Clone Sequence Records
BO13102.complete Sequence
2185 bp assembled on 2010-04-13
GenBank Submission: KX794541
> BO13102.complete
GAAGTTATCAGTCGACATGGGTCTACTGAGCGAGGGCAGTCCACTCTCCT
GGGAGGAGACCAAGGCGCTGGCTGATCATGTGCGTGAGCATGGCGTCAAT
CAGTTCATCAACTTGTACCACAGACTCAAGGATCGCCAGGGTGACATATT
GAAATGGGGCGACGAGGTGGAGTACATTATTGTCAAGTTCGACGATGAAC
AGAAGGTGGCACGTGTGGCGCTGCGCGCCCAGGATCTGCTGGCACAGCTC
AATGAGAAGGAACTGGCCGATCCCAATGGTGTCAAGTCGCTGTGGCGTCC
GGAATACGGAGCCTACATGATTGAGGGCACACCGGGCAAACCCTTTGGCG
GTCTGATGGCACACTTCAATCTGGTTGAGGCCAATATGCGCTATCGTCGC
GAAGAGGTCACCGAGCTGCTGGCCAAGGACGAGTGCGTTATGTCCATTAC
GAATTTCCCACGACTCGGCGCACCAAATTTCACTTATCCGCTTGCCCAGC
CGCGTCCCGAGGATCCTCTCAGTTCAGCCCGCTCGCTCTACTTCCCGGAT
GAGGCCATCTTTCCGGGTCACCCGCGTTTCAAGACACTCACGCGTAACAT
TCGCAAGCGACGCGGCGAGAAGGTGTCCATCAAGCTAAAAGTTTTCAAGG
ACACAAAGACGAAGCTACCGGTGGAGGGTGCTCCGCCTGGCGAACCGGAT
GTGGTGCTCCTGGACGCCATGGGCTTCGGCATGGGCTGCTGTTGCTTGCA
GCTCACCTTCCAGGCCTGTAACATTACGGAGGCGCGTCGCCTCTACGATC
AGCTGGCTCCCCTCTGTCCGATCATGTTGGCTCTGACGGCCGCTTCGCCC
ATTTACAGGGGCTATCTAACCGAATCAGATTGTCGATGGAATGTGATTAG
CTCCTCGGTGGATTGCCGCACGGAAGAGGAACGCGGACTGGCGCCGCTGG
ATCAGCAAAAGTTCAGGATAGCCAAGTCGCGATACGATTCGATTGACTCG
TATTTGTCGCCCGAGGGAGCCAAATATAACGATGTACCGCTCACATACGA
TGAGAAGGTCTATCAGCGTCTGGTGGAGGGCGGTATCGATCATCTGTTGG
CCCAGCATGTTGCCCATTTGTTTATACGCGACACCGTGTCGCTGTTCAGC
GAGAAGGTGCATCAAAACGACAACGAGGATACGGATCATTTCGAGAACAT
TCAGTCCACCAATTGGCAGACCATGCGCTTCAAGCCGCCGCCACCGAACA
GCTCCATTGGCTGGCGTGTCGAGTTTCGACCTTGCGAGGCGCAGATCAGT
GATTTCGAGAATGCGGCCATCGTGTGCTTTGTGGTGCTGCTCACCCGTGT
GATTCTCTCCTACCAGCTGAACTTCCTAACGCCGATCAGCAAGGTGGACG
AGAACATGCAGACGGCCCAGAAGCGAGATGCTTGTCGCAAGGAGAAGTTT
TGGTTCCGCAAATCCTCGAAGACCACCGAGCAGAGGGCGGCCAAGGCGCA
GGCACAAGCTCAAGCGCAAGCTAAAGCCCAGGCCCAGACGAATGGCAAGG
CCACTTTGAATGGCAATGGACTGGCGAATGGAAATGGGAATGGCAGCGAG
AACAGTGACCAGGAAGAGCAGCAGCCTCTGACCAACGGTTCGGCCAAGAT
GAATGGCCACGGAAGTGGCACCACTAACGGCACTAATGGCTCCTCCAATG
GATCATCGAATGGCACCGATAGCGATCACACCGACACCGATGACGAGGAG
AATGAGCTGTTCCAGCTGCTGTCCATCAATGAGATCTTCAATGGAAAGCC
CAACGTTTTTCCGGGTCTGGTGCCATTGATCCGCAGCTATTTGCAGTCCA
TGGAGGTGGACACCGATACGCATTGCACCATTGAACAGTATCTTCGCTTT
ATCCAGAAGCGTGCCGCCGGCGAGCTAATCACCACGGCCACCTGGATGCG
CGAACAGGTGCTTAGCCACCCGGATTACAAGCAGGATTCCGTGGTGAGCG
AGCGCATCAACTACGATTTGCTGAAGCGCATCCAAGGCATCCAGGAGGGC
AAGCAGGTGGAGCCAGCGCTGCTCGGACAAGACTATCATTCCAAGACGAA
GACGAAAGACTTCATTCCGCCGGCCTTGCAGAAGCAGTTAGCCAAGAACG
GCTGCTGCGAGGAGAAAGCAAGCTTTCTAGACCAT
BO13102.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:30:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gclc-RD | 2154 | CG2259-PD | 1..2151 | 17..2167 | 10740 | 100 | Plus |
| Gclc-RC | 2154 | CG2259-PC | 1..2151 | 17..2167 | 10740 | 100 | Plus |
| Gclc-RB | 2154 | CG2259-PB | 1..2151 | 17..2167 | 10740 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:30:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gclc-RD | 3231 | CG2259-RD | 128..2278 | 17..2167 | 10740 | 100 | Plus |
| Gclc-RC | 4238 | CG2259-RC | 734..2884 | 17..2167 | 10740 | 100 | Plus |
| Gclc-RB | 3145 | CG2259-RB | 42..2192 | 17..2167 | 10740 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:30:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8104037..8105195 | 1798..640 | 5780 | 99.9 | Minus |
