Clone Sequence Records
BO13233.3prime Sequence
455 bp (454 high quality bases) assembled on 2006-05-08
> BO13233.3prime
ATGGTCTAGAAAGCTTGCAAGAAGAACAGGAGCTGATGGCAAGGCACTGT
ATGCCAAAGGCGAGGTGTAAGCCAAGGAGGAAATGTGGGCCAATGGAGCA
GCAGCGTACTTGGCCACAACAGGAGCAGCCAATGGAGCAGCAGCGTACTT
GGCCACCACAGGAGCGGCCAATGGAGCAGCAGCGTACTTGGCCACCACAG
GAGCGGCAACGGGAGCAATCACAGGAGCAGCGGCGATTCCATTGTAGTTC
CTGGCGATAACCTGGCTACTGGTGGCGGTCACAACTGGAGCGGGAGCAGC
TACCACGGCAGCAGGAGCTGAGTAAGCCAGAGGAGCAGAGTAAGCCAGAG
GAGCAGTGTAAGCAAGGGGAGCACCCAGAAGTCCAGGCTTGGCAGCAGCG
CAGGCAACGATAGCCAGAATAACAACGGCGGATTTGAACATGTCGACTGA
TAACT
BO13233.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:00:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18294-PA | 426 | CG18294-RA | 1..423 | 441..19 | 2115 | 100 | Minus |
CG12519-PA | 396 | CG12519-RA | 1..299 | 441..143 | 1445 | 99.3 | Minus |
CG14096-PA | 369 | CG14096-RA | 1..269 | 441..173 | 1295 | 99.2 | Minus |
CG32213-PA | 465 | CG32213-RA | 154..300 | 345..199 | 585 | 95.9 | Minus |
CG32208-PA | 465 | 825-Oak-RA | 154..300 | 345..199 | 585 | 95.9 | Minus |
CG32214-PA | 426 | CG32214-RA | 154..300 | 345..199 | 585 | 95.9 | Minus |
CG33255-PA | 768 | CG33255-RA | 229..387 | 405..247 | 570 | 94.3 | Minus |
CG32213-PA | 465 | CG32213-RA | 107..186 | 410..331 | 375 | 98.7 | Minus |
CG32208-PA | 465 | 825-Oak-RA | 107..186 | 410..331 | 375 | 98.7 | Minus |
CG32214-PA | 426 | CG32214-RA | 107..186 | 410..331 | 375 | 98.7 | Minus |
CG12519-PA | 396 | CG12519-RA | 235..299 | 168..104 | 275 | 96.9 | Minus |
CG33255-PA | 768 | CG33255-RA | 566..645 | 299..220 | 250 | 92.5 | Minus |
CG32212-PA | 336 | CG32212-RA | 174..258 | 259..175 | 225 | 90.5 | Minus |
CG12519-PA | 396 | CG12519-RA | 238..275 | 126..89 | 165 | 97.3 | Minus |
CG14096-PA | 369 | CG14096-RA | 235..269 | 168..134 | 150 | 97.1 | Minus |
CG33255-PA | 768 | CG33255-RA | 637..666 | 204..175 | 150 | 100 | Minus |
CG33255-PA | 768 | CG33255-RA | 637..666 | 165..136 | 150 | 100 | Minus |
CG32212-PA | 336 | CG32212-RA | 64..113 | 378..329 | 150 | 92 | Minus |
CG33255-PA | 768 | CG33255-RA | 140..172 | 275..307 | 140 | 96.9 | Plus |
CG33255-PA | 768 | CG33255-RA | 634..666 | 129..97 | 140 | 96.9 | Minus |
CG32213-PA | 465 | CG32213-RA | 291..368 | 181..104 | 140 | 87.1 | Minus |
CG32208-PA | 465 | 825-Oak-RA | 291..368 | 181..104 | 140 | 87.1 | Minus |
CG32213-PA | 465 | CG32213-RA | 307..368 | 204..143 | 135 | 88.7 | Minus |
CG32208-PA | 465 | 825-Oak-RA | 307..368 | 204..143 | 135 | 88.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:53:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18294-RA | 507 | CG18294-RA | 55..477 | 441..19 | 2115 | 100 | Minus |
CG12519-RB | 600 | CG12519-RB | 53..360 | 441..134 | 1480 | 98.7 | Minus |
CG12519-RA | 507 | CG12519-RA | 53..360 | 441..134 | 1480 | 98.7 | Minus |
CG18294-RA | 507 | CG18294-RA | 279..368 | 178..89 | 375 | 94.4 | Minus |
CG18294-RA | 507 | CG18294-RA | 318..407 | 217..128 | 375 | 94.4 | Minus |
