Clone Sequence Records
BO13207.3prime Sequence
731 bp (689 high quality bases) assembled on 2006-05-08
> BO13207.3prime
ATGGTCTAGAAAGCTTGCGTCCACCTCCTCGACGGTGGGACCCTTATAAC
CGCCAGCTTGCTGTCCAAAGTTTGGAGCCTGCTGGCCATCTCCACCTCCC
TTGTGCATCTTGGTCATGATGGGGCTGCAGAACTGTTCCAGTTCCTTCAG
TTTGTACTCGTACTCCTCCTTCTCGGCGGTGGTGTTGCTGTCCAACCACT
TCATCGCCTCGCTGCAACGCTCCACAATACTGCTCTTGTCGGCTGCACTG
ATGCGATCGCCACCATTCTCGGCCGCCTCCTTTACACCAAACAAATAGGT
CTCCAGTTGATTGCGGGCGGCGATCCGCTGGCGATGGCGCTCGTCCTCCT
CGGCGTACTTCTCCGCCTCACTGAGCATGCGGTCGATGTCCGCCTGCGAC
AGACGACCCTTGTCGTTCTTGATGGTAATGTTCTTGGCGTTGCCAGTGCC
CTGCTCCTTGGCGGTCACATTCAGGATACCGTTTGCGTCCAAATCGAAAG
TAACGTCGATCTTGGGCACTCCACGGGGTGCGGGTGGAACGCCAGTGAGA
TCGAATGTGCCCAATACATTGTTGTCCTTGGTCAGAGCCCTCTCGCCCTC
AAACACTTGAATGGTCACCGCCGGCTGGTTGTCGGCATAGGTGGTGAAGG
TCTTGGACTGCTTGCATGGAATGCGGCTGTTGCGCTCAATTCACCTTGGT
CATCACCCCGCCCGGCGGTTTCTATGCCCAA
BO13207.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:00:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5436-PA | 1908 | Hsp68-RA | 1234..1905 | 690..19 | 3360 | 100 | Minus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 1733..1765 | 194..162 | 165 | 100 | Minus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 1733..1765 | 194..162 | 165 | 100 | Minus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 1733..1765 | 194..162 | 165 | 100 | Minus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 1733..1765 | 194..162 | 165 | 100 | Minus |
| CG18743-PA | 1929 | Hsp70Ab-RA | 1733..1765 | 194..162 | 140 | 96.9 | Minus |
| CG31366-PA | 1929 | Hsp70Aa-RA | 1733..1765 | 194..162 | 140 | 96.9 | Minus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 1345..1376 | 579..548 | 135 | 96.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:26:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp68-RA | 2231 | CG5436-RA | 1401..2111 | 731..19 | 3500 | 99.6 | Minus |
| Hsp70Ab-RA | 2375 | CG18743-RA | 1449..1852 | 731..326 | 825 | 80.5 | Minus |
| Hsp70Aa-RA | 2382 | CG31366-RA | 1450..1853 | 731..326 | 825 | 80.5 | Minus |
| Hsp70Ab-RA | 2375 | CG18743-RA | 1982..2077 | 199..104 | 210 | 82.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:26:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24055200..24055910 | 19..731 | 3450 | 99.6 | Plus |
| 3R | 32079331 | 3R | 11954692..11955053 | 326..687 | 790 | 81.2 | Plus |
| 3R | 32079331 | 3R | 11960025..11960386 | 687..326 | 790 | 81.2 | Minus |
| 3R | 32079331 | 3R | 12507271..12507632 | 687..326 | 745 | 80.4 | Minus |
| 3R | 32079331 | 3R | 12465960..12466321 | 326..687 | 730 | 80.1 | Plus |
| 3R | 32079331 | 3R | 12503988..12504349 | 687..326 | 730 | 80.1 | Minus |
| 3R | 32079331 | 3R | 12510554..12510915 | 687..326 | 730 | 80.1 | Minus |
| 3R | 32079331 | 3R | 13046656..13046988 | 687..355 | 480 | 76.3 | Minus |
| 3R | 32079331 | 3R | 15245603..15245934 | 686..355 | 430 | 75.3 | Minus |
| X | 23542271 | X | 11802928..11803220 | 343..635 | 295 | 73.4 | Plus |
| 3R | 32079331 | 3R | 11954467..11954562 | 104..199 | 210 | 81.2 | Plus |
| 3R | 32079331 | 3R | 11960516..11960611 | 199..104 | 210 | 81.2 | Minus |
| 3R | 32079331 | 3R | 12465735..12465829 | 104..198 | 205 | 81.1 | Plus |
| 2R | 25286936 | 2R | 14253752..14253851 | 440..539 | 200 | 80 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:26:52 has no hits.
