCACACTACTCCTTCGCC
AAGTGGATTCTGTGCCGCACCGGACTCTATCGATACCTGCATCCCACGGA
CGATGAGCTGCGGTCCCGCGGCGGTGTGCCCAAGGAGAAGCCACCAAAAG
GTGGTCGAAATAAGCAGGCAAATGGTTCAGGAGGAGCGGCGGGTGCACAA
TTCCACATACCGCGCAGCATTGAGGTGGAGCTGTTGACGTCACCGGTGTT
GGAACGGGATGTTGTCCACCTGCGCTACTTCACCGAATATCAATGGCTGC
TGGACTTCAGTGTCTACACGGGGATCGTCTACGTGGTCTCCGAGCTGTTC
CACTTCTACTACCCGCTGCGCCACGAGGTCAACTTGAGCATGGTGTGGTG
CCTGCTGGTCATCTTCTTTGCCCTGAAGCTGCTGTCCTCGCTTACGGTGC
TCTACTTCCAGAGCGAGGAGTCCATCGGCGAGAGGTCGATGGTGATTGTT
GCCTGTTTGGTTTACCTGCTGGTGGCCATGGTCGTGCTGATCGTTGACGA
GCGCATTCTGGAGACGGGACTGGAGGATGCCTATGCGAGCTTTAATGCCA
GCGCTTCCAAGTTCCTCACCGAGCAGGGCCTGCCATCATCTGGTCCCGCC
TCCAAGATCGTGGTCAAGTTCTTTTTGGCCATGGGTTGCGGCCTGCTCGG
CTCATTGTTCACCTTCCCCGGCTTGCGGATGGCCAAGATGCACTGGGATT
CGTTGAAGTACTGTCGCGGCAACCGGTTGCTGCAAGTGCTCCTGAATCTC
AGCTTTGTGCTGCCCTTTATTCTGGTCATCCTGTGGATTCGGCCCATTAG
CCGCGATTACCTGACGGTGCGCGTCTTCCAAGGAATGCAACAGCCACTAC
TGAAGCCACACGTTTTTGAGACACTTCGCCTGCTGCTAGTGATCTTTGTG
GTGGTGGTTCGTTTCGCCTTGATGCCCATATATCTGCAATCGTACCTGAA
TCTGGCCCACGACAAGATCATGGATCTGCGCAAGGAGGCCGGTCGGATCA
CCAACGTAGAGTTCAAGCAGAAGATCTCGTCTATTTTCTACTATCTATGT
GTTGTGACGCTGCAATTTGCTGCCCCACTGATCCTATGCCTTTATCTCAC
ACTTATGTACAAAAGTCTGGGCGGCTTTAGCTGGTCGGGTATTTTCCGCG
AGAGCGTTGTCCTGCAGCACGAGTGTGCGGCTAGCGAAACGGAAGGAGCT
GGTGTTGCCGTTTCCCAAGGAGATGGTGACTTTAATATTATTGAGTCGGC
GCAATCGCTGCAGGCTTCGTTTAGCAGCCTGAAAAACGTTTTCTCCACGG
AGGTGTACAAGGGTTTCCTGGGCTTTGCCACCTGGTGGAGCTACTTCACC
CTATTCGCCACTTCATCGCTGGGCATTGTCTACCAATCATATTTCAACAA
GACCGCAAGCTTTCTAGACCAT

BO12651.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:34:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG7638-RA 1491 CG7638-PA 1..1488 17..1504 7440 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:34:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG7638-RA 1891 CG7638-RA 148..1635 17..1504 7440 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:34:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11110029..11110404 19..394 1880 100 Plus
3L 28110227 3L 11110503..11110800 393..690 1490 100 Plus
3L 28110227 3L 11111423..11111690 1122..1389 1340 100 Plus
3L 28110227 3L 11110862..11111119 691..948 1290 100 Plus
3L 28110227 3L 11111188..11111362 949..1123 875 100 Plus
3L 28110227 3L 11111745..11111861 1388..1504 585 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:34:55 has no hits.

BO12651.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:00:44 Download gff for BO12651.complete
Subject Subject Range Query Range Percent Splice Strand
CG7638-RA 1..1491 17..1505 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:35:19 Download gff for BO12651.complete
Subject Subject Range Query Range Percent Splice Strand
CG7638-RA 176..1663 17..1506 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:59 Download gff for BO12651.complete
Subject Subject Range Query Range Percent Splice Strand
CG7638-RA 148..1635 17..1506 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:00:44 Download gff for BO12651.complete
Subject Subject Range Query Range Percent Splice Strand
CG7638-RA 142..1639 10..1512 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:14:40 Download gff for BO12651.complete
Subject Subject Range Query Range Percent Splice Strand
CG7638-RA 148..1635 17..1506 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:14:40 Download gff for BO12651.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11110028..11110404 17..394 99 -> Plus
3L 11110505..11110800 395..690 100 -> Plus
3L 11110862..11111119 691..948 100 -> Plus
3L 11111188..11111362 949..1123 100 -> Plus
3L 11111425..11111688 1124..1387 100 -> Plus
3L 11111745..11111861 1388..1506 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:46:59 Download gff for BO12651.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11103128..11103504 17..394 99 -> Plus
arm_3L 11103605..11103900 395..690 100 -> Plus
arm_3L 11103962..11104219 691..948 100 -> Plus
arm_3L 11104288..11104462 949..1123 100 -> Plus
arm_3L 11104525..11104788 1124..1387 100 -> Plus
arm_3L 11104845..11104961 1388..1506 98   Plus

BO12651.pep Sequence

Translation from 16 to 1522

> BO12651.pep
MAVLGAQLVITLVMVSVIQKLSPHYSFAKWILCRTGLYRYLHPTDDELRS
RGGVPKEKPPKGGRNKQANGSGGAAGAQFHIPRSIEVELLTSPVLERDVV
HLRYFTEYQWLLDFSVYTGIVYVVSELFHFYYPLRHEVNLSMVWCLLVIF
FALKLLSSLTVLYFQSEESIGERSMVIVACLVYLLVAMVVLIVDERILET
GLEDAYASFNASASKFLTEQGLPSSGPASKIVVKFFLAMGCGLLGSLFTF
PGLRMAKMHWDSLKYCRGNRLLQVLLNLSFVLPFILVILWIRPISRDYLT
VRVFQGMQQPLLKPHVFETLRLLLVIFVVVVRFALMPIYLQSYLNLAHDK
IMDLRKEAGRITNVEFKQKISSIFYYLCVVTLQFAAPLILCLYLTLMYKS
LGGFSWSGIFRESVVLQHECAASETEGAGVAVSQGDGDFNIIESAQSLQA
SFSSLKNVFSTEVYKGFLGFATWWSYFTLFATSSLGIVYQSYFNKTASFL
DH

BO12651.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:24:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG7638-PA 496 CG7638-PA 1..496 1..496 2540 100 Plus