Clone Sequence Records
BO12844.3prime Sequence
830 bp (741 high quality bases) assembled on 2006-05-08
> BO12844.3prime
ATGGTCTAGAAAGCTTGCTGGCCTATGGAATCTCGTCAAATGCCGACTGC
CCTCGTGGACGGCCATTTCGGAGGACTTGAACTCGTTCAGCTCCTTGCGA
ATGGCGGCCTTGTCCTTTGGCGTCAGTCTTGTCCACGGCTTGTCCGCCCG
CCGATCGTAGTCGTGGGCCTGCGTGACCTCGATGTAGTCGTTGAATCGGA
TGATCTTCTTCTCCTTCAGCTCCTCGACGGTCGGCCGAAAGCTGAGTTTG
CGCAACAGATACGACTTCTTCTCCTCCTTCTGCTTCTTCTCCTCGGCGGG
TGATTGAGTTTTCAAGATGTTGCGCTCGACCAGCTCCTCGGCCGTGGGTC
GCATGGACAGCCGCCGGATGAGGCGTGCTCCGATCGCCTCCTTGGACTCC
TTGAGCTCGTTGTCGTTGACCTGGTGCAGGATGTTGCGGTTGATCAGGTC
CTGCTTGTCCGGTCGGAGCTGCAGCTTCAGGGACAGCGACTCCTTGCGGG
CCAGTTTGGCCAGCCGGGTGTTGTCGTTGTCCTCGTCCCTGTAGACGATA
TGGCCATCGCTGTCGTCACTATCGCTGCTGCTTTCGCGTATCACAAATGG
CCGGGCGTTCTCCTTGTTCTCCACGGTGCACGGCAATTGGATGTTGAACA
TTTGCTGCCTGCATAGTCTAATCCGTGGTCGTAGTATTGGCTTGAGCGAA
TAGTTATTGCCCGCCGCATCCTGGCGAACGACCAGCGGTCGTTGGTTGGC
GGATTGTTGGGCCGCAGCTGCGGCAGCTGCCGCCATCGAGCCAATACCGC
CATTGCTGGTTGCCATGGCCGCTGCCGTTG
BO12844.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:52:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32264-PD | 3027 | CG32264-RD | 2213..3024 | 830..19 | 4035 | 99.8 | Minus |
| CG32264-PC | 2310 | CG32264-RC | 1496..2307 | 830..19 | 4035 | 99.8 | Minus |
| CG32264-PA | 2814 | CG32264-RA | 2000..2811 | 830..19 | 4035 | 99.8 | Minus |
| CG32264-PB | 2373 | CG32264-RB | 1728..2370 | 661..19 | 3215 | 100 | Minus |
| CG32264-PB | 2373 | CG32264-RB | 1589..1727 | 830..692 | 670 | 99.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:20:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32264-RD | 3788 | CG32264-RD | 2799..3610 | 830..19 | 4045 | 99.9 | Minus |
| CG32264-RI | 3797 | CG32264-RI | 2808..3619 | 830..19 | 4045 | 99.9 | Minus |
| CG32264-RM | 3767 | CG32264-RM | 2947..3589 | 661..19 | 3215 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:20:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3718638..3718991 | 309..662 | 1770 | 100 | Plus |
| 3L | 28110227 | 3L | 3718196..3718472 | 32..308 | 1385 | 100 | Plus |
| 3L | 28110227 | 3L | 3722155..3722294 | 691..830 | 685 | 99.3 | Plus |
Blast to na_te.dros performed 2015-02-11 10:20:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Damb\P-element_T | 3329 | Damb\P-element_T P_T 3329bp Derived from AF012414. | 877..942 | 546..611 | 123 | 65.2 | Plus |
BO12844.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:47:31 Download gff for
BO12844.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-PA | 2000..2814 | 16..830 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:27:21 Download gff for
BO12844.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-PA | 2000..2814 | 16..830 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 05:03:15 Download gff for
BO12844.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-RD | 2799..3618 | 11..830 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:17:39 Download gff for
BO12844.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-RD | 2799..3618 | 11..830 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:17:39 Download gff for