BO13207.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:57:52 Download gff for
BO13207.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp68-PA | 1197..1908 | 15..729 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:41:34 Download gff for
BO13207.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5436-PA | 1197..1908 | 15..729 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:58:38 Download gff for
BO13207.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp68-RA | 1403..2116 | 11..729 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:54:49 Download gff for
BO13207.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp68-RA | 1403..2116 | 11..729 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:54:49 Download gff for
BO13207.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24055195..24055908 | 11..729 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:58:38 Download gff for
BO13207.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19880917..19881630 | 11..729 | 99 | | Plus |
BO13207.5prime Sequence
686 bp (683 high quality bases) assembled on 2006-05-08
> BO13207.5prime
GAAGTTATCAGTCGACATGCCAGCCATTGGAATCGATTTGGGCACCACAT
ACTCCTGCGTGGGAGTCTTCCAGTACGGAAAAGTGGAGATCATTGCCAAC
GACCAGGGTAACCGTACCACACCATCGTACGTGGCCTTCACCGACTCGGA
ACGCCTTATTGGAGATGCCGCCAAGAACCAGGTGGCCATGAACCCCAAGA
ACTCTGTGTTCGATGCCAAACGCCTGATTGGGCGTCGTTTCGACGATTCC
AAGATCCAGGAGGACATTAAGCACTGGCCGTTCAAAGTGATCAACGACAA
CGGCAAACCAAAGATAAGCGTGGAGTTCAAGGGCGCGAATAAGTGCTTCT
CTCCCGAGGAGATTAGCTCGATGGTACTCACCAAAATGAAGGAGACTGCA
GAAGCCTACCTGGGCACTACAGTGAAGGACGCTGTCATCACAGTGCCGGC
CTACTTCAACGACTCCCAGCGCCAGGCAACAAAGGATGCTGGTGCCATCG
CTGGCATCAATGTGCTCCGCATCATCAACGAGCCAACAGCGGCGGCTCTG
GCCTACGGCCTGGACAAGAATCTGAAGGGAGAGCGCAATGTGCTGATTTT
CGATTTGGGCGGTGGTACTTTTGACGTCTCCATCTTGACCATTGACGAGG
GATCCCTGTTTGAGGTGCGCTCGACTGCGGGAGACA
BO13207.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:00:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5436-PA | 1908 | Hsp68-RA | 1..670 | 17..686 | 3350 | 100 | Plus |
| CG18743-PA | 1929 | Hsp70Ab-RA | 493..596 | 509..612 | 220 | 88.4 | Plus |
| CG31366-PA | 1929 | Hsp70Aa-RA | 493..596 | 509..612 | 220 | 88.4 | Plus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 79..181 | 95..197 | 215 | 88.3 | Plus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 79..181 | 95..197 | 215 | 88.3 | Plus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 79..181 | 95..197 | 215 | 88.3 | Plus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 79..181 | 95..197 | 215 | 88.3 | Plus |
| CG18743-PA | 1929 | Hsp70Ab-RA | 412..461 | 428..477 | 175 | 94 | Plus |
| CG31366-PA | 1929 | Hsp70Aa-RA | 412..461 | 428..477 | 175 | 94 | Plus |
| CG8937-PC | 1668 | Hsc70-1-RC | 181..233 | 446..498 | 165 | 92.4 | Plus |
| CG8937-PD | 1668 | Hsc70-1-RD | 181..233 | 446..498 | 165 | 92.4 | Plus |
| CG8937-PA | 1926 | Hsc70-1-RA | 439..491 | 446..498 | 165 | 92.4 | Plus |
| CG7756-PA | 1902 | Hsc70-2-RA | 514..605 | 521..612 | 160 | 86.9 | Plus |