| X | 23542271 | X | 8105268..8105892 | 641..17 | 3125 | 100 | Minus |
| X | 23542271 | X | 8103535..8103721 | 2167..1981 | 935 | 100 | Minus |
| X | 23542271 | X | 8103787..8103971 | 1981..1797 | 925 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:30:04 has no hits.
BO13102.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:25:52 Download gff for
BO13102.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclc-RB | 42..2192 | 17..2169 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:59:29 Download gff for
BO13102.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclc-RB | 42..2192 | 17..2169 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:20:23 Download gff for
BO13102.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclc-RB | 42..2192 | 17..2169 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:20:23 Download gff for
BO13102.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8103532..8103721 | 1981..2169 | 98 | <- | Minus |
| X | 8103788..8103969 | 1799..1980 | 100 | <- | Minus |
| X | 8104037..8105193 | 642..1798 | 99 | <- | Minus |
| X | 8105268..8105892 | 17..641 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:29 Download gff for
BO13102.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7997565..7997754 | 1981..2169 | 98 | <- | Minus |
| arm_X | 7997821..7998002 | 1799..1980 | 100 | <- | Minus |
| arm_X | 7998070..7999226 | 642..1798 | 99 | <- | Minus |
| arm_X | 7999301..7999925 | 17..641 | 100 | | Minus |
BO13102.3prime Sequence
750 bp (676 high quality bases) assembled on 2006-05-08
> BO13102.3prime
ATGGTCTAGAAAGCTTGCTTTCTCCTCGCAGCAGCCGTTCTTGGCTAACT
GCTTCTGCAAGGCCGGCGGAATGAAGTCTTTCGTCTTCGTCTTGGAATGA
TAGTCTTGTCCGAGCAGCGCTGGCTCCACCTGCTTGCCCTCCTGGATGCC
TTGGATGCGCTTCAGCAAATCGTAGTTGATGCGCTCGCTCACCACGGAAT
CCTGCTTGTAATCCGGGTGGCTAAGCACCTGTTCGCGCATCCAGGTGGCC
GTGGTGATTAGCTCGCCGGCGGCACGCTTCTGGATAAAGCGAAGATACTG
TTCAATGGTGCAATGCGTATCGGTGTCCACCTCCATGGACTGCAAATAGC
TGCGGATCAATGGCACCAGACCCGGAAAAACGTTGGGCTTTCCATTGAAG
ATCTCATTGATGGACAGCAGCTGGAACAGCTCATTCTCCTCGTCATCGGT
GTCGGTGTGATCGCTATCGGTGCCATTCGATGATCCATTGGAGGAGCCAT
TAGTGCCGTTAGTGGTGCCACTTCCGTGGCCATTCATCTTGGCCGAACCG
TTGGTCAGAGGCTGCTGCTCTTCCTGGTCACTGTTCTCGCTGCCATTCCC
ATTTCCATTCGCCAGTCCATTGCCATTCAAAGTGGCCTTGCCATTCGTCT
GGGCCTGGGCTTTAGCTTGCGCTTGAGCTTGTGCCTGCGCCTTGGCCGCC
CTCTGCTCGGTGGTCTTCGAGGATTTGCGGAACCAAAACTTCTCCTTGCG
BO13102.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:58:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2259-PA | 2154 | Gclc-RA | 1420..2151 | 750..19 | 3660 | 100 | Minus |
| CG2259-PB | 2154 | Gclc-RB | 1420..2151 | 750..19 | 3660 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:16:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gclc-RD | 3231 | CG2259-RD | 1547..2278 | 750..19 | 3660 | 100 | Minus |
| Gclc-RC | 4238 | CG2259-RC | 2153..2884 | 750..19 | 3660 | 100 | Minus |
| Gclc-RB | 3145 | CG2259-RB | 1461..2192 | 750..19 | 3660 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:16:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8104037..8104399 | 388..750 | 1815 | 100 | Plus |
| X | 23542271 | X | 8103535..8103721 | 19..205 | 935 | 100 | Plus |
| X | 23542271 | X | 8103787..8103971 | 205..389 | 925 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:16:29 has no hits.
