Clone Sequence Records
BO13137.complete Sequence
760 bp assembled on 2010-11-19
GenBank Submission: KX794651
> BO13137.complete
GAAGTTATCAGTCGACATGCAGATGAAAAGTGGAATATTAATAGCATTAT
GTCTATGCCTTTCGTTGAACGAAGGCCTGGCCCTTCTGGAGCACGAAGGC
GAGACCATCAACAGATGCATCCAAAACTATGGCGGACTTACTGCGGAAAA
TGCCGAACGTCTAGAACGATTCAAGGAATGGTCGGATAGCTACGAGGAAA
TCCCCTGCTTCACGCGCTGCTATTTGTCCGAGATGTTCGACTTTTACAAT
AACTTAACGGGCTTCAATAAGGACGGAATTGTGGGCGTCTTTGGAAGACC
CGTCTACGAAGCCTGCCGAAAGAAATTGGAACTGCCATTCGAATCAGGCG
AGAGCAGCTGCAAACATGCCTACGAGGGCTTCCACTGCATCACCAACATG
GAAAGCCACCCGTTCACGGTTATTGACAACATGCCAAACATATCCCCGTC
GGCCAAGGATGCAATGAAGGACTGCCTTCAGGATGTCCACCAGGACGAGT
GGAAGAGCTTCGATGCCTTCGCCTACTATCCTGTCAATGAACCGATTCCG
TGCTTCACCCGGTGCTTCGTGGACAAGCTGCATATCTTCGAGGAGAAAAC
GCGTCTTTGGAAACTGGAGGCGATGAAGCAAAACCTGGGCATTCCGGCCA
AAGGAGCTCGCATAAGGACCTGCCATCGGCACCGCGGCAGGGACCGATGT
GCCACATATTACAAACAGTTCACCTGCTACGCGATGGCTGTTGCAAGCTT
TCTAGACCAT
BO13137.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:35:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp83cd-RA | 729 | CG15582-PA | 1..726 | 17..742 | 3630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp83cd-RA | 899 | CG15582-RA | 54..779 | 17..742 | 3630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6109269..6109613 | 398..742 | 1725 | 100 | Plus |
3R | 32079331 | 3R | 6108300..6108630 | 67..397 | 1655 | 100 | Plus |
3R | 32079331 | 3R | 6108187..6108237 | 17..67 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:35:55 has no hits.
BO13137.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-19 09:48:56 Download gff for
BO13137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83cd-RA | 54..779 | 17..744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:33:27 Download gff for
BO13137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83cd-RA | 54..779 | 17..744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:28 Download gff for
BO13137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83cd-RA | 54..779 | 17..744 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:28 Download gff for
BO13137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6108187..6108237 | 17..67 | 100 | -> | Plus |
3R | 6108301..6108630 | 68..397 | 100 | -> | Plus |
3R | 6109269..6109613 | 398..744 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:33:27 Download gff for
BO13137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1933909..1933959 | 17..67 | 100 | -> | Plus |
arm_3R | 1934023..1934352 | 68..397 | 100 | -> | Plus |
arm_3R | 1934991..1935335 | 398..744 | 99 | | Plus |
BO13137.5prime Sequence
625 bp (471 high quality bases) assembled on 2010-02-20
> BO13137.5prime
GAAGGCGAGACCATCAACAGATGCATCCAAAACTATGGCGGACTTACTGC
GGAAAATGCCGAACGTCTAGAACGATTCAAGGAATGGTCGGATAGCTACG
AGGAAATCCCCTGCTTCACGCGCTGCTATTTGTCCGAGATGTTCGACTTT
TACAATAACTTAACGGGCTTCAATAAGGACGGAATTGTGGGCGTCTTTGG
AAGACCCGTCTACGAAGCCTGCCGAAAGAAATTGGAACTGCCATTCGAAT
CAGGCGAGAGCAGCTGCAAACATGCCTACGAGGGCTTCCACTGCATCACC
AACATGGAAAGCCACCCGTTCACGGTTATTGACAACATGCCAAACATATC
CCCGTCCGCCACGGATGCAATGAAGGACTGCCTTCAGGATGTCCACCAGG
ACGAGTGGAAAAGCTTTCGATGCCTTCGCCTACTATCCTGTCAATGAACC
GATTCCGTGCTTTCACCCGGTGCTTCGTGGACAAGCTGCATAATCTTCGA
GGAAAAAACGCGTCTTTTGGAACTGGAGGCGATGAAGCAAAACCGGGGCT
TTCCGGCCCAGTGAACTCGCATAAGGCCCTGGCATCGGCACCGCGGCAGG
GACCGATGTGCCACATAATACAAAC
BO13137.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 01:49:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp83cd-RA | 899 | CG15582-RA | 132..753 | 1..625 | 2825 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 01:49:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6108328..6108630 | 1..303 | 1515 | 100 | Plus |
3R | 32079331 | 3R | 6109269..6109587 | 304..625 | 1235 | 94.4 | Plus |
Blast to na_te.dros performed on 2015-01-30 01:49:33 has no hits.