| CG8542-PA | 2061 | Hsc70-5-RA | 577..627 | 443..493 | 155 | 92.1 | Plus |
| CG4264-PE | 1956 | Hsc70-4-RE | 154..188 | 161..195 | 150 | 97.1 | Plus |
| CG4264-PF | 1956 | Hsc70-4-RF | 154..188 | 161..195 | 150 | 97.1 | Plus |
| CG4264-PA | 1956 | Hsc70-4-RA | 154..188 | 161..195 | 150 | 97.1 | Plus |
| CG4264-PC | 1956 | Hsc70-4-RC | 154..188 | 161..195 | 150 | 97.1 | Plus |
| CG4264-PD | 1956 | Hsc70-4-RD | 154..188 | 161..195 | 150 | 97.1 | Plus |
| CG4264-PB | 1956 | Hsc70-4-RB | 154..188 | 161..195 | 150 | 97.1 | Plus |
| CG18743-PA | 1929 | Hsp70Ab-RA | 337..380 | 353..396 | 145 | 93.1 | Plus |
| CG31366-PA | 1929 | Hsp70Aa-RA | 337..380 | 353..396 | 145 | 93.1 | Plus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 533..596 | 549..612 | 145 | 89 | Plus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 533..596 | 549..612 | 145 | 89 | Plus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 533..596 | 549..612 | 145 | 89 | Plus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 533..596 | 549..612 | 145 | 89 | Plus |
| CG4264-PE | 1956 | Hsc70-4-RE | 427..470 | 434..477 | 145 | 93.1 | Plus |
| CG4264-PE | 1956 | Hsc70-4-RE | 79..137 | 86..144 | 145 | 89.8 | Plus |
| CG4264-PF | 1956 | Hsc70-4-RF | 427..470 | 434..477 | 145 | 93.1 | Plus |
| CG4264-PF | 1956 | Hsc70-4-RF | 79..137 | 86..144 | 145 | 89.8 | Plus |
| CG4264-PA | 1956 | Hsc70-4-RA | 427..470 | 434..477 | 145 | 93.1 | Plus |
| CG4264-PA | 1956 | Hsc70-4-RA | 79..137 | 86..144 | 145 | 89.8 | Plus |
| CG4264-PC | 1956 | Hsc70-4-RC | 427..470 | 434..477 | 145 | 93.1 | Plus |
| CG4264-PC | 1956 | Hsc70-4-RC | 79..137 | 86..144 | 145 | 89.8 | Plus |
| CG4264-PD | 1956 | Hsc70-4-RD | 427..470 | 434..477 | 145 | 93.1 | Plus |
| CG4264-PD | 1956 | Hsc70-4-RD | 79..137 | 86..144 | 145 | 89.8 | Plus |
| CG4264-PB | 1956 | Hsc70-4-RB | 427..470 | 434..477 | 145 | 93.1 | Plus |
| CG4264-PB | 1956 | Hsc70-4-RB | 79..137 | 86..144 | 145 | 89.8 | Plus |
| CG18743-PA | 1929 | Hsp70Ab-RA | 10..47 | 26..63 | 140 | 94.7 | Plus |
| CG31366-PA | 1929 | Hsp70Aa-RA | 10..47 | 26..63 | 140 | 94.7 | Plus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 10..47 | 26..63 | 140 | 94.7 | Plus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 10..47 | 26..63 | 140 | 94.7 | Plus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 10..47 | 26..63 | 140 | 94.7 | Plus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 10..47 | 26..63 | 140 | 94.7 | Plus |
| CG18743-PA | 1929 | Hsp70Ab-RA | 610..656 | 626..672 | 135 | 91.4 | Plus |
| CG31366-PA | 1929 | Hsp70Aa-RA | 610..656 | 626..672 | 135 | 91.4 | Plus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 610..656 | 626..672 | 135 | 91.4 | Plus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 610..656 | 626..672 | 135 | 91.4 | Plus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 610..656 | 626..672 | 135 | 91.4 | Plus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 610..656 | 626..672 | 135 | 91.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:44:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp68-RA | 2231 | CG5436-RA | 207..876 | 17..686 | 3350 | 100 | Plus |
