Clone BO13150 Report

Search the DGRC for BO13150

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:131
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG2662-RA
Protein status:BO13150.pep: validated full length
Sequenced Size:1372

Clone Sequence Records

BO13150.3prime Sequence

746 bp (706 high quality bases) assembled on 2006-05-08

> BO13150.3prime
ATGGTCTAGAAAGCTTGCATCTAGCCAGGCGAGGCCAACGTCATTGGATT
GAGTCTGCAGGGACATCACGAGTTCGAAGACGCGCAGCGCCGGTCCCAGC
TTCAAACCGAATCCGTTCATCACATCGTGGCGATTGAGCAGCAGCAGGGA
GGCGCCATCAATGTCCTGGTAGCGGAACACGTTCGCCTCCTTCGGATAGC
GCTTGGCAACAAATTGGACGACCTGTTCCACGGACCAGGTTGATACTGGA
TGGCTTCTTCTCTCTACAGCTGTGATTGGCGTTAGGCGTAAGGAAAGCGA
TTCCTGTTCTGGCCCAGGCAGATCGTTATTCTCAATCTGCTCAGTCTCCA
TATCTACCGGCTCGACCTTCTCCACCTTGACTTTTATTTGTGCCGGCTCC
TCATCCTCCTCCTTTTTGTACTCTTTCTTCTTTTCTGTTTTCAAGGGCTG
TCTACGTTTGGCTAGCTTCTCAATCTTCGCTGCCTTTTCTTGCCCGGTGG
GCTCCGATTGGACGCGCTTCTTGCGACCCGCATTCGACTTCCTCGGCACC
ACCGGCTGGGCCTGGTCCTCGCGGCTCGCAGTGGATTTCCTGGCCCCCGT
TTGCTCCTCGCTGGATGCACTCGTGCTGCCGCCGATGTTACACGCCTCGC
ATCGGAAGCATCTCCAATTGGGATTGGCCTCGACGGCTTTGCTCTGCTTG
AGAGTGGGATCATTGCAGTCCGGGTGATAGGCATCCACGCATAAAC

BO13150.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:59:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG2662-PA 1341 CG2662-RA 611..1338 746..19 3640 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 12:34:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG2662-RB 1765 CG2662-RB 697..1424 746..19 3640 100 Minus
CG2662-RA 1645 CG2662-RA 697..1424 746..19 3640 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 12:33:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2699965..2700692 746..19 3640 100 Minus
Blast to na_te.dros performed 2015-02-06 12:34:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsub\bilbo 5540 Dsub\bilbo 5540bp Derived from U73803 (Rel. 54, Last updated, Version 1). 929..981 666..718 112 67.9 Plus

BO13150.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:56:17 Download gff for BO13150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2662-PA 611..1341 18..746 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:39:22 Download gff for BO13150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2662-PA 611..1341 18..746 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 07:01:37 Download gff for BO13150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2662-RA 697..1428 13..746 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:41:55 Download gff for BO13150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2662-RA 697..1428 13..746 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:41:55 Download gff for BO13150.3prime
Subject Subject Range Query Range Percent Splice Strand
X 2699965..2700696 13..746 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 07:01:37 Download gff for BO13150.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2593998..2594729 13..746 99   Minus

BO13150.5prime Sequence

779 bp (673 high quality bases) assembled on 2006-05-08

> BO13150.5prime
GAAGTTATCAGTCGACATGAAACAATCCAAGGACGAAGACAAGGAGGAAT
CGCCGGTTCAACCGACGACCCACAATTCCAGCGCAGGCAGCAACGGCCAC
GACGCCAAATCTCCGGTGGTCACTACTGCACCAGCGGCAACTTGTTCCGT
ATCGGTTTCGGATGCTTCGGGGGCCGGAGCTTCCGTTCGCACCACTGGAC
GGGTGAAGAAACCCAAACAGGTGTACGATCCCTCGGACAACTATGTGTCC
CGGGCCAGCAGCAACCGCAACTCTCTCTCTTCAGTCCCGGCCACCTCCAA
TGTCCAGTCACCGCCAGTCAAGGAGGCCACCGATTCGCAGGACTCCACAA
CCAGTCCTGTTTCGGAGCAGCAGCAGCAGCAGCTACAGCAAGCGGCTCAA
CTTCGCAACTTCGACACGTGCCAGAAGTGTGGCAAAAGCGAACCCAAGCG
CGGATCTGGCCATAAGAGCAACTTCCTCACTTGCAAGGGCTGCATGCAGA
AATGGCACTTCCCCTGCTTGCCGATCACGTTCCACAACCAGAGCACAGCC
CGCAAGAAGTTCAAGTGCGACAAGTGTCGCTACTGCCGGTTATGCAACGT
GAGGGGGCCAGGTCTTTCCATTTGCAGTTTATGCGTGGATGCCTATCACC
CGGACTGCAATGATCCCACTCTCAAGCAAAGCAAAGCCGTCGAGGCCCAT
CCCAATTGGAGATGCTTCCGATGCGAGGCGTGTAACATCGGGGGCAGCAC
GAGTGGATCCAGCGAGGAGCAAACGGGGG

