Clone Sequence Records
BO13402.3prime Sequence
788 bp (710 high quality bases) assembled on 2006-05-08
> BO13402.3prime
ATGGTCTAGAAAGCTTGCCAGATCTGTGGATATGGTGTGCGTGTGCCCGG
CTAGCAATTGGTAGGTGGTGTACATGGGCTCCTCCAGTGGTTCCTTCTCG
AAATCCACCTTGAACCTCTTGGCCGCACTCTCCATCTCCTCCAGGTCGCT
GAAGCCCGGAAAGCTGGTGGGGCAAAAGTGGCCGGCAATTGCCTCCGGAA
TGTGGGTGACATTGTGCAGCATGTGCGCTGGCGTGGATTGCAGATAGTTT
CTCCACTTCTGGTACGATGAGGGAGGCATCTGAGCATTATCCCTTCTTTG
GCAAATCGGCGACGAGGTCTTGGGCATAATGCGCTGCGCCTGCTGCATCA
TGTGCATCTCCCACTCCAGATTGCCCACCATTTGATCGGATTGTGTAGAG
TCTCGGGATGATGCACTCATGTCCTGCGTGCGCATAAGCACTCCCTCCAT
CTCCTCGTCATTCTCCTGGCCCTTTCTCGGCGATGAATTGGCGCTGCTGC
AGGTGTAGTAACCGCAGGATTTGTCCAGTTGTGGTTGCTCTGCGAAATCA
TCGCAAATCGGCTGGCTGGAGCGGCTCCAGATGCTGCGACTGGACGATGA
GGAGCTGCTGCTACCGCTGCTGCTACCGCTGCTGCTGCTGCCCACTCCGC
TGCTGTTGCGACTGCTGTACAAACGCTTCTGGGAGCGACTTGCCGATCCG
CCGGAGGCCACATAGATGCTGCTATTCAGGCTGCTCAGCTCCTTGAGCTT
CAGATTGCTTGCACAACAACCCATGTCGACTGATAACT
BO13402.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:03:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14427-PA | 759 | CG14427-RA | 1..756 | 774..19 | 3780 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 12:15:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14427-RA | 1167 | CG14427-RA | 87..843 | 775..19 | 3785 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 12:15:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7040689..7041445 | 775..19 | 3785 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-06 12:15:27 has no hits.
BO13402.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:02:15 Download gff for
BO13402.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14427-PA | 1..759 | 16..774 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:47:39 Download gff for
BO13402.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14427-PA | 1..759 | 16..774 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:58:47 Download gff for
BO13402.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14427-RA | 87..849 | 13..775 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:39:42 Download gff for
BO13402.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14427-RA | 87..849 | 13..775 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:39:42 Download gff for
BO13402.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7040689..7041451 | 13..775 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:58:47 Download gff for
BO13402.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6934722..6935484 | 13..775 | 99 | | Minus |
BO13402.5prime Sequence
788 bp (787 high quality bases) assembled on 2006-05-29
> BO13402.5prime
GAAGTTATCAGTCGACATGGGTTGTTGTGCAAGCAATCTGAAGCTCAAGG
AGCTGAGCAGCCTGAATAGCAGCATCTATGTGGCCTCCGGCGGATCGGCA
AGTCGCTCCCAGAAGCGTTTGTACAGCAGTCGCAACAGCAGCGGAGTGGG
CAGCAGCAGCAGCGGTAGCAGCAGCGGTAGCAGCAGCTCCTCATCGTCCA
GTCGCAGCATCTGGAGCCGCTCCAGCCAGCCGATTTGCGATGATTTCGCA
GAGCAACCACAACTGGACAAATCCTGCGGTTACTACACCTGCAGCAGCGC
CAATTCATCGCCGAGAAAGGGCCAGGAGAATGACGAGGAGATGGAGGGAG
TGCTTATGCGCACGCAGGACATGAGTGCATCATCCCGAGACTCTACACAA
TCCGATCAAATGGTGGGCAATCTGGAGTGGGAGATGCACATGATGCAGCA
GGCGCAGCGCATTATGCCCAAGACCTCGTCGCCGATTTGCCAAAGAAGGG
ATAATGCTCAGATGCCTCCCTCATCGTACCAGAAGTGGAGAAACTATCTG
CAATCCACGCCAGCGCACATGCTGCACAATGTCACCCACATTCCGGAGGC
AATTGCCGGCCACTTTTGCCCCACCAGCTTTCCGGGCTTCAGCGACCTGG
AGGAGATGGAGAGTGCGGCCAAGAGGTTCAAGGTGGATTTCGAGAAGGAA
CCACTGGAGGAGCCCATGTACACCACCTACCAATTGCTAGCCGGGCACAC
GCACACCATATCCACAGATCTGGCAAGCTTTCTAGACC
BO13402.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:03:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14427-PA | 759 | CG14427-RA | 1..756 | 17..772 | 3780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:10:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14427-RA | 1167 | CG14427-RA | 87..843 | 16..772 | 3785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:10:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7040689..7041445 | 16..772 | 3785 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:10:36 has no hits.
