Clone Sequence Records
BO12749.3prime Sequence
849 bp (773 high quality bases) assembled on 2006-05-09
> BO12749.3prime
ATGGTCTAGAAAGCTTGCGTTTCCTGCAGTGCAGTCGTAAGACGCTGAGC
AAACGCTGTTGAAGGGATCGAACTGCATCTCGCCAGGACACTTCTTCGTG
TAGGCCTTCAGCTCGTCCCCTTCGGCGTAGCTGCAGACGATGAAGTGCGT
GCAGCTGCCCGTCGGGAATAGTCCGGTGGTGGCGCACACATTGTCCTCGA
TGGTGGTCTCTTCGCCGCTTTCAGTGGTCTCGGTGTTGGGCTCATCGGTA
CTGGTCTCAGCGGTTGACGGCTCGTCGGTAATGGGAGCATCAGTATCTGA
TTTATCCGTGGTGCCGGGAGCATCAGTAGTTTCTGATTTCTCAGTGGTTC
CAGGTGCATCCGTGGCTGGTTTTTCGGTGGTGCCGGGAGCATCGGTGGCG
GGCTTTTCAGTGGTTCCAGGAGCCTCAGTGGTTATTTTCTCGGTGGTTCC
AGGTGCCTCAGTGGTTATTTTCTCGGTGGTTCCAGGTGCCTCAGTGGTTA
TTTTCTCGGTGGTTCCAGGTGCCTCAGTGGTTATTTTCTCAGTGGTGCCA
GGTGCCTCAGTGGTTACTTTCTCAGTGGTGCCAGGTGCCGCAGTGGTTAC
TTTCTCGGTTGTGCCAGGTGCCTCAGTGGCTGGTTTCTCAGTGGTGCTCT
CATCCAGGTTGCTCGGCGGAATGGTAGGGTTCTCGATGTTGCTATCATCA
CGAGCCTCGAAAGCGGCAATGGACTGAACGCACTGGGCCATCGAGGAGCT
GAAGACCAGACCAGCGGGGCAGCGCAGGAAGCGCAGAGAGTAGCCACCGT
AGGCGGTTGACTGGCAGGCATAGAAGTCGGGTGTGTTATCCACTAGGGC
BO12749.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:50:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7876-PA | 927 | CG7876-RA | 94..924 | 849..19 | 4155 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:10:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Muc18B-RB | 1146 | CG7876-RB | 142..972 | 849..19 | 4155 | 100 | Minus |
| Muc18B-RA | 1068 | CG7876-RA | 142..972 | 849..19 | 4155 | 100 | Minus |
| Muc18B-RB | 1146 | CG7876-RB | 344..675 | 614..283 | 950 | 86 | Minus |
| Muc18B-RB | 1146 | CG7876-RB | 377..708 | 647..316 | 950 | 86 | Minus |
| Muc18B-RA | 1068 | CG7876-RA | 344..675 | 614..283 | 950 | 86 | Minus |
| Muc18B-RA | 1068 | CG7876-RA | 377..708 | 647..316 | 950 | 86 | Minus |
| Muc18B-RB | 1146 | CG7876-RB | 344..635 | 581..287 | 760 | 84.1 | Minus |
| Muc18B-RB | 1146 | CG7876-RB | 410..704 | 647..356 | 760 | 84.1 | Minus |
| Muc18B-RA | 1068 | CG7876-RA | 410..704 | 647..356 | 760 | 84.1 | Minus |
| Muc18B-RA | 1068 | CG7876-RA | 344..635 | 581..287 | 760 | 84.1 | Minus |
| Muc18B-RB | 1146 | CG7876-RB | 344..606 | 548..283 | 590 | 82 | Minus |
| Muc18B-RB | 1146 | CG7876-RB | 443..708 | 647..385 | 590 | 82 | Minus |
| Muc18B-RA | 1068 | CG7876-RA | 344..606 | 548..283 | 590 | 82 | Minus |
| Muc18B-RA | 1068 | CG7876-RA | 443..708 | 647..385 | 590 | 82 | Minus |
| Muc18B-RB | 1146 | CG7876-RB | 346..522 | 513..337 | 420 | 82.5 | Minus |
| Muc18B-RB | 1146 | CG7876-RB | 478..654 | 645..469 | 420 | 82.5 | Minus |
| Muc18B-RA | 1068 | CG7876-RA | 346..522 | 513..337 | 420 | 82.5 | Minus |
| Muc18B-RA | 1068 | CG7876-RA | 478..654 | 645..469 | 420 | 82.5 | Minus |
| Muc18B-RB | 1146 | CG7876-RB | 346..489 | 480..337 | 300 | 81.4 | Minus |
| Muc18B-RB | 1146 | CG7876-RB | 511..654 | 645..502 | 300 | 81.4 | Minus |
| Muc18B-RA | 1068 | CG7876-RA | 346..489 | 480..337 | 300 | 81.4 | Minus |
| Muc18B-RA | 1068 | CG7876-RA | 511..654 | 645..502 | 300 | 81.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:10:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19215656..19216486 | 849..19 | 4155 | 100 | Minus |
| X | 23542271 | X | 19215858..19216177 | 614..292 | 905 | 86.1 | Minus |
| X | 23542271 | X | 19215891..19216213 | 647..328 | 905 | 86.1 | Minus |
| X | 23542271 | X | 19215924..19216218 | 647..356 | 735 | 84.1 | Minus |
| X | 23542271 | X | 19215858..19216149 | 581..287 | 735 | 84.1 | Minus |
| X | 23542271 | X | 19215858..19216069 | 548..337 | 580 | 84.9 | Minus |
| X | 23542271 | X | 19215957..19216168 | 647..436 | 580 | 84.9 | Minus |
| X | 23542271 | X | 19215860..19216036 | 513..337 | 420 | 82.5 | Minus |
| X | 23542271 | X | 19215992..19216168 | 645..469 | 420 | 82.5 | Minus |