CG12519-RB | 600 | CG12519-RB | 277..360 | 178..95 | 315 | 91.7 | Minus |
CG18294-RA | 507 | CG18294-RA | 279..330 | 139..88 | 185 | 90.4 | Minus |
CG18294-RA | 507 | CG18294-RA | 357..408 | 217..166 | 185 | 90.4 | Minus |
CG12519-RB | 600 | CG12519-RB | 277..327 | 139..89 | 180 | 90.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:53:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19475047..19475457 | 19..429 | 2055 | 100 | Plus |
3L | 28110227 | 3L | 19472610..19472905 | 429..134 | 1420 | 98.6 | Minus |
3L | 28110227 | 3L | 19466699..19466962 | 166..429 | 1260 | 98.5 | Plus |
3L | 28110227 | 3L | 19471808..19472096 | 125..419 | 745 | 84.4 | Plus |
3L | 28110227 | 3L | 19475971..19476259 | 419..125 | 745 | 84.4 | Minus |
3L | 28110227 | 3L | 19478373..19478568 | 409..214 | 740 | 91.8 | Minus |
3L | 28110227 | 3L | 19423849..19424044 | 409..214 | 725 | 91.3 | Minus |
3L | 28110227 | 3L | 19467481..19467687 | 419..195 | 700 | 88.4 | Minus |
3L | 28110227 | 3L | 19488045..19488279 | 409..166 | 615 | 84.4 | Minus |
3L | 28110227 | 3L | 19475117..19475206 | 128..217 | 375 | 94.4 | Plus |
3L | 28110227 | 3L | 19475156..19475245 | 89..178 | 375 | 94.4 | Plus |
3L | 28110227 | 3L | 19423125..19423224 | 212..311 | 320 | 88 | Plus |
3L | 28110227 | 3L | 19472822..19472905 | 178..95 | 315 | 91.7 | Minus |
3L | 28110227 | 3L | 19424757..19424836 | 299..220 | 310 | 92.5 | Minus |
3L | 28110227 | 3L | 19471817..19471903 | 95..181 | 255 | 86.2 | Plus |
3L | 28110227 | 3L | 19476164..19476250 | 181..95 | 255 | 86.2 | Minus |
3L | 28110227 | 3L | 19464433..19464518 | 215..300 | 220 | 83.7 | Plus |
3L | 28110227 | 3L | 19475116..19475167 | 166..217 | 185 | 90.4 | Plus |
3L | 28110227 | 3L | 19475194..19475245 | 88..139 | 185 | 90.4 | Plus |
3L | 28110227 | 3L | 19472822..19472872 | 139..89 | 180 | 90.2 | Minus |
Blast to na_te.dros performed 2015-02-10 16:53:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2777..2849 | 281..356 | 147 | 69.7 | Plus |
BO13233.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:58:33 Download gff for
BO13233.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18294-PA | 1..426 | 18..441 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:42:34 Download gff for
BO13233.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18294-PA | 1..426 | 18..441 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 23:18:43 Download gff for
BO13233.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18294-RA | 49..488 | 10..451 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:51:12 Download gff for
BO13233.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18294-RA | 49..488 | 10..451 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:51:12 Download gff for
BO13233.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19475036..19475457 | 10..429 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 23:18:43 Download gff for
