Clone Sequence Records
BO13072.3prime Sequence
693 bp (688 high quality bases) assembled on 2006-05-08
> BO13072.3prime
ATGGTCTAGAAAGCTTGCGTAAGTCACCGGCGGATAGGACATATATTTGT
CGCTCATATTAAAGTATGATCCATCTGCTGGCGGCGCTGGCGATGGTGAG
GATATGTAGCTACCCTTGATCACCAGGGAGGAGGCCGGCGACGGTGATGG
TATGTACAGTCCGTTGGAGATCAGCATATGATCGTCCTTGGAGCGCATCT
GCATGCCCTCGATCATGCCCGTGGCACTGTTCCGCTGACTGTGCCGCTTG
GGATTCGGCAGGGTCCGGGTGAAGTCCGGATTGCAGAGCGGATAGGGCGG
GGTGCACATGGAGCTCTCCTGATATTTCGGCGGATACGCCGTCGACTGGA
TAATGTCCACGTTCTCCACGAGATATGTGGAGGCGGCTGCTTTCTTCTGA
ACATCCGCCTTGTAGACAGACTGACTGTCATCCTTGGAGTACACATCATC
GTTGCTCGGCTCCGCTTCGCTCTGAGATTTGTTCTGCCGGCGGATCACGA
ACCAGGCTACCAGGGCAGCGTTCAGAACCAACAAAACCATGGCTGCTGAG
GTGATTCCAATGATCATCACATTGGGCAGTTCGTCTTTTTCGGTGTACTC
CGCCGAATGGGGCTGCGATCCCTTGCTGAGGGTCAACTTGATATCGGGCA
TGAATTTACTGCCTCCCGCTTCATTGGCGGCCATCACGGAGAA
BO13072.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:57:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7449-PA | 3687 | hbs-RA | 3010..3684 | 693..19 | 3350 | 99.8 | Minus |
CG7449-PB | 3708 | hbs-RB | 3314..3705 | 410..19 | 1960 | 100 | Minus |
CG7449-PB | 3708 | hbs-RB | 3010..3294 | 693..409 | 1400 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:37:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hbs-RA | 4701 | CG7449-RA | 3405..4079 | 693..19 | 3360 | 99.9 | Minus |
hbs-RC | 5478 | CG7449-RC | 3405..4100 | 693..19 | 3140 | 96.8 | Minus |
hbs-RB | 4722 | CG7449-RB | 3405..4100 | 693..19 | 3140 | 96.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:37:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15040136..15040521 | 410..25 | 1930 | 100 | Minus |
2R | 25286936 | 2R | 15039766..15040051 | 693..408 | 1415 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:37:11 has no hits.
BO13072.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:54:07 Download gff for
BO13072.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hbs-PA | 3012..3687 | 15..691 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:36:19 Download gff for
BO13072.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7449-PA | 3012..3687 | 15..691 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 22:48:41 Download gff for
BO13072.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hbs-RA | 3405..4084 | 13..693 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:06:39 Download gff for
BO13072.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hbs-RA | 3405..4084 | 13..693 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:06:39 Download gff for
BO13072.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15039766..15040050 | 409..693 | 99 | -> | Minus |
2R | 15040138..15040521 | 25..408 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 22:48:41 Download gff for
