Clone BO13091 Report

Search the DGRC for BO13091

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:130
Well:91
Vector:pDNR-Dual
Associated Gene/Transcriptaret-RD
Protein status:BO13091.pep: full length peptide match
Sequenced Size:1117

Clone Sequence Records

BO13091.3prime Sequence

700 bp (695 high quality bases) assembled on 2006-05-08

> BO13091.3prime
ATGGTCTAGAAAGCTTGCGTAGGGCTTCGAGTCCTTGGGCTTCTTCAGCT
GCACCTTGAGACGCTTGGTGCCCACCTGGAAGCCGTTCATCGCCTTTATG
GCCACCTGGGCCGAGTCCGGATTGTCGAAGGAGACAAACCCGAAGCACTT
CGACAGGCTCGTCTGTTTGTCGATGAACACCTTGGCCGAGATCACATTGC
CGAAGGGCAGGAACGTGGAGGCCAGATCCGTATCGGTGAACTCCTGCGGC
AGATGGTAGATGAAAAGGTTGCAGCCCTCGGGTCCTTCAATCTGCTTTCC
CGCTGCGGCGGCGGCTGCGGCGCTGAGGGCAACGCTGGCCAGCGGCGAAG
TGGACAATGCACTGGCGCTCCCGAATTGCGGCAGACCGGCGGCTGTTGAC
ATATATGCCGATGCCATTGGATTCGGATCGGACCAGAGCAGCGCAGCCGT
GTTGGTCAGTTGGGCGCTTCCAGGCGATGTGGCAGCGGCGGCTGCCGCGG
CGGCATTCGAGAGACTCGGCTGCGTCATGGCCGCAATGGCCGCTAAGATT
CTGGACGGTCATCGGGGTCAAAAGTCCTGCGGCCGCCACAACGCTGGTGT
CCGTCGCCGAGCTGCTCTGCTGGGCTCCCAGTCCTGTGAGGGCTTGCAAC
AACTGGTGCTGCAGTCCCACCGCCTGCAGCTGCTGCCAGCAGTTGATTGG

BO13091.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:57:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG31762-PB 2433 aret-RB 1904..2430 545..19 2635 100 Minus
CG31762-PA 1815 aret-RA 1286..1812 545..19 2635 100 Minus
CG31762-PD 1086 aret-RD 557..1083 545..19 2635 100 Minus
CG31762-PC 1851 aret-RC 1433..1848 434..19 2080 100 Minus
CG31762-PC 1851 aret-RC 1146..1286 686..546 680 99.2 Minus
CG31762-PB 2433 aret-RB 1764..1904 686..546 680 99.2 Minus
CG31762-PA 1815 aret-RA 1146..1286 686..546 680 99.2 Minus
CG31762-PD 1086 aret-RD 417..557 686..546 680 99.2 Minus
CG31762-PC 1851 aret-RC 1286..1397 545..434 560 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:04:18
Subject Length Description Subject Range Query Range Score Percent Strand
aret-RK 3510 CG31762-RK 1467..2146 700..19 3330 99.4 Minus
aret-RJ 2431 CG31762-RJ 1496..2175 700..19 3330 99.4 Minus
aret-RI 3019 CG31762-RI 1191..1870 700..19 3330 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 12:04:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12310680..12310947 286..19 1340 100 Minus
2L 23513712 2L 12299186..12299395 644..434 990 99.1 Minus
2L 23513712 2L 12304446..12304596 434..284 755 100 Minus
2L 23513712 2L 12396291..12396524 286..53 450 79.5 Minus
2L 23513712 2L 12299055..12299111 700..643 225 96.6 Minus
Blast to na_te.dros performed on 2015-01-31 12:04:14 has no hits.

BO13091.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:54:39 Download gff for BO13091.3prime
Subject Subject Range Query Range Percent Splice Strand
aret-PA 1133..1815 18..700 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:37:06 Download gff for BO13091.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31762-PA 1133..1815 18..700 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:55:32 Download gff for BO13091.3prime
Subject Subject Range Query Range Percent Splice Strand
aret-RI 1191..1870 19..700 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 13:01:08 Download gff for BO13091.3prime
Subject Subject Range Query Range Percent Splice Strand
aret-RI 1191..1870 19..700 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 13:01:08 Download gff for BO13091.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 12299055..12299111 643..700 96 -> Minus
2L 12299188..12299394 435..642 99 -> Minus
2L 12304446..12304595 285..434 100 -> Minus
2L 12310682..12310947 19..284 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:55:32 Download gff for BO13091.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12299055..12299111 643..700 96 -> Minus
arm_2L 12299188..12299394 435..642 99 -> Minus
arm_2L 12304446..12304595 285..434 100 -> Minus
arm_2L 12310682..12310947 19..284 100   Minus