BO13233.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19468136..19468557 | 10..429 | 99 | <- | Plus |
BO13233.5prime Sequence
455 bp (454 high quality bases) assembled on 2006-05-08
> BO13233.5prime
GAAGTTATCACTCGACATGTTCAAATCCGCCGTTGTTATTCTGGCTATCG
TTGCCTGCGCTGCTGCCAAGCCTGGACTTCTGGGTGCTCCCCTTGCTTAC
ACTGCTCCTCTGGCTTACTCTGCTCCTCTGGCTTACTCAGCTCCTGCTGC
CGTGGTAGCTGCTCCCGCTCCAGTTGTGACCGCCACCAGTAGCCAGGTTA
TCGCCAGGAACTACAATGGAATCGCCGCTGCTCCTGTGATTGCTCCCGTT
GCCGCTCCTGTGGTGGCCAAGTACGCTGCTGCTCCATTGGCCGCTCCTGT
GGTGGCCAAGTACGCTGCTGCTCCATTGGCTGCTCCTGTTGTGGCCAAGT
ACGCTGCTGCTCCATTGGCCCACATTTCCTCCTTGGCTTACACCTCGCCT
TTGGCATACAGTGCCTTGCCATCAGCTCCTGTTCTTCTTGCAAGCTTTCT
AGACC
BO13233.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:00:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18294-PA | 426 | CG18294-RA | 1..423 | 17..439 | 2115 | 100 | Plus |
CG12519-PA | 396 | CG12519-RA | 1..299 | 17..315 | 1445 | 99.3 | Plus |
CG14096-PA | 369 | CG14096-RA | 1..269 | 17..285 | 1295 | 99.2 | Plus |
CG32213-PA | 465 | CG32213-RA | 154..300 | 113..259 | 585 | 95.9 | Plus |
CG32208-PA | 465 | 825-Oak-RA | 154..300 | 113..259 | 585 | 95.9 | Plus |
CG32214-PA | 426 | CG32214-RA | 154..300 | 113..259 | 585 | 95.9 | Plus |
CG33255-PA | 768 | CG33255-RA | 229..387 | 53..211 | 570 | 94.3 | Plus |
CG32213-PA | 465 | CG32213-RA | 107..186 | 48..127 | 375 | 98.7 | Plus |
CG32208-PA | 465 | 825-Oak-RA | 107..186 | 48..127 | 375 | 98.7 | Plus |
CG32214-PA | 426 | CG32214-RA | 107..186 | 48..127 | 375 | 98.7 | Plus |
CG12519-PA | 396 | CG12519-RA | 235..299 | 290..354 | 275 | 96.9 | Plus |
CG33255-PA | 768 | CG33255-RA | 566..645 | 159..238 | 250 | 92.5 | Plus |
CG32212-PA | 336 | CG32212-RA | 174..258 | 199..283 | 225 | 90.5 | Plus |
CG12519-PA | 396 | CG12519-RA | 238..275 | 332..369 | 165 | 97.3 | Plus |
CG14096-PA | 369 | CG14096-RA | 235..269 | 290..324 | 150 | 97.1 | Plus |
CG33255-PA | 768 | CG33255-RA | 637..666 | 254..283 | 150 | 100 | Plus |
CG33255-PA | 768 | CG33255-RA | 637..666 | 293..322 | 150 | 100 | Plus |
CG32212-PA | 336 | CG32212-RA | 64..113 | 80..129 | 150 | 92 | Plus |
CG33255-PA | 768 | CG33255-RA | 634..666 | 329..361 | 140 | 96.9 | Plus |
CG33255-PA | 768 | CG33255-RA | 140..172 | 183..151 | 140 | 96.9 | Minus |
CG32213-PA | 465 | CG32213-RA | 291..368 | 277..354 | 140 | 87.1 | Plus |
CG32208-PA | 465 | 825-Oak-RA | 291..368 | 277..354 | 140 | 87.1 | Plus |
CG32213-PA | 465 | CG32213-RA | 307..368 | 254..315 | 135 | 88.7 | Plus |
CG32208-PA | 465 | 825-Oak-RA | 307..368 | 254..315 | 135 | 88.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:30:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18294-RA | 507 | CG18294-RA | 55..477 | 17..439 | 2115 | 100 | Plus |
CG12519-RB | 600 | CG12519-RB | 53..360 | 17..324 | 1480 | 98.7 | Plus |
CG12519-RA | 507 | CG12519-RA | 53..360 | 17..324 | 1480 | 98.7 | Plus |
CG18294-RA | 507 | CG18294-RA | 279..368 | 280..369 | 375 | 94.4 | Plus |