BO13072.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10927271..10927555 | 409..693 | 99 | -> | Minus |
arm_2R | 10927643..10928026 | 25..408 | 100 | | Minus |
BO13072.5prime Sequence
893 bp (807 high quality bases) assembled on 2006-05-08
> BO13072.5prime
GAAGTTATCAGTCGACATGCAGTTTTGGATAACTCTGACATTTGCCGTGC
ACTTGGCTACGACCATCTGCCACGTAATGGCCGCAGTTACTGCTCCAACT
CCGGCTGCTCAGGTGGCAGCCCCACCTGTGCAAAAGTTTCACCTGACGCC
CCACGATCTGCAGATACTCGAGGGCACCGACACCCTCCTGCGCTGCGAGG
TATCGAACCGGGCGGGCAAAGTCCAGTGGACCAAGGATGGCTTTGCGCTG
GGATTCTCGGCCGTAATTCCCGGATTCCCACGCTATTCTGTGCTGGTGGA
TGCCAAACAGAATGCCTACAATCTGCAGATCAAGAACGCCACGCTGGAGG
ACGATGCCGAATACCAATGCCAGGTGGGTCCTGCTGCTGGAAATCCCGCC
ATTCGTGCCAATGCCAAGTTGAGCATAGTGGCTGCTCCGAGTAGCATCGT
TATCGAGGGCTATGCCCGGAATGCCCGAGTGGAGGTGGAGGAGCGCCAGA
ATCTTACGCTGCACTGTATCGCCGAGAACGCCAATCCGGCGGCGGAGATT
GTCTGGTTCCAGGGCGAAGTTCCAGTCTCCACGGCCCCCATCGTGACGGT
GAATCAAACTGCCCCGAAGCGATTCACAACTAGCTCCACTTTGCACCTGC
AGCCGCGCGCCGAAGACGATTACAAGGAGTTCTCCTGCGAGGCGCGTCAC
AAGGCTCTGCCCCCCGATGTACCGATGCGCGCCCAGGTGCAGCTCTCCGT
ACTCTATCCGCCCGGCGCTCCGTTCTTTGAGGGCTACAGCCAGGGTGAGA
CCCTGCATCGCGGCCAGGAAGTTCAAATCGCCTGTCGAACCCGCGGCGGC
AATCCCCCGGCCCAATTGACTTGGTACCGAAATGGCGTGGCCA
BO13072.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:57:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7449-PA | 3687 | hbs-RA | 1..877 | 17..893 | 4360 | 99.8 | Plus |
CG7449-PB | 3708 | hbs-RB | 1..877 | 17..893 | 4360 | 99.8 | Plus |
CG33141-PA | 4440 | sns-RA | 304..368 | 221..285 | 150 | 89.2 | Plus |
CG33141-PB | 4629 | sns-RB | 304..368 | 221..285 | 150 | 89.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:54:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hbs-RC | 5478 | CG7449-RC | 396..1272 | 17..893 | 4370 | 99.9 | Plus |
hbs-RB | 4722 | CG7449-RB | 396..1272 | 17..893 | 4370 | 99.9 | Plus |
hbs-RA | 4701 | CG7449-RA | 396..1272 | 17..893 | 4370 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 23:54:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15035980..15036508 | 56..584 | 2645 | 100 | Plus |
2R | 25286936 | 2R | 15036604..15036775 | 584..755 | 860 | 100 | Plus |
2R | 25286936 | 2R | 15036864..15037001 | 756..893 | 675 | 99.3 | Plus |
2R | 25286936 | 2R | 8812821..8813060 | 146..385 | 270 | 74.2 | Plus |
2R | 25286936 | 2R | 15011791..15011830 | 17..56 | 200 | 100 | Plus |
Blast to na_te.dros performed 2015-02-09 23:54:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
accord | 7404 | accord ACCORD 7404bp | 5186..5242 | 21..77 | 114 | 66.7 | Plus |
BO13072.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:54:07 Download gff for