BO12844.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3718196..3718472 | 32..308 | 100 | <- | Plus |
| 3L | 3718638..3718990 | 309..661 | 100 | <- | Plus |
| 3L | 3721537..3721566 | 662..691 | 100 | <- | Plus |
| 3L | 3722156..3722294 | 692..830 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 05:03:15 Download gff for
BO12844.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3718196..3718472 | 32..308 | 100 | <- | Plus |
| arm_3L | 3718638..3718990 | 309..661 | 100 | <- | Plus |
| arm_3L | 3721537..3721566 | 662..691 | 100 | <- | Plus |
| arm_3L | 3722156..3722294 | 692..830 | 99 | | Plus |
BO12844.5prime Sequence
866 bp (741 high quality bases) assembled on 2006-05-08
> BO12844.5prime
GAAGTTATCAGTCGACATGGCAGCGGTGCAGCAGCAGCAGCACCACCAGC
GGCAGTTGCTGCACCACCAGCACTCCCATCCGCCCTTCCAAGCCACCCAG
CAGCACCAGCCCGCGCAGCAGCAGCAGCAGCAGCAGCATCAAACGGTGCA
GCAGCAGCAGCAACAGCAGCAGCAGCGCTTGCACCACTCGCACCACCCAC
CGCTGCAGCACCACCTGTCGCTGGGTGGCTACCAGCAACTGCAGCTGCAG
ATGCAGGCCAACAGGAATCAGTACTCCACGCCGCAGCATCACTATCGCAA
TGCAACCAATGCTGCAGCGGCCGCAGCTGCAACATCGGCGAATGCTGCCA
CCATTAGACGCCGCACCTTGAGTCACGTATCGCGCTCTTACTCCCTGGGC
ACAGCGGCGGCCAACGCAGCAGCAGCCGCAGCAGCAGCAGCAGCAACAGC
AGCGGCCACAACTGCAGCAGCCACAACTGCAACATCATCGGCCAGTAGCA
ACAATCAACTGAGTATCCACAAAACTGGGATCATGGTCGCCGCCTCACGA
TGTCGAAGTCCCATAATGCTGTGCCACAGTCACAGCGACGGCGAGTTTCC
ACTGTACCGAGCTAAGAAACAGAATGGAGCTGCCATACGCACAAATAGCC
TGGGTTCGGGCACTAGGACGCCACCTTTGGAAAGGAAGAGCAAACTCAGT
GCCCTGGGCAGATTCTTTAAGCCCTGGAAATGGCGACGGAAAAAGAAGAG
CGAGAAGTTCGAGGCGGCCTCCAAATCCCTGGAGCGTAAGATTTCTGTGC
GTGCCAATCGCGATGAGCTAGTGCAAAAGGGGATTCTAATGCCTGAGAGT
CCCCTGGGCAATATTC
BO12844.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:52:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32264-PA | 2814 | CG32264-RA | 1..850 | 17..866 | 4225 | 99.8 | Plus |
| CG32264-PC | 2310 | CG32264-RC | 89..346 | 609..866 | 1265 | 99.6 | Plus |
| CG32264-PD | 3027 | CG32264-RD | 808..1063 | 611..866 | 1255 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:55:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32264-RM | 3767 | CG32264-RM | 809..1658 | 17..866 | 4235 | 99.9 | Plus |
| CG32264-RI | 3797 | CG32264-RI | 809..1658 | 17..866 | 4235 | 99.9 | Plus |
| CG32264-RL | 2798 | CG32264-RL | 432..689 | 609..866 | 1275 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:55:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3799886..3800480 | 611..17 | 2975 | 100 | Minus |
| 3L | 28110227 | 3L | 3769242..3769408 | 776..610 | 835 | 100 | Minus |
| 3L | 28110227 | 3L | 3769087..3769176 | 866..777 | 435 | 98.9 | Minus |
Blast to na_te.dros performed 2015-02-11 16:55:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3239..3322 | 401..487 | 184 | 71.3 | Plus |
BO12844.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:47:33 Download gff for
BO12844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-PA | 1..850 | 17..866 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:27:23 Download gff for
BO12844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-PA | 1..850 | 17..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:07:58 Download gff for