CG18294-RA | 507 | CG18294-RA | 318..407 | 241..330 | 375 | 94.4 | Plus |
CG12519-RB | 600 | CG12519-RB | 277..360 | 280..363 | 315 | 91.7 | Plus |
CG18294-RA | 507 | CG18294-RA | 279..330 | 319..370 | 185 | 90.4 | Plus |
CG18294-RA | 507 | CG18294-RA | 357..408 | 241..292 | 185 | 90.4 | Plus |
CG12519-RB | 600 | CG12519-RB | 277..327 | 319..369 | 180 | 90.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:30:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19475047..19475457 | 439..29 | 2055 | 100 | Minus |
3L | 28110227 | 3L | 19472610..19472905 | 29..324 | 1420 | 98.6 | Plus |
3L | 28110227 | 3L | 19466699..19466962 | 292..29 | 1260 | 98.5 | Minus |
3L | 28110227 | 3L | 19471808..19472096 | 333..39 | 745 | 84.4 | Minus |
3L | 28110227 | 3L | 19475971..19476259 | 39..333 | 745 | 84.4 | Plus |
3L | 28110227 | 3L | 19478373..19478568 | 49..244 | 740 | 91.8 | Plus |
3L | 28110227 | 3L | 19423849..19424044 | 49..244 | 725 | 91.3 | Plus |
3L | 28110227 | 3L | 19467481..19467687 | 39..263 | 700 | 88.4 | Plus |
3L | 28110227 | 3L | 19488045..19488279 | 49..292 | 615 | 84.4 | Plus |
3L | 28110227 | 3L | 19475117..19475206 | 330..241 | 375 | 94.4 | Minus |
3L | 28110227 | 3L | 19475156..19475245 | 369..280 | 375 | 94.4 | Minus |
3L | 28110227 | 3L | 19423125..19423224 | 246..147 | 320 | 88 | Minus |
3L | 28110227 | 3L | 19472822..19472905 | 280..363 | 315 | 91.7 | Plus |
3L | 28110227 | 3L | 19424757..19424836 | 159..238 | 310 | 92.5 | Plus |
3L | 28110227 | 3L | 19471817..19471903 | 363..277 | 255 | 86.2 | Minus |
3L | 28110227 | 3L | 19476164..19476250 | 277..363 | 255 | 86.2 | Plus |
3L | 28110227 | 3L | 19464433..19464518 | 243..158 | 220 | 83.7 | Minus |
3L | 28110227 | 3L | 19475116..19475167 | 292..241 | 185 | 90.4 | Minus |
3L | 28110227 | 3L | 19475194..19475245 | 370..319 | 185 | 90.4 | Minus |
3L | 28110227 | 3L | 19472822..19472872 | 319..369 | 180 | 90.2 | Plus |
Blast to na_te.dros performed 2015-02-13 08:30:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2777..2849 | 177..102 | 147 | 69.7 | Minus |
BO13233.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 05:58:34 Download gff for
BO13233.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18294-PA | 1..426 | 17..440 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:42:36 Download gff for
BO13233.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18294-PA | 1..426 | 17..440 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:37:09 Download gff for
BO13233.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18294-RA | 49..488 | 7..448 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:15:43 Download gff for
BO13233.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18294-RA | 49..488 | 7..448 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:15:43 Download gff for
BO13233.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19475036..19475457 | 29..448 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:37:09 Download gff for