| Hsp70Ab-RA | 2375 | CG18743-RA | 255..924 | 17..686 | 1430 | 81.2 | Plus |
| Hsp70Aa-RA | 2382 | CG31366-RA | 256..925 | 17..686 | 1430 | 81.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:44:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24056435..24057104 | 686..17 | 3350 | 100 | Minus |
| 3R | 32079331 | 3R | 11955620..11956289 | 686..17 | 1430 | 80.9 | Minus |
| 3R | 32079331 | 3R | 11958789..11959458 | 17..686 | 1430 | 80.9 | Plus |
| 3R | 32079331 | 3R | 12502752..12503421 | 17..686 | 1400 | 80.6 | Plus |
| 3R | 32079331 | 3R | 12506035..12506704 | 17..686 | 1400 | 80.6 | Plus |
| 3R | 32079331 | 3R | 12509318..12509987 | 17..686 | 1400 | 80.6 | Plus |
| 3R | 32079331 | 3R | 12466888..12467557 | 686..17 | 1385 | 80.4 | Minus |
| 3R | 32079331 | 3R | 15244379..15244986 | 27..634 | 1000 | 77.6 | Plus |
| 3R | 32079331 | 3R | 13045581..13046070 | 178..667 | 815 | 77.8 | Plus |
| 3L | 28110227 | 3L | 13975916..13976272 | 212..568 | 570 | 77.3 | Plus |
| 3R | 32079331 | 3R | 13044970..13045131 | 23..184 | 375 | 82.1 | Plus |
| 2R | 25286936 | 2R | 14254844..14255025 | 567..386 | 370 | 80.2 | Minus |
| 3L | 28110227 | 3L | 13974583..13974765 | 20..202 | 345 | 79.2 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:44:50 has no hits.
BO13207.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:57:53 Download gff for
BO13207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp68-PA | 1..669 | 17..685 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:41:36 Download gff for
BO13207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5436-PA | 1..669 | 17..685 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:42:08 Download gff for
BO13207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp68-RA | 198..875 | 7..685 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:16:58 Download gff for
BO13207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp68-RA | 198..875 | 7..685 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:16:58 Download gff for
BO13207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24056436..24057113 | 7..685 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:42:08 Download gff for
BO13207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19882158..19882835 | 7..685 | 99 | | Minus |
BO13207.complete Sequence
1939 bp assembled on 2008-08-14
GenBank Submission: FJ632716
> BO13207.complete
GAAGTTATCAGTCGACATGCCAGCCATTGGAATCGATTTGGGCACCACAT
ACTCCTGCGTGGGAGTCTTCCAGTACGGAAAAGTGGAGATCATTGCCAAC
GACCAGGGTAACCGTACCACACCATCGTACGTGGCCTTCACCGACTCGGA
ACGCCTTATTGGAGATGCCGCCAAGAACCAGGTGGCCATGAACCCCAAGA
ACTCTGTGTTCGATGCCAAACGCCTGATTGGGCGTCGTTTCGACGATTCC
AAGATCCAGGAGGACATTAAGCACTGGCCGTTCAAAGTGATCAACGACAA
CGGCAAACCAAAGATAAGCGTGGAGTTCAAGGGCGCGAATAAGTGCTTCT
CTCCCGAGGAGATTAGCTCGATGGTACTCACCAAAATGAAGGAGACTGCA