BO13072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hbs-PB | 1..876 | 17..892 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:36:20 Download gff for
BO13072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7449-PB | 1..876 | 17..892 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:30:52 Download gff for
BO13072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hbs-RA | 396..1271 | 17..892 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:59:29 Download gff for
BO13072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hbs-RA | 396..1271 | 17..892 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:59:29 Download gff for
BO13072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15011791..15011830 | 17..56 | 100 | -> | Plus |
2R | 15035981..15036508 | 57..584 | 100 | -> | Plus |
2R | 15036605..15036775 | 585..755 | 100 | -> | Plus |
2R | 15036864..15037000 | 756..892 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:30:52 Download gff for
BO13072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10899296..10899335 | 17..56 | 100 | -> | Plus |
arm_2R | 10923486..10924013 | 57..584 | 100 | -> | Plus |
arm_2R | 10924110..10924280 | 585..755 | 100 | -> | Plus |
arm_2R | 10924369..10924505 | 756..892 | 99 | | Plus |
BO13072.complete Sequence
3718 bp assembled on 2008-11-10
GenBank Submission: KX795970
> BO13072.complete
GAAGTTATCAGTCGACATGCAGTTTTGGATAACTCTGACATTTGCCGTGC
ACTTGGCTACGACCATCTGCCACGTAATGGCCGCAGTTACTGCTCCAACT
CCGGCTGCTCAGGTGGCAGCCCCACCTGTGCAAAAGTTTCACCTGACGCC
CCACGATCTGCAGATACTCGAGGGCACCGACACCCTCCTGCGCTGCGAGG
TATCGAACCGGGCGGGCAAAGTCCAGTGGACCAAGGATGGCTTTGCGCTG
GGATTCTCGGCCGTAATTCCCGGATTCCCACGCTATTCTGTGCTGGTGGA
TGCCAAACAGAATGCCTACAATCTGCAGATCAAGAACGCCACGCTGGAGG
ACGATGCCGAATACCAATGCCAGGTGGGTCCTGCTGCTGGAAATCCCGCC
ATTCGTGCCAATGCCAAGTTGAGCATAGTGGCTGCTCCGAGTAGCATCGT
TATCGAGGGCTATGCCCGGAATGCCCGAGTGGAGGTGGAGGAGCGCCAGA
ATCTTACGCTGCACTGTATCGCCGAGAACGCCAATCCGGCGGCGGAGATT
GTCTGGTTCCAGGGCGAAGTTCCAGTCTCCACGGCCCCCATCGTGACGGT
GAATCAAACTGCCCCGAAGCGATTCACAACTAGCTCCACTTTGCACCTGC
AGCCGCGCGCCGAAGACGATTACAAGGAGTTCTCCTGCGAGGCGCGTCAC
AAGGCTCTGCCCCCCGATGTACCGATGCGCGCCCAGGTGCAGCTCTCCGT
ACTCTATCCGCCCGGCGCTCCGTTCTTTGAGGGCTACAGCCAGGGTGAGA
CCCTGCATCGCGGCCAGGAAGTTCAAATCGCCTGTCGAAGCCGCGGCGGC
AATCCCCCGGCCCAATTGACTTGGTACCGAAATGGCGTGGCCATCAGTTC
CCCACAACGCACCTCGGGCCGTCTGTCGGAGAACGTTTACAAGTTCACCG
CCGCCGCCGAGGACAATGGGGCTAATTTGGTGTGCGAGGCCAAAAATCTG
CTGGCGACAACTCCTCTGCGCGCCGAACTCAATTTGACTGTCCTGTATGC
TCCCAAGGATGTTTATCTGAGCGGCGCCAATCAGGCCAAGGTCGGCGATT
CCGTGCAACTAAGCTGCGTGACAGCGCCTTCGAATCCCCAGGCCCGAATT
AGCTGGTCCATAAATGGCAGACCGCTGGACAATAGCACCTATAAGACGAC
CAGTAGCTCCGACGGTGGCTGGGTCAGTAGTTCCAACATCAGCTTGACTA
TAGATTCGCAGAGCAGGACTTTCATCGCCGTTTGCCACGCCCTCAACACG
GAACTCACTCAGAATGTGGTGGGATCACACACCGTGAATGTGCTTTATCC
