BO13382.complete Sequence
406 bp assembled on 2007-10-17
GenBank Submission: FJ632771
> BO13382.complete
GAAGTTATCAGTCGACATGACGGAAGCAGCGGAAATCAACGGCAGAGAAG
AAGTGGAGGATGACGAGCAGGATAAAAAGCAAAAGAAATCCGATGTGAAA
CGACATGACGACGGCGCCGCAGATTTGGAACGTGTGACGGATTATGCCGA
GGAAAAGGAGATCTCTGCGGACAATATATCCAGCGCCGTGGAGCAGTTTG
GCAACCAGCGTAACAAGGAGAACGAACTGCGAGTAGCCAAAGAGAAGGAG
CTCCAGAAGGTCCAAGTCAAGAAGGAGGACATTGAACTGATTATGAACGA
GCTGCTGGTTAGCAAGGCGCATGCCGAGAAAGTGCTCCGCGAGCAGAGCG
GCGATGTGGTGGCCGCCTTGGAAGCCATCATCAGCAATGCAAGCTTTCTA
GACCAT
BO13382.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:17:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9922-RB | 375 | CG9922-PB | 1..372 | 17..388 | 1860 | 100 | Plus |
CG9922-RA | 375 | CG9922-PA | 1..372 | 17..388 | 1860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:17:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9922-RB | 1006 | CG9922-RB | 470..841 | 17..388 | 1860 | 100 | Plus |
CG9922-RA | 626 | CG9922-RA | 90..461 | 17..388 | 1860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:16:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14035444..14035551 | 292..185 | 540 | 100 | Minus |
3R | 32079331 | 3R | 14035824..14035929 | 122..17 | 530 | 100 | Minus |
3R | 32079331 | 3R | 14035183..14035278 | 388..293 | 480 | 100 | Minus |
3R | 32079331 | 3R | 14035620..14035684 | 185..121 | 325 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:17:00 has no hits.
BO13382.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:01:52 Download gff for
BO13382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9922-RA | 1..375 | 17..391 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:14:52 Download gff for
BO13382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9922-RA | 228..608 | 9..388 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:44:59 Download gff for
BO13382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9922-RA | 90..461 | 17..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:46:37 Download gff for
BO13382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9922-RA | 237..608 | 17..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:47 Download gff for
BO13382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9922-RA | 90..461 | 17..390 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:49:47 Download gff for
BO13382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14035180..14035278 | 293..390 | 97 | <- | Minus |
3R | 14035444..14035551 | 185..292 | 100 | <- | Minus |
3R | 14035621..14035682 | 123..184 | 100 | <- | Minus |
3R | 14035824..14035929 | 17..122 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:44:59 Download gff for
BO13382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9861546..9861651 | 17..122 | 100 | | Minus |
arm_3R | 9860902..9861000 | 293..390 | 97 | <- | Minus |
arm_3R | 9861166..9861273 | 185..292 | 100 | <- | Minus |
arm_3R | 9861343..9861404 | 123..184 | 100 | <- | Minus |
BO13382.pep Sequence
Translation from 16 to 406
> BO13382.pep
MTEAAEINGREEVEDDEQDKKQKKSDVKRHDDGAADLERVTDYAEEKEIS
ADNISSAVEQFGNQRNKENELRVAKEKELQKVQVKKEDIELIMNELLVSK
AHAEKVLREQSGDVVAALEAIISNASFLDH
BO13382.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:34:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9922-PB | 124 | CG9922-PB | 1..124 | 1..124 | 605 | 100 | Plus |
CG9922-PA | 124 | CG9922-PA | 1..124 | 1..124 | 605 | 100 | Plus |