Clone Sequence Records
BO13412.3prime Sequence
728 bp (689 high quality bases) assembled on 2006-05-08
> BO13412.3prime
ATGGTCTAGAAAGCTTGCGCTGGCCACAGCGTCCAGTTGCTCCTGGATGG
CATTCAGCGCAAAGATGGTGCTAAAGCACATGCCCACGGTGGCCACCTCC
AATTGGCTGATGTTGTAGTGCAGCGGCAGTCGCCACAGGACAAAGTGATT
CAGCAGAACAAGCAGGGCCAGGCCAAGTGACCACCAGTGCTCGTCGACGA
TGGCGATGCGCCAAAGACAGTGGACATTCCACAGAACACAGAGGCCCAAT
TGCGCGGCATCCAGTTTTATGAATGTGGCACCCAGTGGACTGCGACTGTT
GCCGAACCACAAGCTGGTGACTGCAAGTGCCAGTACAGCGCTCCACAGTC
CAAAGGCCAGACGCTCCCAGTCGGCGCCGAAGAAGTCACCCATTCGGGTG
GCCGGATTTACGGTCTGCAGCTCGCCCACCACCAGGGTGACAAATAGGAC
GCAGGAGTAACGTCTCGACTTGTCGCACAGCAGACGCTGCACTGCGCCCG
GATTGGGATGCGTGTGCCGCAGCAGGCAGAGCAGGCTGTGGCCAAAGTAG
ATCCCAAAGGCGGCCATCGCCTTGCTGCCGGTGCTCCGTTTCAGACCCCA
GCCGGAGATCACGGCCAGGACGAAGTGGATCAGGCACAGGGCTAGCAGGG
AGGTGCCACCACTGGACCCCGGCAAGGGACCATGATTCGGAGGAGGACTT
CTGTTGGACACCATGTCGACTGATAACT
BO13412.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:03:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13014-PA | 699 | CG13014-RA | 1..696 | 714..19 | 3480 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:28:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13014-RA | 1058 | CG13014-RA | 236..931 | 714..19 | 3480 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:28:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16588108..16588803 | 714..19 | 3480 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:28:17 has no hits.
BO13412.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:02:33 Download gff for
BO13412.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-PA | 1..699 | 16..714 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:48:02 Download gff for
BO13412.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-PA | 1..699 | 16..714 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:39:54 Download gff for
BO13412.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 236..931 | 19..714 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:39:23 Download gff for
BO13412.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 236..931 | 19..714 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:39:23 Download gff for
BO13412.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16588108..16588803 | 19..714 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:39:54 Download gff for
BO13412.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16482141..16482836 | 19..714 | 100 | | Minus |
BO13412.5prime Sequence
728 bp (727 high quality bases) assembled on 2006-05-29
> BO13412.5prime
GAAGTTATCAGTCGACATGGTGTCCAACAGAAGTCCTCCTCCGAATCATG
GTCCCTTGCCGGGGTCCAGTGGTGGCACCTCCCTGCTAGCCCTGTGCCTG
ATCCACTTCGTCCTGGCCGTGATCTCCGGCTGGGGTCTGAAACGGAGCAC
CGGCAGCAAGGCGATGGCCGCCTTTGGGATCTACTTTGGCCACAGCCTGC
TCTGCCTGCTGCGGCACACGCATCCCAATCCGGGCGCAGTGCAGCGTCTG
CTGTGCGACAAGTCGAGACGTTACTCCTGCGTCCTATTTGTCACCCTGGT
GGTGGGCGAGCTGCAGACCGTAAATCCGGCCACCCGAATGGGTGACTTCT
TCGGCGCCGACTGGGAGCGTCTGGCCTTTGGACTGTGGAGCGCTGTACTG
GCACTTGCAGTCACCAGCTTGTGGTTCGGCAACAGTCGCAGTCCACTGGG
TGCCACATTCATAAAACTGGATGCCGCGCAATTGGGCCTCTGTGTTCTGT
GGAATGTCCACTGTCTTTGGCGCATCGCCATCGTCGACGAGCACTGGTGG
TCACTTGGCCTGGCCCTGCTTGTTCTGCTGAATCACTTTGTCCTGTGGCG
ACTGCCGCTGCACTACAACATCAGCCAATTGGAGGTGGCCACCGTGGGCA
TGTGCTTTAGCACCATCTTTGCGCTGAATGCCATCCAGGAGCAACTGGAC
GCTGTGGCCAGCGCAAGCTTTCTAGACC
BO13412.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:03:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13014-PA | 699 | CG13014-RA | 1..696 | 17..712 | 3480 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:25:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13014-RA | 1058 | CG13014-RA | 236..931 | 17..712 | 3480 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:25:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16588108..16588803 | 17..712 | 3480 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 02:25:04 has no hits.
