Clone Sequence Records
BO13456.3prime Sequence
892 bp (791 high quality bases) assembled on 2006-05-08
> BO13456.3prime
ATGGTCTAGAAAGCTTGCCTTCTTCAGGCGGAACGAAGCAGCACGATTGA
ATTTGACCAAAGGCGGCTCCTTACTGGCCGATCCCAGCGGTTTTCTCGCA
AGCGTCGAGGTGCCTGCAAGGGCTTTGGCCATTAGCGCTCGTGGACTCTT
GCGCACATAGTTGGCGTTGTATTTTACGTTTTCCTTGGCCAGAGAAGCAG
CCGCCAACGTTCTCTGAAGTCCTTGCGCCGTAAAGTGATTCGACTTGAGT
AGAGCCTTCTTGATCTTTTCATTGCCACCGCGCACATTCTGATCGGATAT
CAGATCGCTGACCAGTCGCTGTTGGACGGTTCGCGGCTTGGTCACCGTCG
CCGTGAGTGCCTTCCTTGCGCTACTGCTGCTAGAAGTACTGCTGCTAGAA
CTACTGCTGCAGGGACCCAGGACCTGCGTTTCGTTTAGATTTCGTGGCCT
CTTAAACGTCCTGTGCAGCTCCTCGGAATCTGATTCGGTGTCCTGGCTAT
CAAAGTCCTCCATGCTCAAATGCAGATCGTCGTCGCTCTGAGCCGCTTGC
CTTTGTCGCTTTTTGGCGCTGGCCGTGAGGCTGCATGTGGGCTCTTCTTC
CTCCTGGGCGCTGCTGCGCAGAGCCACAGGCACCGCCAACGGATTCATCT
CGGCCATTTTGGTATTGGCCTCGGAATCGGCGAACCGCATCTTTCGCAGC
AACCTTTCGAAGACCGCCTCAATTTCCGGCGTCAGCTTTTGACCATCCTC
GAGGCGATCGTACGTCTGGTTGAGCACTTCGCAGGCTGTTCGGAAGGACT
TTCGCATCAGATCCAAGTTTCTCACCAGCTCCTGGTTAATTGCGTTCACG
TGATTGTTAAAGATATTCTGCTTGGTCAGCTGCAGCTCGAGA
BO13456.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:04:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10923-PA | 2445 | Klp67A-RA | 1642..2442 | 819..19 | 4005 | 100 | Minus |
| CG10923-PA | 2445 | Klp67A-RA | 1569..1637 | 892..824 | 345 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:18:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp67A-RC | 2994 | CG10923-RC | 1826..2699 | 892..19 | 4325 | 99.8 | Minus |
| Klp67A-RA | 2899 | CG10923-RA | 1731..2604 | 892..19 | 4325 | 99.8 | Minus |
| Klp67A-RB | 2991 | CG10923-RB | 1731..2369 | 892..254 | 3150 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 19:18:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9363373..9364010 | 255..892 | 3130 | 99.4 | Plus |
| 3L | 28110227 | 3L | 9363095..9363227 | 123..255 | 665 | 100 | Plus |
| 3L | 28110227 | 3L | 9362931..9363036 | 19..124 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 19:18:48 has no hits.
BO13456.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:03:53 Download gff for
BO13456.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10923-PA | 1570..2445 | 18..891 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:49:48 Download gff for
BO13456.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10923-PA | 1570..2445 | 18..891 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 17:21:34 Download gff for
BO13456.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp67A-RA | 1732..2604 | 19..891 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:07:51 Download gff for
BO13456.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp67A-RA | 1732..2604 | 19..891 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:07:51 Download gff for
BO13456.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9362931..9363034 | 19..122 | 100 | <- | Plus |
| 3L | 9363095..9363226 | 123..254 | 100 | <- | Plus |
| 3L | 9363373..9364009 | 255..891 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 17:21:34 Download gff for
BO13456.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9356031..9356134 | 19..122 | 100 | <- | Plus |
| arm_3L | 9356195..9356326 | 123..254 | 100 | <- | Plus |
| arm_3L | 9356473..9357109 | 255..891 | 99 | | Plus |
BO13456.5prime Sequence
888 bp (816 high quality bases) assembled on 2006-05-29
> BO13456.5prime
GAAGTTATCAGTCGACATGCCTTCGGAACAGCATACGAATATAAAAGTGG
CGGTTCGCGTACGGCCGTATAATGTCCGTGAATTGGAGCAAAAACAGCGG
AGTATTATCAAGGTCATGGATCGTTCGGCACTGCTGTTCGATCCCGACGA
GGAGGACGATGAGTTCTTCTTTCAGGGCGCCAAGCAACCGTACCGCGACA
TCACCAAGCGGATGAACAAAAAGTTGACCATGGAATTCGACAGGGTATTC
GATATAGACAATTCCAACCAGGATCTGTTCGAGGAGTGCACGGCGCCGCT