BO13137.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-21 03:28:04 Download gff for
BO13137.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83cd-RA | 132..753 | 1..625 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 08:59:38 Download gff for
BO13137.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83cd-RA | 132..753 | 1..625 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 03:56:07 Download gff for
BO13137.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83cd-RA | 132..753 | 1..625 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 03:56:07 Download gff for
BO13137.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6109269..6109587 | 304..625 | 94 | | Plus |
3R | 6108328..6108630 | 1..303 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 08:59:38 Download gff for
BO13137.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1934050..1934352 | 1..303 | 100 | -> | Plus |
arm_3R | 1934991..1935309 | 304..625 | 94 | | Plus |
BO13137.3prime Sequence
361 bp (83 high quality bases) assembled on 2010-02-20
> BO13137.3prime
CCTTTAGGCCGGAATGCCCAGGTTTTGCTTCATCGCCTCCAGTTTCCAAA
GACGCGTTTTCTCCTCGAAGATATGCAGCTTGTCCACGAAGCACCGGGTG
AAGCACGGAATCGGTTCATTGACAGGATAGTAGGCGAAGGCATCGAAGCT
CTTCCACTCGTCCTGGAGGACATCCTGAAGGCAGTCCTTCATTGCATCCT
TGGCCGACGGGGATATGTTTGGCATGTTGTCAATAACCGTGAACGGGTGG
CTTTCCATGTTGGTGATGCAGTGGAAGCCCTCGTAGGAATGTTTGCAGCT
GCTCTCGCCTGATTCGAATGGCAGTTCCAATTTCTTTCGGCAGGCTTCGT
ATACGGGTCTT
BO13137.3prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 14:59:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp83cd-RA | 899 | CG15582-RA | 332..691 | 361..1 | 1735 | 98.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 14:59:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6109269..6109520 | 258..7 | 1245 | 99.6 | Minus |
3R | 32079331 | 3R | 6108528..6108630 | 361..259 | 485 | 98.1 | Minus |
Blast to na_te.dros performed on 2015-02-10 14:59:29 has no hits.
BO13137.3prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-21 03:28:03 Download gff for
BO13137.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83cd-RA | 332..691 | 1..361 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 12:17:15 Download gff for
BO13137.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83cd-RA | 332..691 | 1..361 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:33:29 Download gff for
BO13137.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83cd-RA | 332..691 | 1..361 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:33:29 Download gff for
BO13137.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6108528..6108630 | 259..361 | 98 | -> | Minus |
3R | 6109269..6109525 | 1..258 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 12:17:15 Download gff for
BO13137.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1934250..1934352 | 259..361 | 98 | -> | Minus |
arm_3R | 1934991..1935247 | 1..258 | 99 | | Minus |
BO13137.pep Sequence
Translation from 16 to 760
> BO13137.pep
MQMKSGILIALCLCLSLNEGLALLEHEGETINRCIQNYGGLTAENAERLE
RFKEWSDSYEEIPCFTRCYLSEMFDFYNNLTGFNKDGIVGVFGRPVYEAC
RKKLELPFESGESSCKHAYEGFHCITNMESHPFTVIDNMPNISPSAKDAM
KDCLQDVHQDEWKSFDAFAYYPVNEPIPCFTRCFVDKLHIFEEKTRLWKL
EAMKQNLGIPAKGARIRTCHRHRGRDRCATYYKQFTCYAMAVASFLDH
BO13137.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:46:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp83cd-PA | 242 | CG15582-PA | 1..242 | 1..242 | 1334 | 100 | Plus |
Obp83ef-PA | 245 | CG31557-PA | 1..230 | 3..238 | 200 | 24.2 | Plus |