BO13412.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:02:34 Download gff for
BO13412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-PA | 1..699 | 17..715 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:48:03 Download gff for
BO13412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-PA | 1..699 | 17..715 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:45:23 Download gff for
BO13412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 236..931 | 17..712 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:22:20 Download gff for
BO13412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 236..931 | 17..712 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:22:20 Download gff for
BO13412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16588108..16588803 | 17..712 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:45:23 Download gff for
BO13412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16482141..16482836 | 17..712 | 100 | | Plus |
BO13412.complete Sequence
730 bp assembled on 2006-10-11
GenBank Submission: FJ632777
> BO13412.complete
GAAGTTATCAGTCGACATGGTGTCCAACAGAAGTCCTCCTCCGAATCATG
GTCCCTTGCCGGGGTCCAGTGGTGGCACCTCCCTGCTAGCCCTGTGCCTG
ATCCACTTCGTCCTGGCCGTGATCTCCGGCTGGGGTCTGAAACGGAGCAC
CGGCAGCAAGGCGATGGCCGCCTTTGGGATCTACTTTGGCCACAGCCTGC
TCTGCCTGCTGCGGCACACGCATCCCAATCCGGGCGCAGTGCAGCGTCTG
CTGTGCGACAAGTCGAGACGTTACTCCTGCGTCCTATTTGTCACCCTGGT
GGTGGGCGAGCTGCAGACCGTAAATCCGGCCACCCGAATGGGTGACTTCT
TCGGCGCCGACTGGGAGCGTCTGGCCTTTGGACTGTGGAGCGCTGTACTG
GCACTTGCAGTCACCAGCTTGTGGTTCGGCAACAGTCGCAGTCCACTGGG
TGCCACATTCATAAAACTGGATGCCGCGCAATTGGGCCTCTGTGTTCTGT
GGAATGTCCACTGTCTTTGGCGCATCGCCATCGTCGACGAGCACTGGTGG
TCACTTGGCCTGGCCCTGCTTGTTCTGCTGAATCACTTTGTCCTGTGGCG
ACTGCCGCTGCACTACAACATCAGCCAATTGGAGGTGGCCACCGTGGGCA
TGTGCTTTAGCACCATCTTTGCGCTGAATGCCATCCAGGAGCAACTGGAC
GCTGTGGCCAGCGCAAGCTTTCTAGACCAT
BO13412.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:39:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13014-RA | 699 | CG13014-PA | 1..696 | 17..712 | 3480 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:39:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13014-RA | 1058 | CG13014-RA | 236..931 | 17..712 | 3480 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:39:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16588108..16588803 | 17..712 | 3480 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:39:14 has no hits.
BO13412.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:47:31 Download gff for
BO13412.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 1..699 | 17..715 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:01:50 Download gff for
BO13412.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 198..893 | 17..712 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:28:52 Download gff for
BO13412.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 236..931 | 17..714 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:47:31 Download gff for
BO13412.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 198..893 | 17..712 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:35:41 Download gff for
BO13412.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 236..931 | 17..714 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:35:41 Download gff for
BO13412.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16588108..16588803 | 17..714 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:28:52 Download gff for
BO13412.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16482141..16482836 | 17..714 | 99 | | Plus |
BO13412.pep Sequence
Translation from 16 to 730
> BO13412.pep
MVSNRSPPPNHGPLPGSSGGTSLLALCLIHFVLAVISGWGLKRSTGSKAM
AAFGIYFGHSLLCLLRHTHPNPGAVQRLLCDKSRRYSCVLFVTLVVGELQ
TVNPATRMGDFFGADWERLAFGLWSAVLALAVTSLWFGNSRSPLGATFIK
LDAAQLGLCVLWNVHCLWRIAIVDEHWWSLGLALLVLLNHFVLWRLPLHY
NISQLEVATVGMCFSTIFALNAIQEQLDAVASASFLDH
BO13412.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:57:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13014-PA | 232 | CG13014-PA | 1..232 | 1..232 | 1233 | 100 | Plus |