| X | 23542271 | X | 19215860..19216003 | 480..337 | 300 | 80.6 | Minus |
| X | 23542271 | X | 19216025..19216168 | 645..502 | 300 | 80.6 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:10:41 has no hits.
BO12749.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:44:44 Download gff for
BO12749.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7876-PA | 94..927 | 15..849 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:23:41 Download gff for
BO12749.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7876-PA | 94..927 | 15..849 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 03:52:48 Download gff for
BO12749.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Muc18B-RA | 142..978 | 10..849 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:51:25 Download gff for
BO12749.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Muc18B-RA | 142..978 | 10..849 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:51:25 Download gff for
BO12749.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19215656..19216492 | 10..849 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 03:52:48 Download gff for
BO12749.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19109689..19110525 | 10..849 | 99 | | Minus |
BO12749.5prime Sequence
863 bp (793 high quality bases) assembled on 2006-05-08
> BO12749.5prime
GAAGTTATCAGTCGACATGTTTAAGCTAACGATGCTGATGGGCCTGGCCC
TCATCCTGGCCCCATCAACGATCCAGGCCAAGTCCCTGTGCCGCAGCAGC
GGCTACTTCGCCCTAGTGGATAACACACCCGACTTCTATGCCTGCCAGTC
AACCGCCTACGGTGGCTACTCTCTGCGCTTCCTGCGCTGCCCCGCTGGTC
TGGTCTTCAGCTCCTCGATGGCCCAGTGCGTTCAGTCCATTGCCGCTTTC
GAGGCTCGTGATGATAGCAACATCGAGAACCCTACCATTCCGCCGAGCAA
CCTGGATGAGAGCACCACTGAGAAACCAGCCACTGAGGCACCTGGCACAA
CCGAGAAAGTAACCACTGCGGCACCTGGCACCACTGAGAAAGTAACCACT
GAGGCACCTGGCACCACTGAGAAAATAACCACTGAGGCACCTGGAACCAC
CGAGAAAATAACCACTGAGGCACCTGGAACCACCGAGAAAATAACCACTG
AGGCACCTGGAACCACCGAGAAAATAACCACTGAGGCTCCTGGAACCACT
GAAAAGCCCGCCACCGATGCTCCCGGCACCACCGAAAAACCAGCCACGGA
TGCACCTGGAACCACTGAGAAATCAGAAACTACTGATGCTCCCGGCACCA
CGGATAAATCAGATACTGATGCTCCCATTACCGACGAGCCGTCAACCGCT
GAGACCAGTACCGATGAGCCCAACACCGAGACCACTGAAAGCGGCGAAGA
GACCACCATCGAGGACAATGTGTGCGCCACCACCGGACTATTCCCGACGG
GCAGCTGCACGCACTTCATCGTCTGCAGCTACGCCGAAGGGGACGAGCTG
AAGGCCTACACGA
BO12749.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:50:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7876-PA | 927 | CG7876-RA | 1..847 | 17..863 | 4235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:29:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Muc18B-RB | 1146 | CG7876-RB | 45..895 | 13..863 | 4240 | 99.9 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 45..895 | 13..863 | 4240 | 99.9 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 344..675 | 345..676 | 950 | 86 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 377..708 | 312..643 | 950 | 86 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 344..675 | 345..676 | 950 | 86 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 377..708 | 312..643 | 950 | 86 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 344..635 | 378..672 | 760 | 84.1 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 410..704 | 312..603 | 760 | 84.1 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 344..635 | 378..672 | 760 | 84.1 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 410..704 | 312..603 | 760 | 84.1 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 344..606 | 411..676 | 590 | 82 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 443..708 | 312..574 | 590 | 82 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 344..606 | 411..676 | 590 | 82 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 443..708 | 312..574 | 590 | 82 