BO13102.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:54:54 Download gff for
BO13102.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclc-PA | 1420..2154 | 16..750 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:37:24 Download gff for
BO13102.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2259-PB | 1420..2154 | 16..750 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 05:02:09 Download gff for
BO13102.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclc-RB | 1461..2192 | 19..750 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:08:10 Download gff for
BO13102.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclc-RB | 1461..2192 | 19..750 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:08:10 Download gff for
BO13102.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8103535..8103721 | 19..205 | 100 | <- | Plus |
| X | 8103788..8103969 | 206..387 | 100 | <- | Plus |
| X | 8104037..8104399 | 388..750 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 05:02:09 Download gff for
BO13102.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7997568..7997754 | 19..205 | 100 | <- | Plus |
| arm_X | 7997821..7998002 | 206..387 | 100 | <- | Plus |
| arm_X | 7998070..7998432 | 388..750 | 100 | | Plus |
BO13102.5prime Sequence
757 bp (747 high quality bases) assembled on 2006-05-08
> BO13102.5prime
GAAGTTATCAGTCGACATGGGTCTACTGAGCGAGGGCAGTCCACTCTCCT
GGGAGGAGACCAAGGCGCTGGCTGATCATGTGCGTGAGCATGGCGTCAAT
CAGTTCATCAACTTGTACCACAGACTCAAGGATCGCCAGGGTGACATATT
GAAATGGGGCGACGAGGTGGAGTACATTATTGTCAAGTTCGACGATGAAC
AGAAGGTGGCACGTGTGGCGCTGCGCGCCCAGGATCTGCTGGCACAGCTC
AATGAGAAGGAACTGGCCGATCCCAATGGTGTCAAGTCGCTGTGGCGTCC
GGAATACGGAGCCTACATGATTGAGGGCACACCGGGCAAACCCTTTGGCG
GTCTGATGGCACACTTCAATCTGGTTGAGGCCAATATGCGCTATCGTCGC
GAAGAGGTCACCGAGCTGCTGGCCAAGGACGAGTGCGTTATGTCCATTAC
GAATTTCCCACGACTCGGCGCACCAAATTTCACTTATCCGCTTGCCCAGC
CGCGTCCCGAGGATCCTCTCAGTTCAGCCCGCTCGCTCTACTTCCCGGAT
GAGGCCATCTTTCCGGGTCACCCGCGTTTCAAGACACTCACGCGTAACAT
TCGCAAGCGACGCGGCGAGAAGGTGTCCATCAAGCTAAAAGTTTTCAAGG
ACACAAAGACGAAGCTACCGGTGGAGGGTGCTCCGCCTGGCGAACCGGAT
GTGGTGCTCCTGGACGCCCATGGCTTCGGCATGGGCTGCTGTTGCTTGCA
GCTCACC
BO13102.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:58:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2259-PA | 2154 | Gclc-RA | 1..702 | 17..718 | 3510 | 100 | Plus |
| CG2259-PB | 2154 | Gclc-RB | 1..702 | 17..718 | 3510 | 100 | Plus |
| CG2259-PA | 2154 | Gclc-RA | 706..741 | 722..757 | 180 | 100 | Plus |
| CG2259-PB | 2154 | Gclc-RB | 706..741 | 722..757 | 180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:36:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gclc-RD | 3231 | CG2259-RD | 128..868 | 17..757 | 3660 | 99.7 | Plus |
| Gclc-RC | 4238 | CG2259-RC | 734..1474 | 17..757 | 3660 | 99.7 | Plus |
| Gclc-RB | 3145 | CG2259-RB | 42..782 | 17..757 | 3660 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 09:36:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8105268..8105892 | 641..17 | 3125 | 100 | Minus |
| X | 23542271 | X | 8105078..8105195 | 757..640 | 545 | 97.5 | Minus |
Blast to na_te.dros performed on 2015-02-02 09:36:37 has no hits.
