Clone Sequence Records
BO13095.3prime Sequence
480 bp (479 high quality bases) assembled on 2006-05-08
> BO13095.3prime
ATGGTCTAGAAAGCTTGCATGCCTGAGCATGCTGGCCAGTGCCAGACTGA
CGACAGATCCAACCAGACTGTAGCCCAACTGGCGGACACCCAGCAGGGAG
CTGGCTCCATTGCATCCCTCGTCGGGACAGGTGCAAATGATCTGCTTGTA
GCCCTCGTTGTCGGCGGTGAAGCAAGCGTTTTGGATCTTCTCCGGAATGA
AACCACAGCTTCTCTCGATTCTGCGCTCGTCGTTCTGCTCGAAATTGATC
ACCGTCTTGCGGCAGAAGGCCACCTCACCGCTGGGCGGGACGCAGTCCGT
CAGGTACTGGTTGTCCCTCTGGGCACGAGGAGTGTTCACCACCAGGCCAC
CGCAATCCTCGTTGTCATGCGAATTACACTGATGGCACCGAATGGCATTC
ACTGTTAACAAATTGGCGGCCAAAACAAGGCACATGGCATAGACGTAGGT
TTGTGATTGCCATGTCGACTGATAACTTCG
BO13095.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:58:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14275-PA | 447 | CG14275-RA | 12..444 | 451..19 | 2165 | 100 | Minus |
CG14275-PB | 447 | CG14275-RB | 12..444 | 451..19 | 2165 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:36:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14275-RB | 848 | CG14275-RB | 184..627 | 463..19 | 2200 | 99.8 | Minus |
CG14275-RA | 849 | CG14275-RA | 185..628 | 463..19 | 2200 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:36:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8332305..8332690 | 404..19 | 1930 | 100 | Minus |
2L | 23513712 | 2L | 8329704..8329764 | 463..402 | 260 | 98.4 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:36:14 has no hits.
BO13095.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:54:47 Download gff for
BO13095.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14275-PB | 1..447 | 18..463 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:37:15 Download gff for
BO13095.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14275-PB | 1..447 | 18..463 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:41:10 Download gff for
BO13095.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14275-RA | 179..628 | 19..471 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:40:35 Download gff for
BO13095.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14275-RA | 179..628 | 19..471 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:40:35 Download gff for
BO13095.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8329698..8329764 | 402..471 | 92 | -> | Minus |
2L | 8332308..8332690 | 19..401 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:41:10 Download gff for
BO13095.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8329698..8329764 | 402..471 | 92 | -> | Minus |
arm_2L | 8332308..8332690 | 19..401 | 100 | | Minus |
BO13095.5prime Sequence
476 bp (475 high quality bases) assembled on 2006-05-08
> BO13095.5prime
GAAGTTATCAGTCGACATGGCAATCACAACCTACGTCTATGCCATGTGCC
TTGTTTTGGCCGCCAATTTGTTAACAGTGAATGCCATTCGGTGCCATCAG
TGTAATTCGCATGACAACGAGGATTGCGGTGGCCTGGTGGTGAACACTCC
TCGTGCCCAGAGGGACAACCAGTACCTGACGGACTGCGTCCCGCCCAGCG
GTGAGGTGGCCTTCTGCCGCAAGACGGTGATCAATTTCGAGCAGAACGAC
GAGCGCAGAATCGAGAGAAGCTGTGGTTTCATTCCGGAGAAGATCCAAAA
CGCTTGCTTCACCGCCGACAACGAGGGCTACAAGCAGATCATTTGCACCT
GTCCCGACGAGGGATGCAATGGAGCCAGCTCCCTGCTGGGTGTCCGCCAG
TTGGGCTACAGTCTGGTTGGATCTGTCGTCAGTCTGGCACTGGCCAGCAT
GCTCAGGCATGCAAGCTTTCTAGACC
BO13095.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:58:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14275-PA | 447 | CG14275-RA | 1..444 | 17..460 | 2220 | 100 | Plus |
CG14275-PB | 447 | CG14275-RB | 1..444 | 17..460 | 2220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:31:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14275-RB | 848 | CG14275-RB | 184..627 | 17..460 | 2220 | 100 | Plus |
CG14275-RA | 849 | CG14275-RA | 185..628 | 17..460 | 2220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:31:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8332305..8332690 | 75..460 | 1930 | 100 | Plus |
2L | 23513712 | 2L | 8329704..8329764 | 17..77 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:31:48 has no hits.