GAAGCCTACCTGGGCACTACAGTGAAGGACGCTGTCATCACAGTGCCGGC
CTACTTCAACGACTCCCAGCGCCAGGCAACAAAGGATGCTGGTGCCATCG
CTGGCATCAATGTGCTCCGCATCATCAACGAGCCAACAGCGGCGGCTCTG
GCCTACGGCCTGGACAAGAATCTGAAGGGAGAGCGCAATGTGCTGATTTT
CGATTTGGGCGGTGGTACTTTTGACGTCTCCATCTTGACCATTGACGAGG
GATCCCTGTTTGAGGTGCGCTCGACTGCGGGAGACACACATCTGGGTGGC
GAGGACTTCGACAACCGATTGGTTAACCACTTTGCCGAGGAGTTTAAGCG
CAAGTACAAAAAGGATCTGCGCTCCAACCCACGCGCACTGCGTCGTCTTC
GCACGGCAGCCGAGCGCGCAAAGCGCACCCTTTCCTCCAGCACGGAGGCT
TCTTTGGAGATTGACGCCCTGTACGAGGGACACGACTTCTACTCGAAGGT
GAGCCGCGCCAGATTCGAGGAACTTTGCGGTGACCTCTTCCGCAACACAC
TGGAGCCAGTTGAGAAGGCACTCAAGGACGCTAAAATGGACAAGAGCCAG
ATCCATGACATAGTCCTGGTTGGAGGCTCCACTCGTATTCCCAAGGTTCA
GAACCTGCTGCAGAACTTCTTCGGCGGAAAGACCCTGAACTTGTCAATCA
ATCCGGACGAGGCGGTGGCCTACGGAGCAGCCATCCAGGCAGCCATTCTG
TCGGGCGACAAGAGCAGCGAGATCAAGGATGTCCTACTGGTCGATGTTGC
CCCACTCTCGTTGGGCATAGAAACCGCCGGCGGGGTGATGACCAAGCTGA
TTGAGCGCAACAGCCGCATTCCATGCAAGCAGTCCAAGACCTTCACCACC
TATGCCGACAACCAGCCGGCGGTGACCATTCAAGTGTTTGAGGGCGAGAG
GGCTCTGACCAAGGACAACAATGTATTGGGCACATTCGATCTCACTGGCG
TTCCACCCGCACCCCGTGGAGTGCCCAAGATCGACGTTACTTTCGATTTG
GACGCAAACGGTATCCTGAATGTGACCGCCAAGGAGCAGGGCACTGGCAA
CGCCAAGAACATTACCATCAAGAACGACAAGGGTCGTCTGTCGCAGGCGG
ACATCGACCGCATGCTCAGTGAGGCGGAGAAGTACGCCGAGGAGGACGAG
CGCCATCGCCAGCGGATCGCCGCCCGCAATCAACTGGAGACCTATTTGTT
TGGTGTAAAGGAGGCGGCCGAGAATGGTGGCGATCGCATCAGTGCAGCCG
ACAAGAGCAGTATTGTGGAGCGTTGCAGCGAGGCGATGAAGTGGTTGGAC
AGCAACACCACCGCCGAGAAGGAGGAGTACGAGTACAAACTGAAGGAACT
GGAACAGTTCTGCAGCCCCATCATGACCAAGATGCACAAGGGAGGTGGAG
ATGGCCAGCAGGCTCCAAACTTTGGACAGCAAGCTGGCGGTTATAAGGGT
CCCACCGTCGAGGAGGTGGACGCAAGCTTTCTAGACCAT
BO13207.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:05:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp68-RA | 1908 | CG5436-PA | 1..1905 | 17..1921 | 9525 | 100 | Plus |
| Hsp70Ab-RA | 1929 | CG18743-PA | 1..1598 | 17..1614 | 3235 | 80.2 | Plus |
| Hsp70Aa-RA | 1929 | CG31366-PA | 1..1598 | 17..1614 | 3235 | 80.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:05:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp68-RA | 2231 | CG5436-RA | 207..2111 | 17..1921 | 9525 | 100 | Plus |
| Hsp70Ab-RA | 2375 | CG18743-RA | 255..1852 | 17..1614 | 3235 | 80.2 | Plus |
| Hsp70Aa-RA | 2382 | CG31366-RA | 256..1853 | 17..1614 | 3235 | 80.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:05:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24055200..24057104 | 1921..17 | 9525 | 100 | Minus |
| 3R | 32079331 | 3R | 11954692..11956289 | 1614..17 | 3235 | 80.2 | Minus |
| 3R | 32079331 | 3R | 11958789..11960386 | 17..1614 | 3235 | 80.2 | Plus |
| 3R | 32079331 | 3R | 12506035..12507632 | 17..1614 | 3145 | 79.8 | Plus |
| 3R | 32079331 | 3R | 12502752..12504349 | 17..1614 | 3130 | 79.7 | Plus |
| 3R | 32079331 | 3R | 12509318..12510915 | 17..1614 | 3130 | 79.7 | Plus |
| 3R | 32079331 | 3R | 12465960..12467557 | 1614..17 | 3100 | 79.6 | Minus |
| 3R | 32079331 | 3R | 15244379..15245934 | 27..1585 | 1940 | 75.1 | Plus |