BO12844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-RI | 804..1658 | 12..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:55:00 Download gff for
BO12844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-RI | 804..1658 | 12..866 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:55:00 Download gff for
BO12844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3769087..3769176 | 777..866 | 98 | <- | Minus |
| 3L | 3769242..3769406 | 612..776 | 100 | <- | Minus |
| 3L | 3799886..3800485 | 12..611 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:07:58 Download gff for
BO12844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3769087..3769176 | 777..866 | 98 | <- | Minus |
| arm_3L | 3769242..3769406 | 612..776 | 100 | <- | Minus |
| arm_3L | 3799886..3800485 | 12..611 | 99 | | Minus |
BO12844.complete Sequence
2845 bp assembled on 2008-01-17
GenBank Submission: FJ632601
> BO12844.complete
GAAGTTATCAGTCGACATGGCAGCGGTGCAGCAGCAGCAGCACCACCAGC
GGCAGTTGCTGCACCACCAGCACTCCCATCCGCCCTTCCAAGCCACCCAG
CAGCACCAGCCCGCGCAGCAGCAGCAGCAGCAGCAGCATCAAACGGTGCA
GCAGCAGCAGCAACAGCAGCAGCAGCGCTTGCACCACTCGCACCACCCAC
CGCTGCAGCACCACCTGTCGCTGGGTGGCTACCAGCAACTGCAGCTGCAG
ATGCAGGCCAACAGGAATCAGTACTCCACGCCGCAGCATCACTATCGCAA
TGCAACCAATGCTGCAGCGGCCGCAGCTGCAACATCGGCGAATGCTGCCA
CCATTAGACGCCGCACCTTGAGTCACGTATCGCGCTCTTACTCCCTGGGC
ACAGCGGCGGCCAACGCAGCAGCAGCCGCAGCAGCAGCAGCAGCAACAGC
AGCGGCCACAACTGCAGCAGCCACAACTGCAACATCATCGGCCAGTAGCA
ACAATCAACTGAGTATCCACAAAACTGGGATCATGGTCGCCGCCTCACGA
TGTCGAAGTCCCATAATGCTGTGCCACAGTCACAGCGACGGCGAGTTTCC
ACTGTACCGAGCTAAGAAACAGAATGGAGCTGCCATACGCACAAATAGCC
TGGGTTCGGGCACTAGGACGCCACCTTTGGAAAGGAAGAGCAAACTCAGT
GCCCTGGGCAGATTCTTTAAGCCCTGGAAATGGCGACGGAAAAAGAAGAG
CGAGAAGTTCGAGGCGGCCTCCAAATCCCTGGAGCGTAAGATTTCTGTGC
GTGCCAATCGTGATGAGCTAGTGCAAAAGGGGATTCTAATGCCTGAGAGT
CCCCTGGGCAATATTCCAGAACCAGGCGAGGAGTCGTATTATAACAACAG
CAATAGTGGAGCCACCGCGAATGGATCCCTGCTCAACTCAGCCGTCCACA
ATAATTCCATGAGCCAGGCCAATAATTCCATAAATGCCACCACCGGCAAT
CCGCTCATCTCCGCCGCCCAGCAGCAGCTGAACCAGGGACTTCCCAACTC
GATCTCCGTGCAGCAGTTCAACGGTCAGAACCAGAATCCACAGAATTCCA
TGGCCAATGGCCTAGTGGGTGGCGGCGGCGGCGGTGGAGACGGTTCCTCG
GACACGTCTTCCCTCAGCGGCGGCGTTCCGCACTCGCAGTCGGCGCCCCA
GCAACTGGGGGTGGGGCAACCACCACCACCCCTAACACCACTGGCCCAGC
ACCACCAGGCGCTGGCACAGCAGCTGCAGCAGCGATTCGCCATCAGCAAC
AATAACGAACCAAGAAAAGACAAGACTGATGCACAACAACAACAACACGG
AGGCAATGGCACAATATCCACGCCCAACATCGAGCAGCCCACCTGCCAGG
GCTCGATGCTGCCGCCCCCCGGAGGCGGTGGCCATCACCAGGTGGACGGG
AGTGGCAAGATGGAGCGGCCCAACACGCTCGCCGGCGCCAATAAGCTGAC
CCGTCGCGGGGTCAACATCTGCTATCACAACGAGCACATGTATGGCGAAG
ATGGAAAAATGGTGGGTGGTCCGCCGGGCAGCACTCCGCCCCCGTATCCG
GGTGGCAAACTACCGCCGGGCGTAATGCTCAGCGAGCTGCCGGAGCCGCC
GATTCCGCTGTCGGAGATCGGACCGATCCCACCGCCCCCGATGTTCTCCA
CTCCGAGTCCCACGCTCATCGCAGGACGACCGCACGGGCCAGGGGCCGTC
AACGATCAGGATTATCAGCAGGACTACGACTACGATGATAACGATCCCGA
TCAGGATGAGCTTGACTCGGACGATGAGTACGCCCCGTATGGTGGCAACC
ATGTGCGCATGATGGACACGCAACGCGTCGAGGAAATTCCAGCCAAAGAG
CCCAAACCAAATGCAGTTCCTCTCAAGTCGGCGCTGAAGAAGAAGGGCGG
TATGCAGCCCGCTTCCGCCTCCACGCCGGTCACGCCCACCCAGGAACATG
GAGCGGGAAGTGCGGCAACGGCAGCGGCCATGGCAAACAGCAATGGCGGT
ATTGGCTCGATGGCGGCAGCTGCCGCAGCTGCGGCCCAACAATCCGCCAA
CCAACGACCGCTGGTCGTTCGCCAGGATGCGGCGGGCAATAACTATTCGC