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 478..654 | 314..490 | 420 | 82.5 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 346..522 | 446..622 | 420 | 82.5 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 346..522 | 446..622 | 420 | 82.5 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 478..654 | 314..490 | 420 | 82.5 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 346..489 | 479..622 | 300 | 81.4 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 511..654 | 314..457 | 300 | 81.4 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 346..489 | 479..622 | 300 | 81.4 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 511..654 | 314..457 | 300 | 81.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:29:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19215559..19216409 | 13..863 | 4240 | 99.9 | Plus |
| X | 23542271 | X | 19215858..19216177 | 345..667 | 905 | 86.1 | Plus |
| X | 23542271 | X | 19215891..19216213 | 312..631 | 905 | 86.1 | Plus |
| X | 23542271 | X | 19215858..19216149 | 378..672 | 735 | 84.1 | Plus |
| X | 23542271 | X | 19215924..19216218 | 312..603 | 735 | 84.1 | Plus |
| X | 23542271 | X | 19215858..19216069 | 411..622 | 580 | 84.9 | Plus |
| X | 23542271 | X | 19215957..19216168 | 312..523 | 580 | 84.9 | Plus |
| X | 23542271 | X | 19215860..19216036 | 446..622 | 420 | 82.5 | Plus |
| X | 23542271 | X | 19215992..19216168 | 314..490 | 420 | 82.5 | Plus |
| X | 23542271 | X | 19215860..19216003 | 479..622 | 300 | 80.6 | Plus |
| X | 23542271 | X | 19216025..19216168 | 314..457 | 300 | 80.6 | Plus |
Blast to na_te.dros performed on 2015-02-13 02:29:39 has no hits.
BO12749.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:44:45 Download gff for
BO12749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7876-PA | 1..846 | 17..862 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:23:42 Download gff for
BO12749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7876-PA | 1..846 | 17..862 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:12:03 Download gff for
BO12749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Muc18B-RA | 41..894 | 9..862 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:29:31 Download gff for
BO12749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Muc18B-RA | 41..894 | 9..862 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 06:29:31 Download gff for
BO12749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19215555..19216408 | 9..862 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:12:03 Download gff for
BO12749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19109588..19110441 | 9..862 | 99 | | Plus |
BO12749.complete Sequence
958 bp assembled on 2006-10-11
GenBank Submission: FJ632548
> BO12749.complete
GAAGTTATCAGTCGACATGTTTAAGCTAACGATGCTGATGGGCCTGGCCC
TCATCCTGGCCCCATCAACGATCCAGGCCAAGTCCCTGTGCCGCAGCAGC
GGCTACTTCGCCCTAGTGGATAACACACCCGACTTCTATGCCTGCCAGTC
AACCGCCTACGGTGGCTACTCTCTGCGCTTCCTGCGCTGCCCCGCTGGTC
TGGTCTTCAGCTCCTCGATGGCCCAGTGCGTTCAGTCCATTGCCGCTTTC
GAGGCTCGTGATGATAGCAACATCGAGAACCCTACCATTCCGCCGAGCAA
CCTGGATGAGAGCACCACTGAGAAACCAGCCACTGAGGCACCTGGCACAA
CCGAGAAAGTAACCACTGCGGCACCTGGCACCACTGAGAAAGTAACCACT
GAGGCACCTGGCACCACTGAGAAAATAACCACTGAGGCACCTGGAACCAC
CGAGAAAATAACCACTGAGGCACCTGGAACCACCGAGAAAATAACCACTG
AGGCACCTGGAACCACCGAGAAAATAACCACTGAGGCTCCTGGAACCACT
GAAAAGCCCGCCACCGATGCTCCCGGCACCACCGAAAAACCAGCCACGGA
TGCACCTGGAACCACTGAGAAATCAGAAACTACTGATGCTCCCGGCACCA
CGGATAAATCAGATACTGATGCTCCCATTACCGACGAGCCGTCAACCGCT
GAGACCAGTACCGATGAGCCCAACACCGAGACCACTGAAAGCGGCGAAGA
GACCACCATCGAGGACAATGTGTGCGCCACCACCGGACTATTCCCGACGG
GCAGCTGCACGCACTTCATCGTCTGCAGCTACGCCGAAGGGGACGAGCTG
AAGGCCTACACGAAGAAGTGTCCTGGCGAGATGCAGTTCGATCCCTTCAA