BO13150.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:59:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG2662-PA 1341 CG2662-RA 1..763 17..779 3715 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:36:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG2662-RB 1765 CG2662-RB 87..849 17..779 3755 99.5 Plus
CG2662-RA 1645 CG2662-RA 87..849 17..779 3755 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:36:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2699042..2699339 207..504 1490 100 Plus
X 23542271 X 2699842..2700117 504..779 1320 98.6 Plus
X 23542271 X 2698787..2698978 17..208 960 100 Plus
Blast to na_te.dros performed 2015-02-10 22:36:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsub\bilbo 5540 Dsub\bilbo 5540bp Derived from U73803 (Rel. 54, Last updated, Version 1). 929..981 707..655 112 67.9 Minus

BO13150.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:56:18 Download gff for BO13150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2662-PA 1..763 17..779 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:39:24 Download gff for BO13150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2662-PA 1..763 17..779 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:59:40 Download gff for BO13150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2662-RA 81..849 11..779 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:58:13 Download gff for BO13150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2662-RA 81..849 11..779 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:58:13 Download gff for BO13150.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2699842..2700117 504..779 98   Plus
X 2698781..2698978 11..208 98 -> Plus
X 2699044..2699338 209..503 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:59:40 Download gff for BO13150.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2592814..2593011 11..208 98 -> Plus
arm_X 2593077..2593371 209..503 100 -> Plus
arm_X 2593875..2594150 504..779 98   Plus

BO13150.complete Sequence

1372 bp assembled on 2006-10-11

GenBank Submission: FJ632695

> BO13150.complete
GAAGTTATCAGTCGACATGAAACAATCCAAGGACGAAGACAAGGAGGAAT
CGCCGGTTCAACCGACGACCCACAATTCCAGCGCAGGCAGCAACGGCCAC
GACGCCAAATCTCCGGTGGTCACTACTGCACCAGCGGCAACTTGTTCCGT
ATCGGTTTCGGATGCTTCGGGGGCCGGAGCTTCCGTTCGCACCACTGGAC
GGGTGAAGAAACCCAAACAGGTGTACGATCCCTCGGACAACTATGTGTCC
CGGGCCAGCAGCAACCGCAACTCTCTCTCTTCAGTCCCGGCCACCTCCAA
TGTCCAGTCACCGCCAGTCAAGGAGGCCACCGATTCGCAGGACTCCACAA
CCAGTCCTGTTTCGGAGCAGCAGCAGCAGCAGCTACAGCAAGCGGCTCAA
CTTCGCAACTTCGACACGTGCCAGAAGTGTGGCAAAAGCGAACCCAAGCG
CGGATCTGGCCATAAGAGCAACTTCCTCACTTGCAAGGGCTGCATGCAGA
AATGGCACTTCCCCTGCTTGCCGATCACGTTCCACAACCAGAGCACAGCC
CGCAAGAAGTTCAAGTGCGACAAGTGTCGCTACTGCCGGTTATGCAACGT
GAGGGGGCCAGGTCTTTCCATTTGCAGTTTATGCGTGGATGCCTATCACC
CGGACTGCAATGATCCCACTCTCAAGCAGAGCAAAGCCGTCGAGGCCAAT
CCCAATTGGAGATGCTTCCGATGCGAGGCGTGTAACATCGGCGGCAGCAC
GAGTGCATCCAGCGAGGAGCAAACGGGGGCCAGGAAATCCACTGCGAGCC
GCGAGGACCAGGCCCAGCCGGTGGTGCCGAGGAAGTCGAATGCGGGTCGC
AAGAAGCGCGTCCAATCGGAGCCCACCGGGCAAGAAAAGGCAGCGAAGAT
TGAGAAGCTAGCCAAACGTAGACAGCCCTTGAAAACAGAAAAGAAGAAAG
AGTACAAAAAGGAGGAGGATGAGGAGCCGGCACAAATAAAAGTCAAGGTG
GAGAAGGTCGAGCCGGTAGATATGGAGACTGAGCAGATTGAGAATAACGA
TCTGCCTGGGCCAGAACAGGAATCGCTTTCCTTACGCCTAACGCCAATCA
CAGCTGTAGAGAGAAGAAGCCATCCAGTATCAACCTGGTCCGTGGAACAG
GTCGTCCAATTTGTTGCCAAGCGCTATCCGAAGGAGGCGAACGTGTTCCG
CTACCAGGACATTGATGGCGCCTCCCTGCTGCTGCTCAATCGCCACGATG
TGATGAACGGATTCGGTTTGAAGCTGGGACCGGCGCTGCGCGTCTTCGAA
CTCGTGATGTCCCTGCAGACTCAATCCAATGACGTTGGCCTCGCCTGGCT
AGATGCAAGCTTTCTAGACCAT