| 3R | 32079331 | 3R | 13045581..13046988 | 178..1585 | 1640 | 74.4 | Plus |
| 3L | 28110227 | 3L | 13975916..13977280 | 212..1579 | 805 | 70.8 | Plus |
| 3R | 32079331 | 3R | 13044970..13045131 | 23..184 | 375 | 82.1 | Plus |
| X | 23542271 | X | 11802928..11803573 | 1597..946 | 375 | 70.9 | Minus |
| 2R | 25286936 | 2R | 14254844..14255025 | 567..386 | 370 | 80.2 | Minus |
| 3L | 28110227 | 3L | 13974583..13974765 | 20..202 | 345 | 79.2 | Plus |
| X | 23542271 | X | 11803874..11804160 | 642..353 | 335 | 75.2 | Minus |
| 3R | 32079331 | 3R | 12465735..12465829 | 1836..1742 | 205 | 81.1 | Minus |
| 2R | 25286936 | 2R | 14253752..14253851 | 1500..1401 | 200 | 80 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:05:26 has no hits.
BO13207.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:07:25 Download gff for
BO13207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp68-RA | 195..2113 | 7..1929 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:17:32 Download gff for
BO13207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp68-RA | 207..2111 | 17..1923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:19:18 Download gff for
BO13207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp68-RA | 204..2108 | 17..1923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:26:06 Download gff for
BO13207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp68-RA | 207..2111 | 17..1923 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:26:06 Download gff for
BO13207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24055198..24057104 | 17..1923 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:17:32 Download gff for
BO13207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19880920..19882826 | 17..1923 | 99 | | Minus |
BO13207.pep Sequence
Translation from 16 to 1939
> BO13207.pep
MPAIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGD
AAKNQVAMNPKNSVFDAKRLIGRRFDDSKIQEDIKHWPFKVINDNGKPKI
SVEFKGANKCFSPEEISSMVLTKMKETAEAYLGTTVKDAVITVPAYFNDS
QRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGG
TFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKD
LRSNPRALRRLRTAAERAKRTLSSSTEASLEIDALYEGHDFYSKVSRARF
EELCGDLFRNTLEPVEKALKDAKMDKSQIHDIVLVGGSTRIPKVQNLLQN
FFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSSEIKDVLLVDVAPLSLG
IETAGGVMTKLIERNSRIPCKQSKTFTTYADNQPAVTIQVFEGERALTKD
NNVLGTFDLTGVPPAPRGVPKIDVTFDLDANGILNVTAKEQGTGNAKNIT
IKNDKGRLSQADIDRMLSEAEKYAEEDERHRQRIAARNQLETYLFGVKEA
AENGGDRISAADKSSIVERCSEAMKWLDSNTTAEKEEYEYKLKELEQFCS
PIMTKMHKGGGDGQQAPNFGQQAGGYKGPTVEEVDASFLDH
BO13207.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 03:02:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp68-PA | 635 | CG5436-PA | 1..635 | 1..635 | 3242 | 100 | Plus |
| Hsp70Ab-PA | 642 | CG18743-PA | 1..642 | 1..635 | 2731 | 81.9 | Plus |
| Hsp70Aa-PA | 642 | CG31366-PA | 1..642 | 1..635 | 2731 | 81.9 | Plus |
| Hsp70Bc-PA | 641 | CG6489-PA | 1..641 | 1..635 | 2724 | 81.7 | Plus |
| Hsp70Bb-PA | 641 | CG31359-PA | 1..641 | 1..635 | 2724 | 81.7 | Plus |