BO13095.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:54:48 Download gff for
BO13095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14275-PB | 1..447 | 17..461 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:37:17 Download gff for
BO13095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14275-PB | 1..447 | 17..461 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:58:52 Download gff for
BO13095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14275-RA | 179..628 | 9..460 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:57:35 Download gff for
BO13095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14275-RA | 179..628 | 9..460 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:57:35 Download gff for
BO13095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8329698..8329764 | 9..77 | 94 | -> | Plus |
2L | 8332308..8332690 | 78..460 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:58:52 Download gff for
BO13095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8329698..8329764 | 9..77 | 94 | -> | Plus |
arm_2L | 8332308..8332690 | 78..460 | 100 | | Plus |
BO13095.complete Sequence
478 bp assembled on 2006-10-11
GenBank Submission: FJ632675
> BO13095.complete
GAAGTTATCAGTCGACATGGCAATCACAACCTACGTCTATGCCATGTGCC
TTGTTTTGGCCGCCAATTTGTTAACAGTGAATGCCATTCGGTGCCATCAG
TGTAATTCGCATGACAACGAGGATTGCGGTGGCCTGGTGGTGAACACTCC
TCGTGCCCAGAGGGACAACCAGTACCTGACGGACTGCGTCCCGCCCAGCG
GTGAGGTGGCCTTCTGCCGCAAGACGGTGATCAATTTCGAGCAGAACGAC
GAGCGCAGAATCGAGAGAAGCTGTGGTTTCATTCCGGAGAAGATCCAAAA
CGCTTGCTTCACCGCCGACAACGAGGGCTACAAGCAGATCATTTGCACCT
GTCCCGACGAGGGATGCAATGGAGCCAGCTCCCTGCTGGGTGTCCGCCAG
TTGGGCTACAGTCTGGTTGGATCTGTCGTCAGTCTGGCACTGGCCAGCAT
GCTCAGGCATGCAAGCTTTCTAGACCAT
BO13095.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:32:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14275-RB | 447 | CG14275-PB | 1..444 | 17..460 | 2220 | 100 | Plus |
CG14275-RA | 447 | CG14275-PA | 1..444 | 17..460 | 2220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:32:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14275-RB | 848 | CG14275-RB | 184..627 | 17..460 | 2220 | 100 | Plus |
CG14275-RA | 849 | CG14275-RA | 185..628 | 17..460 | 2220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:32:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8332305..8332690 | 75..460 | 1930 | 100 | Plus |
2L | 23513712 | 2L | 8329704..8329764 | 17..77 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:32:34 has no hits.
BO13095.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:36:01 Download gff for
BO13095.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14275-RB | 1..447 | 17..461 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:57:04 Download gff for
BO13095.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14275-RA | 177..626 | 9..460 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:58 Download gff for
BO13095.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14275-RA | 185..628 | 17..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:36:01 Download gff for
BO13095.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14275-RA | 177..626 | 9..460 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:13:59 Download gff for
BO13095.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14275-RA | 185..628 | 17..462 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:13:59 Download gff for
BO13095.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8329704..8329764 | 17..77 | 100 | -> | Plus |
2L | 8332308..8332690 | 78..462 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:58 Download gff for
BO13095.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8329704..8329764 | 17..77 | 100 | -> | Plus |
arm_2L | 8332308..8332690 | 78..462 | 99 | | Plus |
BO13095.pep Sequence
Translation from 16 to 478
> BO13095.pep
MAITTYVYAMCLVLAANLLTVNAIRCHQCNSHDNEDCGGLVVNTPRAQRD
NQYLTDCVPPSGEVAFCRKTVINFEQNDERRIERSCGFIPEKIQNACFTA
DNEGYKQIICTCPDEGCNGASSLLGVRQLGYSLVGSVVSLALASMLRHAS
FLDH
BO13095.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:15:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14275-PB | 148 | CG14275-PB | 1..148 | 1..148 | 791 | 100 | Plus |
CG14275-PA | 148 | CG14275-PA | 1..148 | 1..148 | 791 | 100 | Plus |
CG7781-PB | 147 | CG7781-PB | 3..141 | 6..144 | 147 | 29.5 | Plus |
CG7781-PA | 147 | CG7781-PA | 3..141 | 6..144 | 147 | 29.5 | Plus |