CCCTTCGCCACCCTTGTTGACGGGCTATAATGATGGTGATATCCTTATCT
CGGGATCGATTTTGAAACTTCAGTGCAGTTCTGCTGGCGGAAATCCTCCA
CCGACATTGCAGTGGTACAAAAACGATAAGATCATTAATGCTCCCTCCAA
ACTGGTGGACAGTAAAATCACCTCTGAGCTCTCACTTTTGGTAAACGCCT
CCGATAACAATGCCATCTATAAGTGCAAGGTTCAAAATGCAGCTATTGAC
ATACCACTATTTGCCACCAAAACTTTGGGAGTTCATTTTCCTCCCGAAAC
GGTTAAGATCAGTGTCGTGCCCAAGAATCTAGTGCCTGGCATTCGAGCCA
AGCTGATCTGTGACTCCAGCTCTAGTAATCCACCGGCGAAGATAAGCTGG
TGGAAAGATGGCATTCCCGTCGAAGGTCTTAACTTGGCCAATAGGCCCGG
TCTCTGGGGCGGTTCGGTGTCCACGCTTGAGATGTACGTTAACATAACCC
AGGATCTGGATGGCATTGTCTATACCTGTCAGAGTCACAACGAGGTTCTG
CAGCGCAGTGTTCACGAAACAATTAGCTTGGATATACTTTATCCCCCCAA
ATTCGAGACGCCACAGAGCACCACCTTCGTGGGCGTTGAGGGAGCGCCGT
TCCATGTGGAGCTGCTGGCCAGCGGAAACCCCATGGTAATTACCTATACC
TGGACCAAGGACGGCCTGCCCATTAGCAGCAATAGTCTGAGCGGGCAGCG
TTTGATCTCCGACGGACCTCGTCTCAATATCAGTCGTCTGAGTCGCAATG
ATGCGGGTGTCTACATATGCGAGGCGCTCAATAGCCAGGGCACCGCGCTG
CTGGAGATTCAAGTGGCCGTGGAATATGCCCCCACAATTACGGCGGTTAG
CGAGGGTCGCAGTTTTGTGGCCGGCGAACCGGCGGTCTTGGCCTGCCACA
TTCAGGCCCGCCCGCTAGAGGCCGCTCATGTGCGCTGGTCCCGCGACGGT
TATGATCTGGCCACGCGCACCATATCGAGTTTTGAAAATGGAACCGCCCT
GCTGCAGATCGCCAGTGTGGAGCGCAGTGATATTGGCAACTTTACCTGCA
TTGTGGACAACCAAAGAGGAGCTCCCGCCGCGCAAAACGTACTTCTGGTG
GTGCAAACTGCCCCTGAAATTGACCACTCACCCGGTTTCACCCGCTATGC
TGCCCGTTTGGGAGTTCGTGCCCAGCTCATTTGCAGATCTCTGGCCTCGC
CGCAGCCCAGTTTCATCTGGCGTCGTCATGGCAAGGATCTCAAGATGCAA
CGGCGCAACAAATTCAAAAGCGTGGAACGCCAGGTGGATGCCCTGAACTT
TGAGTCGGCTCTGCTAATCGAAAACACTTCGCCCGATGATTATGGTCAGT
ACGAGTGTGTGGTGCGAAATTCGCTGGGACAGGCGAGTACCACCCTGGAG
TTTAGCAAACCCTCTCGCCCGGATGCTCCGCTGCAGCTGAGGGTGGGCAA
TGTGAGTGATACGGGTGTGGATCTGAACTGGACTCCCGGCTTCGATGGTG
GCATGCAGACATATTTCCGTCTGCGGCTCAAACAGCACGGCGAGGATAAG
TACAAGTACGTGGACGCCAAGCCCGGACATCAGAATATATCCCTTGATGG
CCTGAAGCCAGGAGCAACCTACTACTTCTCCGTGATGGCCGCCAATGAAG
CGGGAGGCAGTAAATTCATGCCCGATATCAAGTTGACCCTCAGCAAGGGA
TCGCAGCCCCATTCGGCGGAGTACACCGAAAAAGACGAACTGCCCAATGT
GATGATCATTGGAATCACCTCAGCAGCCATGGTTTTGTTGGTTCTGAACG
CTGCCCTGGTAGCCTGGTTCGTGATCCGCCGGCAGAACAAATCTCAGAGC
GAAGCGGAGCCGAGCAACGATGATGTGTACTCCAAGGATGACAGTCAGTC
TGTCTACAAGGCGGATGTTCAGAAGAAAGCAGCCGCCTCCACATATCTCG
TGGAGAACGTGGACATTATCCAGTCGACGGCGTATCCGCCGAAATATCAG
GAGAGCTCCATGTGCACCCCGCCCTATCCGCTCTGCAATCCGGACTTCAC
CCGGACCCTGCCGAATCCCAAGCGGCACAGTCAGCGGAACAGTGCCACGG
GCATGATCGAGGGCATGCAGATGCGCTCCAAGGACGATCATATGCTGATC
TCCAACGGACTGTACATACCATCACCGTCGCCGGCCTCCTCCCTGGTGAT
CAAGGGTAGCTACATATCCTCACCATCGCCAGCGCCGCCAGCAGATGGAT
CATACTTTAATATGAGCGACAAATATATGTCCTATCCGCCGGTGACTTAC
GCAAGCTTTCTAGACCAT
BO13072.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:50:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hbs-RA | 3687 | CG7449-PA | 1..3684 | 17..3700 | 18405 | 100 | Plus |
hbs-RC | 3708 | CG7449-PC | 1..3705 | 17..3700 | 18160 | 99.4 | Plus |