BO13233.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19468136..19468557 | 29..448 | 99 | <- | Minus |
BO13233.complete Sequence
457 bp assembled on 2006-10-11
GenBank Submission: FJ632728
> BO13233.complete
GAAGTTATCAGTCGACATGTTCAAATCCGCCGTTGTTATTCTGGCTATCG
TTGCCTGCGCTGCTGCCAAGCCTGGACTTCTGGGTGCTCCCCTTGCTTAC
ACTGCTCCTCTGGCTTACTCTGCTCCTCTGGCTTACTCAGCTCCTGCTGC
CGTGGTAGCTGCTCCCGCTCCAGTTGTGACCGCCACCAGTAGCCAGGTTA
TCGCCAGGAACTACAATGGAATCGCCGCTGCTCCTGTGATTGCTCCCGTT
GCCGCTCCTGTGGTGGCCAAGTACGCTGCTGCTCCATTGGCCGCTCCTGT
GGTGGCCAAGTACGCTGCTGCTCCATTGGCTGCTCCTGTTGTGGCCAAGT
ACGCTGCTGCTCCATTGGCCCACATTTCCTCCTTGGCTTACACCTCGCCT
TTGGCATACAGTGCCTTGCCATCAGCTCCTGTTCTTCTTGCAAGCTTTCT
AGACCAT
BO13233.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:19:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18294-RA | 426 | CG18294-PA | 1..423 | 17..439 | 2115 | 100 | Plus |
CG12519-RB | 396 | CG12519-PB | 1..308 | 17..324 | 1480 | 98.7 | Plus |
CG12519-RA | 396 | CG12519-PA | 1..308 | 17..324 | 1480 | 98.7 | Plus |
CG18294-RA | 426 | CG18294-PA | 225..314 | 280..369 | 375 | 94.4 | Plus |
CG18294-RA | 426 | CG18294-PA | 264..353 | 241..330 | 375 | 94.4 | Plus |
CG12519-RB | 396 | CG12519-PB | 225..308 | 280..363 | 315 | 91.7 | Plus |
CG18294-RA | 426 | CG18294-PA | 225..276 | 319..370 | 185 | 90.4 | Plus |
CG18294-RA | 426 | CG18294-PA | 303..354 | 241..292 | 185 | 90.4 | Plus |
CG12519-RB | 396 | CG12519-PB | 225..275 | 319..369 | 180 | 90.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:19:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18294-RA | 507 | CG18294-RA | 55..477 | 17..439 | 2115 | 100 | Plus |
CG12519-RB | 600 | CG12519-RB | 53..360 | 17..324 | 1480 | 98.7 | Plus |
CG12519-RA | 507 | CG12519-RA | 53..360 | 17..324 | 1480 | 98.7 | Plus |
CG18294-RA | 507 | CG18294-RA | 318..407 | 241..330 | 375 | 94.4 | Plus |
CG18294-RA | 507 | CG18294-RA | 279..368 | 280..369 | 375 | 94.4 | Plus |
CG12519-RB | 600 | CG12519-RB | 277..360 | 280..363 | 315 | 91.7 | Plus |
CG18294-RA | 507 | CG18294-RA | 357..408 | 241..292 | 185 | 90.4 | Plus |
CG18294-RA | 507 | CG18294-RA | 279..330 | 319..370 | 185 | 90.4 | Plus |
CG12519-RB | 600 | CG12519-RB | 277..327 | 319..369 | 180 | 90.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:19:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19475047..19475457 | 439..29 | 2055 | 100 | Minus |
3L | 28110227 | 3L | 19472610..19472905 | 29..324 | 1420 | 98.6 | Plus |
3L | 28110227 | 3L | 19466699..19466962 | 292..29 | 1260 | 98.5 | Minus |
3L | 28110227 | 3L | 19471808..19472096 | 333..39 | 745 | 84.4 | Minus |
3L | 28110227 | 3L | 19475971..19476259 | 39..333 | 745 | 84.4 | Plus |
3L | 28110227 | 3L | 19478373..19478568 | 49..244 | 740 | 91.8 | Plus |
3L | 28110227 | 3L | 19423849..19424044 | 49..244 | 725 | 91.3 | Plus |
3L | 28110227 | 3L | 19467481..19467687 | 39..263 | 700 | 88.4 | Plus |
