Clone Sequence Records
BO12824.3prime Sequence
757 bp (714 high quality bases) assembled on 2006-05-08
> BO12824.3prime
ATGGTCTAGAAAGCTTGCGTAGCAGGAGTACTGCCTTTCCAGCTGGACGC
ACACATCGCACTGGAGTCGGAATCCCCAGACCAGCTTGCAATTGCACCTC
CTCTCGGTTCTCACGTGCTGGGATCTCACTCGGTATCCGCACACGCGGCA
CAACTGCTGGCAGGAGAGGCGTTCCTCCAGAGAACCACTGCCATCCTTGG
AGCACTGGCGACCCCGTGTTCCTTTCCACAATCCGGTGGCATCGCGTTCG
CAGTAGTTGGGCGAGTCCTGCATGAAGACCAGCGAGTCTAGGGGAATGTT
CTGCCACATAATCTTTAGATTGCTACTGGCTCCTTCTAGTTGGATGGCAT
CGTCGTACATTTGGAGGAGATCCTGGGCAATGGCTTCGAATGGCTTTAGT
ACCGCCACACACTCCTCCTCCTGGCATTCACCCTGCACAGCTCCTGGTTG
CTTGCACCGGCATTCCTGTTCCAGTGATCTTTGTAGTAGAGCTCCCACCA
CCCGTCGATTGTGACCGATGGCTCCTGATCCCGATCCGAAATGCTTCTCG
TACTGCTCCAGTGCCTTGGTGGGTTCGTGGGCACAGGGTACATTCAGAGC
ATTTTCCGTGCATCCGCATCCGGCGATTACTCCATTGGCACAGTCCTTGG
TCAGAGTATGGACTATGGCTGCCATGGAAATGGCCGCCACATAGACATCC
TCCCGATTTGGTGAGTTTTCCTCCGGCTTGGAATTCTTCTGCACGAAATC
CTGGCTC
BO12824.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:52:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8458-PA | 930 | wntD-RA | 189..927 | 757..19 | 3695 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:24:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wntD-RA | 1147 | CG8458-RA | 249..987 | 757..19 | 3695 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:23:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13292212..13292950 | 19..757 | 3695 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:24:01 has no hits.
BO12824.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:46:55 Download gff for
BO12824.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-PA | 189..930 | 15..757 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:26:33 Download gff for
BO12824.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8458-PA | 189..930 | 15..757 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:25:39 Download gff for
BO12824.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 249..990 | 15..757 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:46:18 Download gff for
BO12824.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 249..990 | 15..757 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:46:18 Download gff for
BO12824.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13292208..13292950 | 15..757 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:25:39 Download gff for
BO12824.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9117930..9118672 | 15..757 | 99 | | Plus |
BO12824.5prime Sequence
723 bp (721 high quality bases) assembled on 2006-05-08
> BO12824.5prime
GAAGTTATCAGTCGACATGATTTTTGCCATCACATTCTTCATGGGTATTA
CGAGCACTCTGGCAGCAGTTTTGGAGCCCATGAGCTACTACCAGTACACC
CAGTTCCAGGCACCACTCTCCTGGGAGGATATAACCGGCAAGGGGCTGAA
ACAGGCCCTCGACAGCTGCCAACAGAGTTTCCAGTGGCAGCGATGGAACT
GTCCGAGCCAGGATTTCGTGCAGAAGAATTCCAAGCCGGAGGAAAACTCA
CCAAATCGGGAGGATGTCTATGTGGCGGCCATTTCCATGGCAGCCATAGT
CCATACTCTGACCAAGGACTGTGCCAATGGAGTAATCGCCGGATGCGGAT
GCACGGAAAATGCTCTGAATGTACCCTGTGCCCACGAACCCACCAAGGCA
CTGGAGCAGTACGAGAAGCATTTCGGATCGGGATCAGGAGCCATCGGTCA
CAATCGACGGGTGGTGGGAGCTCTACTACAAAGATCACTGGAACAGGAAT
GCCGGTGCAAGCAACCAGGAGCTGTGCAGGGTGAATGCCAGGAGGAGGAG
TGTGTGGCGGTACTAAAGCCATTCGAAGCCATTGCCCAGGATCTCCTCCA
AATGTACGACGATGCCATCCAACTAGAAGGAGCCAGTAGCAATCTAAAGA
TTATGTGGCAGAACATTCCCCTAGACTCGCTGGTCTTCATGCAGGACTCG
CCCAACTACTGCGAACGCGATGC
BO12824.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:52:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8458-PA | 930 | wntD-RA | 1..707 | 17..723 | 3535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:23:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wntD-RA | 1147 | CG8458-RA | 59..767 | 15..723 | 3545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:23:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13292432..13293140 | 723..15 | 3545 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:23:54 has no hits.