hbs-RB | 3708 | CG7449-PB | 1..3705 | 17..3700 | 18160 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:50:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hbs-RA | 4701 | CG7449-RA | 396..4079 | 17..3700 | 18405 | 100 | Plus |
hbs-RC | 5478 | CG7449-RC | 396..4100 | 17..3700 | 18160 | 99.4 | Plus |
hbs-RB | 4722 | CG7449-RB | 396..4100 | 17..3700 | 18160 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:50:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15039248..15040051 | 2508..3311 | 4005 | 99.9 | Plus |
2R | 25286936 | 2R | 15035980..15036508 | 56..584 | 2645 | 100 | Plus |
2R | 25286936 | 2R | 15040136..15040521 | 3309..3694 | 1930 | 100 | Plus |
2R | 25286936 | 2R | 15038133..15038435 | 1638..1940 | 1515 | 100 | Plus |
2R | 25286936 | 2R | 15037357..15037656 | 1047..1346 | 1500 | 100 | Plus |
2R | 25286936 | 2R | 15037783..15038073 | 1347..1637 | 1455 | 100 | Plus |
2R | 25286936 | 2R | 15036864..15037154 | 756..1046 | 1455 | 100 | Plus |
2R | 25286936 | 2R | 15038509..15038793 | 1941..2225 | 1425 | 100 | Plus |
2R | 25286936 | 2R | 15038870..15039151 | 2226..2507 | 1410 | 100 | Plus |
2R | 25286936 | 2R | 15036604..15036775 | 584..755 | 860 | 100 | Plus |
2R | 25286936 | 2R | 8812821..8813060 | 146..385 | 270 | 74.2 | Plus |
2R | 25286936 | 2R | 15011791..15011830 | 17..56 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:50:52 has no hits.
BO13072.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:16:28 Download gff for
BO13072.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hbs-RA | 394..4082 | 17..3706 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:32:41 Download gff for
BO13072.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hbs-RA | 396..4079 | 17..3702 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:10:40 Download gff for
BO13072.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hbs-RA | 394..4077 | 17..3702 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:39:04 Download gff for
BO13072.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hbs-RA | 396..4079 | 17..3702 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:39:04 Download gff for
BO13072.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15011791..15011830 | 17..56 | 100 | -> | Plus |
2R | 15035981..15036508 | 57..584 | 100 | -> | Plus |
2R | 15036605..15036775 | 585..755 | 100 | -> | Plus |
2R | 15036864..15037154 | 756..1046 | 100 | -> | Plus |
2R | 15037357..15037656 | 1047..1346 | 100 | -> | Plus |
2R | 15037783..15038073 | 1347..1637 | 100 | -> | Plus |
2R | 15038133..15038435 | 1638..1940 | 100 | -> | Plus |
2R | 15038509..15038793 | 1941..2225 | 100 | -> | Plus |
2R | 15038870..15039151 | 2226..2507 | 100 | -> | Plus |