3L | 28110227 | 3L | 19488045..19488279 | 49..292 | 615 | 84.4 | Plus |
3L | 28110227 | 3L | 19475117..19475206 | 330..241 | 375 | 94.4 | Minus |
3L | 28110227 | 3L | 19475156..19475245 | 369..280 | 375 | 94.4 | Minus |
3L | 28110227 | 3L | 19423125..19423224 | 246..147 | 320 | 88 | Minus |
3L | 28110227 | 3L | 19472822..19472905 | 280..363 | 315 | 91.7 | Plus |
3L | 28110227 | 3L | 19424757..19424836 | 159..238 | 310 | 92.5 | Plus |
3L | 28110227 | 3L | 19471817..19471903 | 363..277 | 255 | 86.2 | Minus |
3L | 28110227 | 3L | 19476164..19476250 | 277..363 | 255 | 86.2 | Plus |
3L | 28110227 | 3L | 19464433..19464518 | 243..158 | 220 | 83.7 | Minus |
3L | 28110227 | 3L | 19475116..19475167 | 292..241 | 185 | 90.4 | Minus |
3L | 28110227 | 3L | 19475194..19475245 | 370..319 | 185 | 90.4 | Minus |
3L | 28110227 | 3L | 19472822..19472872 | 319..369 | 180 | 90.2 | Plus |
Blast to na_te.dros performed 2014-11-27 07:19:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2777..2849 | 177..102 | 147 | 69.7 | Minus |
BO13233.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:47:57 Download gff for
BO13233.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18294-RA | 1..426 | 17..440 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:02:33 Download gff for
BO13233.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18294-RA | 45..484 | 7..448 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:11:56 Download gff for
BO13233.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18294-RA | 60..477 | 22..441 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:47:57 Download gff for
BO13233.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18294-RA | 45..484 | 7..448 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:08:13 Download gff for
BO13233.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18294-RA | 60..477 | 22..441 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:08:13 Download gff for
BO13233.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19475045..19475457 | 29..441 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:11:56 Download gff for
BO13233.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19468145..19468557 | 29..441 | 99 | | Minus |
BO13233.pep Sequence
Translation from 16 to 457
> BO13233.pep
MFKSAVVILAIVACAAAKPGLLGAPLAYTAPLAYSAPLAYSAPAAVVAAP
APVVTATSSQVIARNYNGIAAAPVIAPVAAPVVAKYAAAPLAAPVVAKYA
AAPLAAPVVAKYAAAPLAHISSLAYTSPLAYSALPSAPVLLASFLDH
BO13233.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:53:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18294-PA | 141 | CG18294-PA | 1..141 | 1..141 | 678 | 100 | Plus |
CG12519-PB | 131 | CG12519-PB | 1..131 | 1..141 | 560 | 85.8 | Plus |
CG12519-PA | 131 | CG12519-PA | 1..131 | 1..141 | 560 | 85.8 | Plus |
CG14096-PA | 122 | CG14096-PA | 1..122 | 1..141 | 486 | 76.8 | Plus |
825-Oak-PB | 129 | CG32208-PB | 1..128 | 1..145 | 480 | 77.2 | Plus |