Clone Sequence Records
BO12763.5prime Sequence
389 bp (388 high quality bases) assembled on 2006-05-08
> BO12763.5prime
GAAGTTATCAGTCGACATGAAGCTCCACTGGCTGCTATTAGCAGTCGTAC
TGATCTGTGCCCTGTACAGCGCTACGGGCACCAGCCCCACCACGGAAACC
AGCACCAGCACCGAGTCGACCACCGCTACGGGCTCAAGCACTTCGACAAC
CTCGGCCAGCACCTCCTCCTCATCCTCGGACACCACCGAGGCCAGCAGCA
GCAGCAGCGATTCGTCCACCAGTTCCAGCAGCTCGTCCTCTAGCTCCAGC
AGTTCATCCAAGAAGAAGGCTGCCGCCAGAAGGAGGCGTGCCGCTCGCAG
GAGGCGTCGTGCCGCACGCAGGAGACGTGCTGCTGCCGCTCGCAGGCGCG
CCCAGCGCAGGCGCAACAGGGGTGCAAGCTTTCTAGACC
BO12763.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:51:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14265-PB | 360 | CG14265-RB | 1..357 | 17..373 | 1785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 09:15:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14265-RB | 557 | CG14265-RB | 35..391 | 17..373 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 09:14:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 3236296..3236652 | 373..17 | 1785 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 09:15:02 has no hits.
BO12763.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:45:13 Download gff for
BO12763.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14265-PB | 1..360 | 17..374 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:24:17 Download gff for
BO12763.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14265-PB | 1..360 | 17..374 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 18:17:21 Download gff for
BO12763.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14265-RB | 24..391 | 5..373 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:47:38 Download gff for
BO12763.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14265-RB | 24..391 | 5..373 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:47:38 Download gff for
BO12763.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 3236296..3236663 | 5..373 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 18:17:21 Download gff for
BO12763.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 3130329..3130696 | 5..373 | 98 | | Minus |
BO12763.3prime Sequence
389 bp (388 high quality bases) assembled on 2006-05-09
> BO12763.3prime
ATGGTCTAGAAAGCTTGCACCCCTGTTGCGCCTGCGCTGGGCGCGCCTGC
GAGCGGCAGCAGCACGTCTCCTGCGTGCGGCACGACGCCTCCTGCGAGCG
GCACGCCTCCTTCTGGCGGCAGCCTTCTTCTTGGATGAACTGCTGGAGCT
AGAGGACGAGCTGCTGGAACTGGTGGACGAATCGCTGCTGCTGCTGCTGG
CCTCGGTGGTGTCCGAGGATGAGGAGGAGGTGCTGGCCGAGGTTGTCGAA
GTGCTTGAGCCCGTAGCGGTGGTCGACTCGGTGCTGGTGCTGGTTTCCGT
GGTGGGGCTGGTGCCCGTAGCGCTGTACAGGGCACAGATCAGTACGACTG
CTAATAGCAGCCAGTGGAGCTTCATGTCGACTGATAACT
BO12763.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:51:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14265-PB | 360 | CG14265-RB | 1..357 | 375..19 | 1785 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:16:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14265-RB | 557 | CG14265-RB | 35..391 | 375..19 | 1785 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:16:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 3236296..3236652 | 19..375 | 1785 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:16:18 has no hits.
BO12763.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:45:12 Download gff for
BO12763.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14265-PB | 1..360 | 18..375 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:24:16 Download gff for
BO12763.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14265-PB | 1..360 | 18..375 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:57:01 Download gff for
BO12763.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14265-RB | 24..391 | 19..387 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:26:07 Download gff for
BO12763.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14265-RB | 24..391 | 19..387 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:26:07 Download gff for
BO12763.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 3236296..3236663 | 19..387 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:57:01 Download gff for
BO12763.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 3130329..3130696 | 19..387 | 98 | | Plus |
BO12763.complete Sequence
391 bp assembled on 2006-10-11
GenBank Submission: FJ632556
> BO12763.complete
GAAGTTATCAGTCGACATGAAGCTCCACTGGCTGCTATTAGCAGTCGTAC
TGATCTGTGCCCTGTACAGCGCTACGGGCACCAGCCCCACCACGGAAACC
AGCACCAGCACCGAGTCGACCACCGCTACGGGCTCAAGCACTTCGACAAC
CTCGGCCAGCACCTCCTCCTCATCCTCGGACACCACCGAGGCCAGCAGCA
GCAGCAGCGATTCGTCCACCAGTTCCAGCAGCTCGTCCTCTAGCTCCAGC
AGTTCATCCAAGAAGAAGGCTGCCGCCAGAAGGAGGCGTGCCGCTCGCAG
GAGGCGTCGTGCCGCACGCAGGAGACGTGCTGCTGCCGCTCGCAGGCGCG
CCCAGCGCAGGCGCAACAGGGGTGCAAGCTTTCTAGACCAT
BO12763.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:36:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14265-RB | 360 | CG14265-PB | 1..357 | 17..373 | 1785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:36:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14265-RB | 557 | CG14265-RB | 35..391 | 17..373 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:36:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 3236296..3236652 | 373..17 | 1785 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:36:02 has no hits.
BO12763.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 14:07:02 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:22:48 Download gff for
BO12763.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14265-RB | 20..387 | 5..373 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:43:31 Download gff for
BO12763.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14265-RB | 35..391 | 17..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:02 Download gff for
BO12763.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14265-RB | 20..387 | 5..373 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:11:50 Download gff for
BO12763.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14265-RB | 35..391 | 17..375 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:11:50 Download gff for
BO12763.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 3236294..3236652 | 17..375 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:43:31 Download gff for
BO12763.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 3130327..3130685 | 17..375 | 99 | | Minus |
BO12763.pep Sequence
Translation from 16 to 391
> BO12763.pep
MKLHWLLLAVVLICALYSATGTSPTTETSTSTESTTATGSSTSTTSASTS
SSSSDTTEASSSSSDSSTSSSSSSSSSSSSSKKKAAARRRRAARRRRRAA
RRRRAAAARRRAQRRRNRGASFLDH
BO12763.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:54:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14265-PB | 119 | CG14265-PB | 1..119 | 1..119 | 556 | 100 | Plus |
CG14453-PA | 133 | CG14453-PA | 1..117 | 1..118 | 238 | 49.2 | Plus |
CG32453-PB | 120 | CG32453-PB | 1..103 | 1..118 | 205 | 46.6 | Plus |
CG32453-PA | 120 | CG32453-PA | 1..103 | 1..118 | 205 | 46.6 | Plus |
CG14454-PB | 120 | CG14454-PB | 1..103 | 1..118 | 205 | 46.6 | Plus |
CG14453-PA | 133 | CG14453-PA | 44..125 | 18..118 | 181 | 45.1 | Plus |