TCAAGCCAATACTACGACCACGGATTAGACTATGCAGGCAGCAAATGTTC
AACATCCAATTGCCGTGCACCGTGGAGAACAAGGAGAACGCCCGGCCATT
TGTGATACGCGAAAGCAGCAGCGATAGTGACGACAGCGATGGCCATATCG
TCTACAGGGACGAGGACAACGACAACACCCGGCTGGCCAAACTGGCCCGC
AAGGAGTCGCTGTCCCTGAAGCTGCAGCTCCGACCGGACAAGCAGGACCT
GATCAACCGCAACATCCTGCACCAGGTCAACGACAACGAGCTCAAGGAGT
CCAAGGAGGCGATCGGAGCACGCCTCATCCGGCGGCTGTCCATGCGACCC
ACGGCCGAGGAGCTGGTCGAGCGCAACATCTTGAAAACTCAATCACCCGC
CGAGGAGAAGAAGCAGAAGGAGGAGAAGAAGTCGTATCTGTTGCGCAAAC
TCAGCTTTCGGCCGACCGTCGAGGAGCTGAAGGAGAAGAAGATCATCCGA
TTCAACGACTACATCGAGGTCACGCAGGCCCACGACTACGATCGGCGGGC
GGACAAGCCGTGGACAAGACTGACGCCAAAGGACAAGGCCGCCATTCGCA
AGGAGCTGAACGAGTTCAAGTCCTCCGAAATGGCCGTCCACGAGGGCAGT
CGGCATTTGACGAGATTCCATAGGCCAGCAAGCTTTCTAGACCAT
BO12844.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:35:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32264-RI | 2814 | CG32264-PI | 1..2811 | 17..2827 | 14040 | 100 | Plus |
| CG32264-RD | 3027 | CG32264-PD | 808..3024 | 611..2827 | 11070 | 100 | Plus |
| CG32264-RM | 2784 | CG32264-PM | 1..2138 | 17..2154 | 10675 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:35:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32264-RI | 3797 | CG32264-RI | 809..3619 | 17..2827 | 14040 | 100 | Plus |
| CG32264-RD | 3788 | CG32264-RD | 1394..3610 | 611..2827 | 11070 | 100 | Plus |
| CG32264-RM | 3767 | CG32264-RM | 809..2946 | 17..2154 | 10675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:35:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3799886..3800480 | 611..17 | 2975 | 100 | Minus |
| 3L | 28110227 | 3L | 3767137..3767571 | 1307..873 | 2175 | 100 | Minus |
| 3L | 28110227 | 3L | 3722155..3722523 | 2155..1787 | 1845 | 100 | Minus |
| 3L | 28110227 | 3L | 3718638..3718991 | 2537..2184 | 1770 | 100 | Minus |
| 3L | 28110227 | 3L | 3718196..3718472 | 2814..2538 | 1385 | 100 | Minus |
| 3L | 28110227 | 3L | 3722856..3723105 | 1791..1542 | 1220 | 99.2 | Minus |
| 3L | 28110227 | 3L | 3723639..3723873 | 1541..1307 | 1175 | 100 | Minus |
| 3L | 28110227 | 3L | 3769242..3769408 | 776..610 | 835 | 100 | Minus |
| 3L | 28110227 | 3L | 3769077..3769176 | 876..777 | 500 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 05:35:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3239..3322 | 401..487 | 184 | 71.3 | Plus |
| Damb\P-element_T | 3329 | Damb\P-element_T P_T 3329bp Derived from AF012414. | 877..942 | 2300..2235 | 123 | 65.2 | Minus |
BO12844.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:01:01 Download gff for
BO12844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-RA | 1..2814 | 17..2830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:35:07 Download gff for
BO12844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-RA | 809..3619 | 17..2829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:11:09 Download gff for
BO12844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-RI | 809..3619 | 17..2829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:01:02 Download gff for
BO12844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-RA | 804..3627 | 12..2835 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:14:20 Download gff for