BO13402.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:02:16 Download gff for
BO13402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14427-PA | 1..759 | 17..775 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:47:41 Download gff for
BO13402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14427-PA | 1..759 | 17..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:38:02 Download gff for
BO13402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14427-RA | 87..849 | 16..778 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:40:41 Download gff for
BO13402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14427-RA | 87..849 | 16..778 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:40:41 Download gff for
BO13402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7040689..7041451 | 16..778 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:38:02 Download gff for
BO13402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6934722..6935484 | 16..778 | 99 | | Plus |
BO13402.complete Sequence
790 bp assembled on 2011-06-28
GenBank Submission: KX795332
> BO13402.complete
GAAGTTATCAGTCGACATGGGTTGTTGTGCAAGCAATCTGAAGCTCAAGG
AGCTGAGCAGCCTGAATAGCAGCATCTATGTGGCCTCCGGCGGATCGGCA
AGTCGCTCCCAGAAGCGTTTGTACAGCAGTCGCAACAGCAGCGGAGTGGG
CAGCAGCAGCAGCGGTAGCAGCAGCGGTAGCAGCAGCTCCTCATCGTCCA
GTCGCAGCATCTGGAGCCGCTCCAGCCAGCCGATTTGCGATGATTTCGCA
GAGCAACCACAACTGGACAAATCCTGCGGTTACTACACCTGCAGCAGCGC
CAATTCATCGCCGAGAAAGGGCCAGGAGAATGACGAGGAGATGGAGGGAG
TGCTTATGCGCACGCAGGACATGAGTGCATCATCCCGAGACTCTACACAA
TCCGATCAAATGGTGGGCAATCTGGAGTGGGAGATGCACATGATGCAGCA
GGCGCAGCGCATTATGCCCAAGACCTCGTCGCCGATTTGCCAAAGAAGGG
ATAATGCTCAGATGCCTCCCTCATCGTACCAGAAGTGGAGAAACTATCTG
CAATCCACGCCAGCGCACATGCTGCACAATGTCACCCACATTCCGGAGGC
AATTGCCGGCCACTTTTGCCCCACCAGCTTTCCGGGCTTCAGCGACCTGG
AGGAGATGGAGAGTGCGGCCAAGAGGTTCAAGGTGGATTTCGAGAAGGAA
CCACTGGAGGAGCCCATGTACACCACCTACCAATTGCTAGCCGGGCACAC
GCACACCATATCCACAGATCTGGCAAGCTTTCTAGACCAT
BO13402.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:07:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14427-RA | 759 | CG14427-PA | 1..756 | 17..772 | 3780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14427-RA | 1167 | CG14427-RA | 87..843 | 16..772 | 3785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7040689..7041445 | 16..772 | 3785 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:07:00 has no hits.
BO13402.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:16:08 Download gff for
BO13402.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14427-RA | 83..838 | 17..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:52:41 Download gff for
BO13402.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14427-RA | 88..843 | 17..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:34 Download gff for
BO13402.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14427-RA | 88..843 | 17..774 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:34 Download gff for
BO13402.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7040690..7041445 | 17..774 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:52:41 Download gff for
BO13402.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6934723..6935478 | 17..774 | 99 | | Plus |
BO13402.pep Sequence
Translation from 16 to 790
> BO13402.pep
MGCCASNLKLKELSSLNSSIYVASGGSASRSQKRLYSSRNSSGVGSSSSG
SSSGSSSSSSSSRSIWSRSSQPICDDFAEQPQLDKSCGYYTCSSANSSPR
KGQENDEEMEGVLMRTQDMSASSRDSTQSDQMVGNLEWEMHMMQQAQRIM
PKTSSPICQRRDNAQMPPSSYQKWRNYLQSTPAHMLHNVTHIPEAIAGHF
CPTSFPGFSDLEEMESAAKRFKVDFEKEPLEEPMYTTYQLLAGHTHTIST
DLASFLDH
BO13402.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:49:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14427-PA | 252 | CG14427-PA | 1..252 | 1..252 | 1315 | 100 | Plus |