CAGCGTTTGCTCAGCGTCTTACGACTGCACTGCAGGAAACGCAAGCTTTC
TAGACCAT
BO12749.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:04:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Muc18B-RB | 927 | CG7876-PB | 1..924 | 17..940 | 4620 | 100 | Plus |
| Muc18B-RA | 927 | CG7876-PA | 1..924 | 17..940 | 4620 | 100 | Plus |
| Muc18B-RB | 927 | CG7876-PB | 296..615 | 345..667 | 905 | 86.1 | Plus |
| Muc18B-RB | 927 | CG7876-PB | 329..651 | 312..631 | 905 | 86.1 | Plus |
| Muc18B-RA | 927 | CG7876-PA | 296..615 | 345..667 | 905 | 86.1 | Plus |
| Muc18B-RA | 927 | CG7876-PA | 329..651 | 312..631 | 905 | 86.1 | Plus |
| Muc18B-RB | 927 | CG7876-PB | 296..587 | 378..672 | 735 | 84.1 | Plus |
| Muc18B-RB | 927 | CG7876-PB | 362..656 | 312..603 | 735 | 84.1 | Plus |
| Muc18B-RA | 927 | CG7876-PA | 296..587 | 378..672 | 735 | 84.1 | Plus |
| Muc18B-RA | 927 | CG7876-PA | 362..656 | 312..603 | 735 | 84.1 | Plus |
| Muc18B-RB | 927 | CG7876-PB | 296..507 | 411..622 | 580 | 84.9 | Plus |
| Muc18B-RB | 927 | CG7876-PB | 395..606 | 312..523 | 580 | 84.9 | Plus |
| Muc18B-RA | 927 | CG7876-PA | 296..507 | 411..622 | 580 | 84.9 | Plus |
| Muc18B-RA | 927 | CG7876-PA | 395..606 | 312..523 | 580 | 84.9 | Plus |
| Muc18B-RB | 927 | CG7876-PB | 298..474 | 446..622 | 420 | 82.5 | Plus |
| Muc18B-RB | 927 | CG7876-PB | 430..606 | 314..490 | 420 | 82.5 | Plus |
| Muc18B-RA | 927 | CG7876-PA | 298..474 | 446..622 | 420 | 82.5 | Plus |
| Muc18B-RA | 927 | CG7876-PA | 430..606 | 314..490 | 420 | 82.5 | Plus |
| Muc18B-RB | 927 | CG7876-PB | 298..441 | 479..622 | 300 | 80.6 | Plus |
| Muc18B-RB | 927 | CG7876-PB | 463..606 | 314..457 | 300 | 80.6 | Plus |
| Muc18B-RA | 927 | CG7876-PA | 298..441 | 479..622 | 300 | 80.6 | Plus |
| Muc18B-RA | 927 | CG7876-PA | 463..606 | 314..457 | 300 | 80.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:04:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Muc18B-RB | 1146 | CG7876-RB | 45..972 | 13..940 | 4625 | 99.9 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 45..972 | 13..940 | 4625 | 99.9 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 344..663 | 345..667 | 905 | 86.1 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 377..699 | 312..631 | 905 | 86.1 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 344..663 | 345..667 | 905 | 86.1 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 377..699 | 312..631 | 905 | 86.1 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 344..635 | 378..672 | 735 | 84.1 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 410..704 | 312..603 | 735 | 84.1 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 344..635 | 378..672 | 735 | 84.1 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 410..704 | 312..603 | 735 | 84.1 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 344..555 | 411..622 | 580 | 84.9 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 443..654 | 312..523 | 580 | 84.9 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 344..555 | 411..622 | 580 | 84.9 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 443..654 | 312..523 | 580 | 84.9 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 346..522 | 446..622 | 420 | 82.5 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 478..654 | 314..490 | 420 | 82.5 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 346..522 | 446..622 | 420 | 82.5 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 478..654 | 314..490 | 420 | 82.5 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 346..489 | 479..622 | 300 | 80.6 | Plus |
| Muc18B-RB | 1146 | CG7876-RB | 511..654 | 314..457 | 300 | 80.6 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 346..489 | 479..622 | 300 | 80.6 | Plus |