BO13150.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:41:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG2662-RB 1341 CG2662-PB 1..1338 17..1354 6690 100 Plus
CG2662-RA 1341 CG2662-PA 1..1338 17..1354 6690 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:41:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG2662-RB 1765 CG2662-RB 87..1424 17..1354 6690 100 Plus
CG2662-RA 1645 CG2662-RA 87..1424 17..1354 6690 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:40:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2699842..2700692 504..1354 4255 100 Plus
X 23542271 X 2699042..2699339 207..504 1490 100 Plus
X 23542271 X 2698787..2698978 17..208 960 100 Plus
Blast to na_te.dros performed 2014-11-27 19:41:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsub\bilbo 5540 Dsub\bilbo 5540bp Derived from U73803 (Rel. 54, Last updated, Version 1). 929..981 707..655 112 67.9 Minus

BO13150.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:48:46 Download gff for BO13150.complete
Subject Subject Range Query Range Percent Splice Strand
CG2662-RA 1..1341 17..1355 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:03:36 Download gff for BO13150.complete
Subject Subject Range Query Range Percent Splice Strand
CG2662-RA 78..1425 11..1360 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:04 Download gff for BO13150.complete
Subject Subject Range Query Range Percent Splice Strand
CG2662-RA 87..1424 17..1356 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:48:46 Download gff for BO13150.complete
Subject Subject Range Query Range Percent Splice Strand
CG2662-RA 78..1425 11..1360 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:06:15 Download gff for BO13150.complete
Subject Subject Range Query Range Percent Splice Strand
CG2662-RA 87..1424 17..1356 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:06:15 Download gff for BO13150.complete
Subject Subject Range Query Range Percent Splice Strand
X 2698787..2698978 17..208 100 -> Plus
X 2699044..2699338 209..503 100 -> Plus
X 2699842..2700692 504..1356 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:04 Download gff for BO13150.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2592820..2593011 17..208 100 -> Plus
arm_X 2593077..2593371 209..503 100 -> Plus
arm_X 2593875..2594725 504..1356 99   Plus

BO13150.pep Sequence

Translation from 16 to 1372

> BO13150.pep
MKQSKDEDKEESPVQPTTHNSSAGSNGHDAKSPVVTTAPAATCSVSVSDA
SGAGASVRTTGRVKKPKQVYDPSDNYVSRASSNRNSLSSVPATSNVQSPP
VKEATDSQDSTTSPVSEQQQQQLQQAAQLRNFDTCQKCGKSEPKRGSGHK
SNFLTCKGCMQKWHFPCLPITFHNQSTARKKFKCDKCRYCRLCNVRGPGL
SICSLCVDAYHPDCNDPTLKQSKAVEANPNWRCFRCEACNIGGSTSASSE
EQTGARKSTASREDQAQPVVPRKSNAGRKKRVQSEPTGQEKAAKIEKLAK
RRQPLKTEKKKEYKKEEDEEPAQIKVKVEKVEPVDMETEQIENNDLPGPE
QESLSLRLTPITAVERRSHPVSTWSVEQVVQFVAKRYPKEANVFRYQDID
GASLLLLNRHDVMNGFGLKLGPALRVFELVMSLQTQSNDVGLAWLDASFL
DH

BO13150.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:51:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG2662-PB 446 CG2662-PB 1..446 1..446 2341 100 Plus
CG2662-PA 446 CG2662-PA 1..446 1..446 2341 100 Plus