BO13091.5prime Sequence

663 bp (646 high quality bases) assembled on 2006-05-08

> BO13091.5prime
GAAGTTATCAGTCGACATGCTAAACAAGAAGCTGAACGAGAACGACGTTC
GCAAGCTATTTGAAGTCCACGGAGCCATCGAGGAGTGCACCGTCCTTCGG
GACCAAAACGGACAGAGCAAGGGTTGTGCCTTCGTCACATTCGCCACCAA
GCACGCTGCCATTTCGGCCATTAAAGTGACCCTGAGCCAGAACAAGATCA
TGGAGGGCTGCACATCGCCGCTGGTCGTCAAGTTCGCCGATACGCAAAAA
GAGAAGGAGCAGAAGAAGATTCAGCAAATTCAGGCCAATCTCTGGAACCT
GGCCAGCAACATCAACATACCTCTGGGCCAAACGGCCACCAGCGTGACCA
CGCCCATCCTGCCCAATCCGCCGCAGCAGCCTTCGCCGGTTCTCGGCGCA
GATGCCATTACCCCGGCCTCCATTCAACTGCTGCAGCAGCTGCAGGCGGT
GGGACTGCAGCACCAGTTGTTGCAAGCCCTCACAGGACTGGGAGCCCAGC
AGAGCAGCTCGGCGACGGACACCAGCGCTGTGGCGGCCGCAGGACTTTTG
ACCCCGATGACCGTCCAGAATCTAGCGGCCATTGCGGCCATGACGCAGCC
GAGTCTCTCGAATGCCGCCGCGGCAGCCGCCGCTGCCACATCGCCTGGAA
GCGCCCAACTGAC

BO13091.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:57:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG31762-PB 2433 aret-RB 1348..1994 17..663 3235 100 Plus
CG31762-PA 1815 aret-RA 730..1376 17..663 3235 100 Plus
CG31762-PC 1851 aret-RC 730..1376 17..663 3235 100 Plus
CG31762-PD 1086 aret-RD 1..647 17..663 3235 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:01:01
Subject Length Description Subject Range Query Range Score Percent Strand
aret-RK 3510 CG31762-RK 1064..1710 17..663 3235 100 Plus
aret-RJ 2431 CG31762-RJ 1093..1739 17..663 3235 100 Plus
aret-RI 3019 CG31762-RI 788..1434 17..663 3235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:00:55
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12298813..12299111 178..476 1495 100 Plus
2L 23513712 2L 12299186..12299374 475..663 945 100 Plus
2L 23513712 2L 12298588..12298749 17..178 810 100 Plus
2L 23513712 2L 12385632..12385718 67..153 240 85.1 Plus
Blast to na_te.dros performed on 2015-02-13 08:00:59 has no hits.

BO13091.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:54:40 Download gff for BO13091.5prime
Subject Subject Range Query Range Percent Splice Strand
aret-PB 1342..1994 11..663 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:37:08 Download gff for BO13091.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31762-PD 1..647 17..663 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:37:58 Download gff for BO13091.5prime
Subject Subject Range Query Range Percent Splice Strand
aret-RI 782..1434 11..663 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:02:53 Download gff for BO13091.5prime
Subject Subject Range Query Range Percent Splice Strand
aret-RI 782..1434 11..663 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:02:53 Download gff for BO13091.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 12298582..12298749 11..178 98 -> Plus
2L 12298814..12299111 179..476 100 -> Plus
2L 12299188..12299374 477..663 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:37:58 Download gff for BO13091.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12298582..12298749 11..178 98 -> Plus
arm_2L 12298814..12299111 179..476 100 -> Plus
arm_2L 12299188..12299374 477..663 100   Plus

BO13091.complete Sequence

1117 bp assembled on 2006-10-11

GenBank Submission: FJ632672

> BO13091.complete
GAAGTTATCAGTCGACATGCTAAACAAGAAGCTGAACGAGAACGACGTTC
GCAAGCTATTTGAAGTCCACGGAGCCATCGAGGAGTGCACCGTCCTTCGG
GACCAAAACGGACAGAGCAAGGGTTGTGCCTTCGTCACATTCGCCACCAA
GCACGCTGCCATTTCGGCCATTAAAGTGACCCTGAGCCAGAACAAGATCA
TGGAGGGCTGCACATCGCCGCTGGTCGTCAAGTTCGCCGATACGCAAAAA
GAGAAGGAGCAGAAGAAGATTCAGCAAATTCAGGCCAATCTCTGGAACCT
GGCCAGCAACATCAACATACCTCTGGGCCAAACGGCCACCAGCGTGACCA
CGCCCATCCTGCCCAATCCGCCGCAGCAGCCTTCGCCGGTTCTCGGCGCA
GATGCCATTACCCCGGCCTCCATTCAACTGCTGCAGCAGCTGCAGGCGGT
GGGACTGCAGCACCAGTTGTTGCAAGCCCTCACAGGACTGGGAGCCCAGC
AGAGCAGCTCGGCGACGGACACCAGCGCTGTGGCGGCCGCAGGACTTTTG
ACCCCGATGACCGTCCAGAATCTAGCGGCCATTGCGGCCATGACGCAGCC
GAGTCTCTCGAATGCCGCCGCGGCAGCCGCCGCTGCCACATCGCCTGGAA
GCGCCCAACTGACCAACACGGCTGCGCTGCTCTGGTCCGATCCGAATCCA
ATGGCATCGGCATATATGTCAACAGCCGCCGGTCTGCCGCAATTCGGGAG
CGCCAGTGCATTGTCCACTTCGCCGCTGGCCAGCGTTGCCCTCAGCGCCG
CAGCCGCCGCCGCAGCGGGAAAGCAGATTGAAGGACCCGAGGGCTGCAAC
CTTTTCATCTACCATCTGCCGCAGGAGTTCACCGATACGGATCTGGCCTC
CACGTTCCTGCCCTTCGGCAATGTGATCTCGGCCAAGGTGTTCATCGACA
AACAGACGAGCCTGTCGAAGTGCTTCGGGTTTGTCTCCTTCGACAATCCG
GACTCGGCCCAGGTGGCCATAAAGGCGATGAACGGCTTCCAGGTGGGCAC
CAAGCGTCTCAAGGTGCAGCTGAAGAAGCCCAAGGACTCGAAGCCCTACG
CAAGCTTTCTAGACCAT