BO12824.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:46:56 Download gff for
BO12824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-PA | 1..707 | 17..723 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:26:35 Download gff for
BO12824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8458-PA | 1..707 | 17..723 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:17:26 Download gff for
BO12824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 53..767 | 9..723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 21:06:23 Download gff for
BO12824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 53..767 | 9..723 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 21:06:23 Download gff for
BO12824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13292432..13293143 | 11..723 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:17:26 Download gff for
BO12824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9118154..9118865 | 11..723 | 99 | <- | Minus |
BO12824.complete Sequence
961 bp assembled on 2006-10-11
GenBank Submission: FJ632588
> BO12824.complete
GAAGTTATCAGTCGACATGATTTTTGCCATCACATTCTTCATGGGTATTA
CGAGCACTCTGGCAGCAGTTTTGGAGCCCATGAGCTACTACCAGTACACC
CAGTTCCAGGCACCACTCTCCTGGGAGGATATAACCGGCAAGGGGCTGAA
ACAGGCCCTCGACAGCTGCCAACAGAGTTTCCAGTGGCAGCGATGGAACT
GTCCGAGCCAGGATTTCGTGCAGAAGAATTCCAAGCCGGAGGAAAACTCA
CCAAATCGGGAGGATGTCTATGTGGCGGCCATTTCCATGGCAGCCATAGT
CCATACTCTGACCAAGGACTGTGCCAATGGAGTAATCGCCGGATGCGGAT
GCACGGAAAATGCTCTGAATGTACCCTGTGCCCACGAACCCACCAAGGCA
CTGGAGCAGTACGAGAAGCATTTCGGATCGGGATCAGGAGCCATCGGTCA
CAATCGACGGGTGGTGGGAGCTCTACTACAAAGATCACTGGAACAGGAAT
GCCGGTGCAAGCAACCAGGAGCTGTGCAGGGTGAATGCCAGGAGGAGGAG
TGTGTGGCGGTACTAAAGCCATTCGAAGCCATTGCCCAGGATCTCCTCCA
AATGTACGACGATGCCATCCAACTAGAAGGAGCCAGTAGCAATCTAAAGA
TTATGTGGCAGAACATTCCCCTAGACTCGCTGGTCTTCATGCAGGACTCG
CCCAACTACTGCGAACGCGATGCCACCGGATTGTGGAAAGGAACACGGGG
TCGCCAGTGCTCCAAGGATGGCAGTGGTTCTCTGGAGGAACGCCTCTCCT
GCCAGCAGTTGTGCCGCGTGTGCGGATACCGAGTGAGATCCCAGCACGTG
AGAACCGAGAGGAGGTGCAATTGCAAGCTGGTCTGGGGATTCCGACTCCA
GTGCGATGTGTGCGTCCAGCTGGAAAGGCAGTACTCCTGCTACGCAAGCT
TTCTAGACCAT
BO12824.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:11:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wntD-RA | 930 | CG8458-PA | 1..927 | 17..943 | 4635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:11:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wntD-RA | 1147 | CG8458-RA | 59..987 | 15..943 | 4645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:11:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13292212..13293140 | 943..15 | 4645 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:11:33 has no hits.
BO12824.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:37:00 Download gff for
BO12824.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 1..930 | 17..947 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:58:31 Download gff for
BO12824.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 53..990 | 9..947 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:05:25 Download gff for
BO12824.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 61..987 | 17..945 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:37:00 Download gff for
BO12824.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 53..990 | 9..947 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:12:53 Download gff for
BO12824.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 61..987 | 17..945 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:12:53 Download gff for
BO12824.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13292210..13293138 | 17..945 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:05:25 Download gff for
BO12824.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9117932..9118860 | 17..945 | 99 | | Minus |
BO12824.pep Sequence
Translation from 16 to 961
> BO12824.pep
MIFAITFFMGITSTLAAVLEPMSYYQYTQFQAPLSWEDITGKGLKQALDS
CQQSFQWQRWNCPSQDFVQKNSKPEENSPNREDVYVAAISMAAIVHTLTK
DCANGVIAGCGCTENALNVPCAHEPTKALEQYEKHFGSGSGAIGHNRRVV
GALLQRSLEQECRCKQPGAVQGECQEEECVAVLKPFEAIAQDLLQMYDDA
IQLEGASSNLKIMWQNIPLDSLVFMQDSPNYCERDATGLWKGTRGRQCSK
DGSGSLEERLSCQQLCRVCGYRVRSQHVRTERRCNCKLVWGFRLQCDVCV
QLERQYSCYASFLDH
BO12824.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wntD-PA | 309 | CG8458-PA | 1..309 | 1..309 | 1673 | 100 | Plus |
| Wnt2-PB | 325 | CG1916-PB | 28..324 | 41..308 | 273 | 27.3 | Plus |
| Wnt2-PA | 352 | CG1916-PA | 55..351 | 41..308 | 273 | 27.3 | Plus |
| Wnt4-PB | 539 | CG4698-PB | 270..538 | 47..308 | 190 | 24.6 | Plus |
| Wnt4-PA | 539 | CG4698-PA | 270..538 | 47..308 | 190 | 24.6 | Plus |