BO12844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-RI | 809..3619 | 17..2829 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:14:20 Download gff for
BO12844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3718196..3718472 | 2538..2814 | 100 | <- | Minus |
| 3L | 3718638..3718990 | 2185..2537 | 100 | <- | Minus |
| 3L | 3721537..3721566 | 2155..2184 | 100 | <- | Minus |
| 3L | 3722156..3722522 | 1788..2154 | 100 | <- | Minus |
| 3L | 3722860..3723105 | 1542..1787 | 99 | <- | Minus |
| 3L | 3723639..3723872 | 1308..1541 | 100 | <- | Minus |
| 3L | 3767137..3767568 | 876..1307 | 100 | <- | Minus |
| 3L | 3769078..3769176 | 777..875 | 100 | <- | Minus |
| 3L | 3769242..3769406 | 612..776 | 100 | <- | Minus |
| 3L | 3799886..3800480 | 17..611 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:11:09 Download gff for
BO12844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3718196..3718472 | 2538..2814 | 100 | <- | Minus |
| arm_3L | 3718638..3718990 | 2185..2537 | 100 | <- | Minus |
| arm_3L | 3721537..3721566 | 2155..2184 | 100 | <- | Minus |
| arm_3L | 3722156..3722522 | 1788..2154 | 100 | <- | Minus |
| arm_3L | 3722860..3723105 | 1542..1787 | 99 | <- | Minus |
| arm_3L | 3723639..3723872 | 1308..1541 | 100 | <- | Minus |
| arm_3L | 3767137..3767568 | 876..1307 | 100 | <- | Minus |
| arm_3L | 3769078..3769176 | 777..875 | 100 | <- | Minus |
| arm_3L | 3769242..3769406 | 612..776 | 100 | <- | Minus |
| arm_3L | 3799886..3800480 | 17..611 | 100 | | Minus |
BO12844.pep Sequence
Translation from 16 to 2845
> BO12844.pep
MAAVQQQQHHQRQLLHHQHSHPPFQATQQHQPAQQQQQQQHQTVQQQQQQ
QQQRLHHSHHPPLQHHLSLGGYQQLQLQMQANRNQYSTPQHHYRNATNAA
AAAAATSANAATIRRRTLSHVSRSYSLGTAAANAAAAAAAAAATAAATTA
AATTATSSASSNNQLSIHKTGIMVAASRCRSPIMLCHSHSDGEFPLYRAK
KQNGAAIRTNSLGSGTRTPPLERKSKLSALGRFFKPWKWRRKKKSEKFEA
ASKSLERKISVRANRDELVQKGILMPESPLGNIPEPGEESYYNNSNSGAT
ANGSLLNSAVHNNSMSQANNSINATTGNPLISAAQQQLNQGLPNSISVQQ
FNGQNQNPQNSMANGLVGGGGGGGDGSSDTSSLSGGVPHSQSAPQQLGVG
QPPPPLTPLAQHHQALAQQLQQRFAISNNNEPRKDKTDAQQQQHGGNGTI
STPNIEQPTCQGSMLPPPGGGGHHQVDGSGKMERPNTLAGANKLTRRGVN
ICYHNEHMYGEDGKMVGGPPGSTPPPYPGGKLPPGVMLSELPEPPIPLSE
IGPIPPPPMFSTPSPTLIAGRPHGPGAVNDQDYQQDYDYDDNDPDQDELD
SDDEYAPYGGNHVRMMDTQRVEEIPAKEPKPNAVPLKSALKKKGGMQPAS
ASTPVTPTQEHGAGSAATAAAMANSNGGIGSMAAAAAAAAQQSANQRPLV
VRQDAAGNNYSLKPILRPRIRLCRQQMFNIQLPCTVENKENARPFVIRES
SSDSDDSDGHIVYRDEDNDNTRLAKLARKESLSLKLQLRPDKQDLINRNI
LHQVNDNELKESKEAIGARLIRRLSMRPTAEELVERNILKTQSPAEEKKQ
KEEKKSYLLRKLSFRPTVEELKEKKIIRFNDYIEVTQAHDYDRRADKPWT
RLTPKDKAAIRKELNEFKSSEMAVHEGSRHLTRFHRPASFLDH
BO12844.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:24:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32264-PI | 937 | CG32264-PI | 1..937 | 1..937 | 4894 | 100 | Plus |
| CG32264-PM | 927 | CG32264-PM | 1..927 | 1..937 | 4814 | 98.8 | Plus |
| CG32264-PD | 1008 | CG32264-PD | 133..1008 | 47..937 | 3892 | 84.4 | Plus |
| CG32264-PE | 998 | CG32264-PE | 133..998 | 47..937 | 3812 | 83.2 | Plus |
| CG32264-PL | 759 | CG32264-PL | 30..759 | 198..937 | 3797 | 98.5 | Plus |