BO13091.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:59:55
Subject Length Description Subject Range Query Range Score Percent Strand
aret-RK 1722 CG31762-PK 637..1719 17..1099 5415 100 Plus
aret-RJ 1722 CG31762-PJ 637..1719 17..1099 5415 100 Plus
aret-RI 1722 CG31762-PI 637..1719 17..1099 5415 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:59:56
Subject Length Description Subject Range Query Range Score Percent Strand
aret-RK 3510 CG31762-RK 1064..2146 17..1099 5415 100 Plus
aret-RJ 2431 CG31762-RJ 1093..2175 17..1099 5415 100 Plus
aret-RI 3019 CG31762-RI 788..1870 17..1099 5415 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:59:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12298813..12299111 178..476 1495 100 Plus
2L 23513712 2L 12310680..12310947 832..1099 1340 100 Plus
2L 23513712 2L 12299186..12299395 475..684 1050 100 Plus
2L 23513712 2L 12298588..12298749 17..178 810 100 Plus
2L 23513712 2L 12304446..12304596 684..834 755 100 Plus
2L 23513712 2L 12396291..12396524 832..1065 450 79.5 Plus
2L 23513712 2L 12385632..12385718 67..153 240 85.1 Plus
Blast to na_te.dros performed on 2014-11-28 07:59:54 has no hits.

BO13091.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:35:58 Download gff for BO13091.complete
Subject Subject Range Query Range Percent Splice Strand
aret-RA 724..1815 11..1100 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:47:29 Download gff for BO13091.complete
Subject Subject Range Query Range Percent Splice Strand
aret-RA 1059..2141 17..1101 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:21 Download gff for BO13091.complete
Subject Subject Range Query Range Percent Splice Strand
aret-RI 788..1870 17..1101 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:35:58 Download gff for BO13091.complete
Subject Subject Range Query Range Percent Splice Strand
aret-RA 1053..2141 11..1099 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:08:43 Download gff for BO13091.complete
Subject Subject Range Query Range Percent Splice Strand
aret-RI 788..1870 17..1101 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:08:43 Download gff for BO13091.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12298588..12298749 17..178 100 -> Plus
2L 12298814..12299111 179..476 100 -> Plus
2L 12299188..12299394 477..683 100 -> Plus
2L 12304446..12304595 684..833 100 -> Plus
2L 12310682..12310947 834..1101 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:21 Download gff for BO13091.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12304446..12304595 684..833 100 -> Plus
arm_2L 12298588..12298749 17..178 100 -> Plus
arm_2L 12298814..12299111 179..476 100 -> Plus
arm_2L 12299188..12299394 477..683 100 -> Plus
arm_2L 12310682..12310947 834..1101 99   Plus

BO13091.pep Sequence

Translation from 16 to 1117

> BO13091.pep
MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAIS
AIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNLASNIN
IPLGQTATSVTTPILPNPPQQPSPVLGADAITPASIQLLQQLQAVGLQHQ
LLQALTGLGAQQSSSATDTSAVAAAGLLTPMTVQNLAAIAAMTQPSLSNA
AAAAAAATSPGSAQLTNTAALLWSDPNPMASAYMSTAAGLPQFGSASALS
TSPLASVALSAAAAAAAGKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPF
GNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKAMNGFQVGTKRLKV
QLKKPKDSKPYASFLDH

BO13091.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:18:15
Subject Length Description Subject Range Query Range Score Percent Strand
aret-PD 361 CG31762-PD 1..361 1..361 1802 100 Plus
aret-PK 573 CG31762-PK 213..573 1..361 1802 100 Plus
aret-PJ 573 CG31762-PJ 213..573 1..361 1802 100 Plus
aret-PI 573 CG31762-PI 213..573 1..361 1802 100 Plus
aret-PH 573 CG31762-PH 213..573 1..361 1802 100 Plus