BO13102.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:54:55 Download gff for
BO13102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclc-PA | 1..741 | 17..757 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:37:26 Download gff for
BO13102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2259-PB | 1..741 | 17..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:54:36 Download gff for
BO13102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclc-RB | 34..782 | 10..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:16:14 Download gff for
BO13102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclc-RB | 34..782 | 10..757 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:16:14 Download gff for
BO13102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8105078..8105193 | 642..757 | 98 | <- | Minus |
| X | 8105268..8105900 | 5..641 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:54:36 Download gff for
BO13102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7999111..7999226 | 642..757 | 98 | <- | Minus |
| arm_X | 7999301..7999933 | 5..641 | 99 | | Minus |
BO13102.pep Sequence
Translation from 16 to 2185
> BO13102.pep
MGLLSEGSPLSWEETKALADHVREHGVNQFINLYHRLKDRQGDILKWGDE
VEYIIVKFDDEQKVARVALRAQDLLAQLNEKELADPNGVKSLWRPEYGAY
MIEGTPGKPFGGLMAHFNLVEANMRYRREEVTELLAKDECVMSITNFPRL
GAPNFTYPLAQPRPEDPLSSARSLYFPDEAIFPGHPRFKTLTRNIRKRRG
EKVSIKLKVFKDTKTKLPVEGAPPGEPDVVLLDAMGFGMGCCCLQLTFQA
CNITEARRLYDQLAPLCPIMLALTAASPIYRGYLTESDCRWNVISSSVDC
RTEEERGLAPLDQQKFRIAKSRYDSIDSYLSPEGAKYNDVPLTYDEKVYQ
RLVEGGIDHLLAQHVAHLFIRDTVSLFSEKVHQNDNEDTDHFENIQSTNW
QTMRFKPPPPNSSIGWRVEFRPCEAQISDFENAAIVCFVVLLTRVILSYQ
LNFLTPISKVDENMQTAQKRDACRKEKFWFRKSSKTTEQRAAKAQAQAQA
QAKAQAQTNGKATLNGNGLANGNGNGSENSDQEEQQPLTNGSAKMNGHGS
GTTNGTNGSSNGSSNGTDSDHTDTDDEENELFQLLSINEIFNGKPNVFPG
LVPLIRSYLQSMEVDTDTHCTIEQYLRFIQKRAAGELITTATWMREQVLS
HPDYKQDSVVSERINYDLLKRIQGIQEGKQVEPALLGQDYHSKTKTKDFI
PPALQKQLAKNGCCEEKASFLDH
BO13102.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gclc-PD | 717 | CG2259-PD | 1..717 | 1..717 | 3778 | 100 | Plus |
| Gclc-PC | 717 | CG2259-PC | 1..717 | 1..717 | 3778 | 100 | Plus |
| Gclc-PB | 717 | CG2259-PB | 1..717 | 1..717 | 3778 | 100 | Plus |
| Gclc-PA | 717 | CG2259-PA | 1..717 | 1..717 | 3778 | 100 | Plus |