| Muc18B-RA | 1068 | CG7876-RA | 511..654 | 314..457 | 300 | 80.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:04:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19215559..19216486 | 13..940 | 4625 | 99.9 | Plus |
| X | 23542271 | X | 19215858..19216177 | 345..667 | 905 | 86.1 | Plus |
| X | 23542271 | X | 19215891..19216213 | 312..631 | 905 | 86.1 | Plus |
| X | 23542271 | X | 19215858..19216149 | 378..672 | 735 | 84.1 | Plus |
| X | 23542271 | X | 19215924..19216218 | 312..603 | 735 | 84.1 | Plus |
| X | 23542271 | X | 19215858..19216069 | 411..622 | 580 | 84.9 | Plus |
| X | 23542271 | X | 19215957..19216168 | 312..523 | 580 | 84.9 | Plus |
| X | 23542271 | X | 19215860..19216036 | 446..622 | 420 | 82.5 | Plus |
| X | 23542271 | X | 19215992..19216168 | 314..490 | 420 | 82.5 | Plus |
| X | 23542271 | X | 19215860..19216003 | 479..622 | 300 | 80.6 | Plus |
| X | 23542271 | X | 19216025..19216168 | 314..457 | 300 | 80.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:04:06 has no hits.
BO12749.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:37:28 Download gff for
BO12749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7876-RA | 1..927 | 17..944 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:59:04 Download gff for
BO12749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7876-RA | 39..976 | 9..949 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:17:07 Download gff for
BO12749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Muc18B-RA | 55..972 | 23..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:37:28 Download gff for
BO12749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7876-RA | 39..976 | 9..949 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:25:42 Download gff for
BO12749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Muc18B-RA | 55..972 | 23..942 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:25:42 Download gff for
BO12749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19215569..19216486 | 23..942 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:17:07 Download gff for
BO12749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19109602..19110519 | 23..942 | 99 | | Plus |
BO12749.pep Sequence
Translation from 16 to 958
> BO12749.pep
MFKLTMLMGLALILAPSTIQAKSLCRSSGYFALVDNTPDFYACQSTAYGG
YSLRFLRCPAGLVFSSSMAQCVQSIAAFEARDDSNIENPTIPPSNLDEST
TEKPATEAPGTTEKVTTAAPGTTEKVTTEAPGTTEKITTEAPGTTEKITT
EAPGTTEKITTEAPGTTEKITTEAPGTTEKPATDAPGTTEKPATDAPGTT
EKSETTDAPGTTDKSDTDAPITDEPSTAETSTDEPNTETTESGEETTIED
NVCATTGLFPTGSCTHFIVCSYAEGDELKAYTKKCPGEMQFDPFNSVCSA
SYDCTAGNASFLDH
BO12749.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:11:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Muc18B-PB | 308 | CG7876-PB | 1..308 | 1..308 | 1615 | 100 | Plus |
| Muc18B-PA | 308 | CG7876-PA | 1..308 | 1..308 | 1615 | 100 | Plus |
| Sgs3-PA | 307 | CG11720-PA | 84..260 | 89..262 | 233 | 38.3 | Plus |
| Sgs3-PA | 307 | CG11720-PA | 43..249 | 59..261 | 232 | 33 | Plus |
| Sgs3-PA | 307 | CG11720-PA | 98..265 | 89..257 | 228 | 38.5 | Plus |
| Sgs3-PA | 307 | CG11720-PA | 40..229 | 90..261 | 226 | 36.1 | Plus |
| Mur2B-PB | 1144 | CG14796-PB | 557..736 | 84..258 | 221 | 34.4 | Plus |
| CG43332-PA | 628 | CG43332-PA | 324..488 | 90..247 | 220 | 40.8 | Plus |
| CG43332-PA | 628 | CG43332-PA | 353..514 | 103..261 | 198 | 40.8 | Plus |
| CG43332-PA | 628 | CG43332-PA | 364..532 | 85..247 | 196 | 38.6 | Plus |
| CG43332-PA | 628 | CG43332-PA | 394..547 | 90..240 | 179 | 41.2 | Plus |
| CG43332-PA | 628 | CG43332-PA | 249..452 | 90..256 | 169 | 34.8 | Plus |
| Sgs3-PA | 307 | CG11720-PA | 27..160 | 121..256 | 157 | 36 | Plus |