2R | 15039248..15040050 | 2508..3310 | 99 | -> | Plus |
2R | 15040138..15040521 | 3311..3694 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:32:41 Download gff for
BO13072.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10899296..10899335 | 17..56 | 100 | -> | Plus |
arm_2R | 10923486..10924013 | 57..584 | 100 | -> | Plus |
arm_2R | 10924110..10924280 | 585..755 | 100 | -> | Plus |
arm_2R | 10924369..10924659 | 756..1046 | 100 | -> | Plus |
arm_2R | 10924862..10925161 | 1047..1346 | 100 | -> | Plus |
arm_2R | 10925288..10925578 | 1347..1637 | 100 | -> | Plus |
arm_2R | 10925638..10925940 | 1638..1940 | 100 | -> | Plus |
arm_2R | 10926014..10926298 | 1941..2225 | 100 | -> | Plus |
arm_2R | 10926375..10926656 | 2226..2507 | 100 | -> | Plus |
arm_2R | 10926753..10927555 | 2508..3310 | 99 | -> | Plus |
arm_2R | 10927643..10928026 | 3311..3694 | 100 | | Plus |
BO13072.pep Sequence
Translation from 16 to 3718
> BO13072.pep
MQFWITLTFAVHLATTICHVMAAVTAPTPAAQVAAPPVQKFHLTPHDLQI
LEGTDTLLRCEVSNRAGKVQWTKDGFALGFSAVIPGFPRYSVLVDAKQNA
YNLQIKNATLEDDAEYQCQVGPAAGNPAIRANAKLSIVAAPSSIVIEGYA
RNARVEVEERQNLTLHCIAENANPAAEIVWFQGEVPVSTAPIVTVNQTAP
KRFTTSSTLHLQPRAEDDYKEFSCEARHKALPPDVPMRAQVQLSVLYPPG
APFFEGYSQGETLHRGQEVQIACRSRGGNPPAQLTWYRNGVAISSPQRTS
GRLSENVYKFTAAAEDNGANLVCEAKNLLATTPLRAELNLTVLYAPKDVY
LSGANQAKVGDSVQLSCVTAPSNPQARISWSINGRPLDNSTYKTTSSSDG
GWVSSSNISLTIDSQSRTFIAVCHALNTELTQNVVGSHTVNVLYPPSPPL
LTGYNDGDILISGSILKLQCSSAGGNPPPTLQWYKNDKIINAPSKLVDSK
ITSELSLLVNASDNNAIYKCKVQNAAIDIPLFATKTLGVHFPPETVKISV
VPKNLVPGIRAKLICDSSSSNPPAKISWWKDGIPVEGLNLANRPGLWGGS
VSTLEMYVNITQDLDGIVYTCQSHNEVLQRSVHETISLDILYPPKFETPQ
STTFVGVEGAPFHVELLASGNPMVITYTWTKDGLPISSNSLSGQRLISDG
PRLNISRLSRNDAGVYICEALNSQGTALLEIQVAVEYAPTITAVSEGRSF
VAGEPAVLACHIQARPLEAAHVRWSRDGYDLATRTISSFENGTALLQIAS
VERSDIGNFTCIVDNQRGAPAAQNVLLVVQTAPEIDHSPGFTRYAARLGV
RAQLICRSLASPQPSFIWRRHGKDLKMQRRNKFKSVERQVDALNFESALL
IENTSPDDYGQYECVVRNSLGQASTTLEFSKPSRPDAPLQLRVGNVSDTG
VDLNWTPGFDGGMQTYFRLRLKQHGEDKYKYVDAKPGHQNISLDGLKPGA
TYYFSVMAANEAGGSKFMPDIKLTLSKGSQPHSAEYTEKDELPNVMIIGI
TSAAMVLLVLNAALVAWFVIRRQNKSQSEAEPSNDDVYSKDDSQSVYKAD
VQKKAAASTYLVENVDIIQSTAYPPKYQESSMCTPPYPLCNPDFTRTLPN
PKRHSQRNSATGMIEGMQMRSKDDHMLISNGLYIPSPSPASSLVIKGSYI
SSPSPAPPADGSYFNMSDKYMSYPPVTYASFLDH
BO13072.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:09:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hbs-PA | 1228 | CG7449-PA | 1..1228 | 1..1228 | 6388 | 100 | Plus |
hbs-PC | 1235 | CG7449-PC | 1..1235 | 1..1228 | 6370 | 99.4 | Plus |
hbs-PB | 1235 | CG7449-PB | 1..1235 | 1..1228 | 6370 | 99.4 | Plus |
sns-PA | 1479 | CG33141-PA | 43..1266 | 2..1233 | 3209 | 50 | Plus |
sns-PC | 1492 | CG33141-PC | 43..1279 | 2..1233 | 3124 | 48.4 | Plus |