Clone Sequence Records
BO13295.5prime Sequence
726 bp (644 high quality bases) assembled on 2006-05-08
> BO13295.5prime
GAAGTTATCAGTCGACATGCGCCGCCTTCAAACGAGCCTTTATCGACTGC
TCCGTGCTCACCACACATCCAGCAGAATGCAGCACCAAGCGAGCGAGCTG
AGGACTCCAGTGTGCGCGGTGGGCGACGAGGCTGCTCTCCAGTTGGCCCG
CCAGTGCCTGCTTGGTGGCCAAGTGATTGCCCTGCCCACCGATACCGTGT
ATGGCCTGGCCTGCGATGCCAACAACGAGACAGCCATACAGCAGCTCTAC
GAGATTAAGGGTCGCGATGAACACAAGCCCGTGGCCATCTGCGTTCACAA
CATCGATGCGTTGCGACGCTTTGGTCAGGCTGCCCATCTCAGCGACGAGC
TGCTAACTCGTTTGCTCCCGGGCCCCCTGACCATCGTGATCGAGCGGACG
TCCCAGCTGAGCAACCGTTTCCTTAATCCCAGCACCTCCAAAATCGGCAT
ACGCATTCCGGACTTCAACTTCATGCGCGACCTGTGCGCCGTGTGGCAGG
AGAAGCCCCTGGCCCTGACCAGCGCCAATCGCTCCAGTGCGCCCAGCAGT
CTGCAGGTGTCCGAGTTCCGTTCCCTATGGCCCCAATTGGGCGCCGTCTT
CGATGCCGGTCGAATCGGTCTGACCGAGGAGCGACGACTGGCCTCCACGG
TCATTGACCTGGCCACTCCTGGCTACTATGAAATAGTGCGCGCCGGCGTG
GCTCTCAAGCCGACACTCAGCCTCAT
BO13295.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:01:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33786-PA | 747 | CG33786-RA | 1..710 | 17..726 | 3550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:17:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33785-RA | 1245 | CG33785-RA | 388..1097 | 17..726 | 3550 | 100 | Plus |
CG33786-RA | 1245 | CG33786-RA | 388..1097 | 17..726 | 3550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:17:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20642614..20643323 | 726..17 | 3550 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 08:17:42 has no hits.
BO13295.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:00:03 Download gff for
BO13295.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33786-PA | 1..710 | 17..726 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:44:35 Download gff for
BO13295.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33786-PA | 1..710 | 17..726 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:36:22 Download gff for
BO13295.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33785-RA | 382..1097 | 10..726 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:20:19 Download gff for
BO13295.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33786-RA | 382..1097 | 10..726 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:20:19 Download gff for
BO13295.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20642614..20643329 | 10..726 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:36:22 Download gff for
BO13295.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16530119..16530834 | 10..726 | 99 | | Minus |
BO13295.complete Sequence
778 bp assembled on 2008-01-17
GenBank Submission: FJ632751
> BO13295.complete
GAAGTTATCAGTCGACATGCGCCGCCTTCAAACGAGCCTTTATCGACTGC
TCCGTGCTCACCACACATCCAGCAGAATGCAGCACCAAGCGAGCGAGCTG
AGGACTCCAGTGTGCGCGGTGGGCGACGAGGCTGCTCTCCAGTTGGCCCG
CCAGTGCCTGCTTGGTGGCCAAGTGATTGCCCTGCCCACCGATACCGTGT
ATGGCCTGGCCTGCGATGCCAACAACGAGACAGCCATACAGCAGCTCTAC
GAGATTAAGGGTCGCGATGAACACAAGCCCGTGGCCATCTGCGTTCACAA
CATCGATGCGTTGCGACGCTTTGGTCAGGCTGCCCATCTCAGCGACGAGC
TGCTAACTCGTTTGCTCCCGGGCCCCCTGACCATCGTGATCGAGCGGACG
TCCCAGCTGAGCAACCGTTTCCTTAATCCCAGCACCTCCAAAATCGGCAT
ACGCATTCCGGACTTCAACTTCATGCGCGACCTGTGCGCCGTGTGGCAGG
AGAAGCCCCTGGCCCTGACCAGCGCCAATCGCTCCAGTGCGCCCAGCAGT
CTGCAGGTGTCCGAGTTCCGTTCCCTATGGCCCCAATTGGGCGCCGTCTT
CGATGCCGGTCGAATCGGTCTGACCGAGGAGCGACGACTGGCCTCCACGG
TCATTGACCTGGCCACTCCTGGCTACTATGAAATAGTGCGCGCCGGCGTG
GCTCTCAAGCCGACACTCAGCCTCATGGAGGAGTTCGGCATTCGGGAGCT
AAAAATGATGGCAAGCTTTCTAGACCAT
BO13295.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:01:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33786-RA | 747 | CG33786-PA | 1..744 | 17..760 | 3720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:02:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33785-RA | 1245 | CG33785-RA | 388..1131 | 17..760 | 3720 | 100 | Plus |
CG33786-RA | 1245 | CG33786-RA | 388..1131 | 17..760 | 3720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:01:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20642580..20643323 | 760..17 | 3720 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:01:58 has no hits.
BO13295.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:01:50 Download gff for
BO13295.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33786-RA | 1..747 | 17..761 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:33:52 Download gff for
BO13295.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33785-RA | 383..1126 | 17..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:36:57 Download gff for
BO13295.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33785-RA | 388..1131 | 17..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:01:50 Download gff for
BO13295.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33785-RA | 377..1126 | 10..760 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:42:42 Download gff for
BO13295.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33786-RA | 388..1131 | 17..762 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:42:42 Download gff for
BO13295.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20642578..20643323 | 17..762 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:36:57 Download gff for
BO13295.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16530083..16530828 | 17..762 | 99 | | Minus |
BO13295.pep Sequence
Translation from 16 to 778
> BO13295.pep
MRRLQTSLYRLLRAHHTSSRMQHQASELRTPVCAVGDEAALQLARQCLLG
GQVIALPTDTVYGLACDANNETAIQQLYEIKGRDEHKPVAICVHNIDALR
RFGQAAHLSDELLTRLLPGPLTIVIERTSQLSNRFLNPSTSKIGIRIPDF
NFMRDLCAVWQEKPLALTSANRSSAPSSLQVSEFRSLWPQLGAVFDAGRI
GLTEERRLASTVIDLATPGYYEIVRAGVALKPTLSLMEEFGIRELKMMAS
FLDH
BO13295.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:22:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33786-PA | 248 | CG33786-PA | 1..248 | 1..248 | 1259 | 100 | Plus |