GGTCGACGCGGTGTTAAATGGATACAACTGCTCGGTATTTGTATATGGAG
CCACTGGCGCCGGAAAAACATTCACAATGCTGGGCAGCGAGGCTCATCCG
GGTCTGACCTATCTTACCATGCAAGATCTCTTCGATAAGATCCAAGCGCA
GAGCGACGTGCGCAAGTTCGATGTGGGGGTATCCTATCTAGAGGTGTACA
ACGAACATGTGATGAATCTGCTAACTAAATCGGGCCCTTTAAAACTTCGC
GAGGACAACAATGGCGTGGTGGTCAGTGGTCTTTGTCTCACGCCCATCTA
CAGTGCCGAGGAGCTGCTAAGAATGCTGATGCTGGGCAACTCTCATCGCA
CTCAGCACCCCACAGATGCCAATGCAGAGAGTTCCAGGTCACATGCCATC
TTCCAGGTGCACATTAGGATCACGGAGCGCAAGACCGACACCAAAAGAAC
GGTCAAACTATCCATGATCGATCTGGCGGGCAGTGAGAGGGCGGCCAGTA
CGAAAGGCATTGGAGTGCGATTCAAGGAAGGCGCCAGCATCAACAAAAGT
CTCTTAGCTTTTGGGAAATTGCATAAACAAGCTAAGCC
BO13456.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:04:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10923-PA | 2445 | Klp67A-RA | 1..845 | 17..861 | 4225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:19:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp67A-RB | 2991 | CG10923-RB | 163..1029 | 17..884 | 4315 | 99.9 | Plus |
| Klp67A-RC | 2994 | CG10923-RC | 258..1124 | 17..884 | 4315 | 99.9 | Plus |
| Klp67A-RA | 2899 | CG10923-RA | 163..1029 | 17..884 | 4315 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:19:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9365856..9366418 | 884..321 | 2770 | 99.8 | Minus |
| 3L | 28110227 | 3L | 9366485..9366789 | 321..17 | 1525 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:19:41 has no hits.
BO13456.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:03:54 Download gff for
BO13456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10923-PA | 1..870 | 17..888 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:49:49 Download gff for
BO13456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10923-PA | 1..870 | 17..888 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:15:15 Download gff for
BO13456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp67A-RA | 152..1032 | 5..888 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:39:59 Download gff for
BO13456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp67A-RA | 152..1032 | 5..888 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:39:59 Download gff for
BO13456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9365853..9366417 | 322..888 | 99 | <- | Minus |
| 3L | 9366485..9366800 | 5..321 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:15:15 Download gff for
BO13456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9358953..9359517 | 322..888 | 99 | <- | Minus |
| arm_3L | 9359585..9359900 | 5..321 | 98 | | Minus |
BO13456.complete Sequence
2476 bp assembled on 2008-08-14
GenBank Submission: FJ632786
> BO13456.complete
GAAGTTATCAGTCGACATGCCTTCGGAACAGCATACGAATATAAAAGTGG
CGGTTCGCGTACGGCCGTATAATGTCCGTGAATTGGAGCAAAAACAGCGG
AGTATTATCAAGGTCATGGATCGTTCGGCACTGCTGTTCGATCCCGACGA
GGAGGACGATGAGTTCTTCTTTCAGGGCGCCAAGCAACCGTACCGCGACA
TCACCAAGCGGATGAACAAAAAGTTGACCATGGAATTCGACAGGGTATTC
GATATAGACAATTCCAACCAGGATCTGTTCGAGGAGTGCACGGCGCCGCT
GGTCGACGCGGTGTTAAATGGATACAACTGCTCGGTATTTGTATATGGAG
CCACTGGCGCCGGAAAAACATTCACAATGCTGGGCAGCGAGGCTCATCCG
GGTCTGACCTATCTTACCATGCAAGATCTCTTCGATAAGATCCAAGCGCA
GAGCGACGTGCGCAAGTTCGATGTGGGGGTATCCTATCTAGAGGTGTACA
ACGAACATGTGATGAATCTGCTAACTAAATCGGGCCCTTTAAAACTTCGC
GAGGACAACAATGGCGTGGTGGTCAGTGGTCTTTGTCTCACGCCCATCTA
CAGTGCCGAGGAGCTGCTAAGAATGCTGATGCTGGGCAACTCTCATCGCA
CTCAGCACCCCACAGATGCCAATGCAGAGAGTTCCAGGTCACATGCCATC
TTCCAGGTGCACATTAGGATCACGGAGCGCAAGACCGACACCAAAAGAAC
GGTCAAACTATCCATGATCGATCTGGCGGGCAGTGAGAGGGCGGCCAGTA
CGAAAGGCATTGGAGTGCGATTCAAGGAAGGCGCCAGCATCAACAAAAGT
CTCTTAGCTTTGGGAAATTGCATAAACAAGCTAGCCGACGGCTTAAAGCA
CATCCCGTACCGCGACTCGAACCTGACACGCATCCTGAAGGACTCGTTGG
GCGGAAATTGTCGCACATTGATGGTGGCCAATGTCTCGATGAGCTCACTG
ACCTATGAAGATACCTACAACACCCTTAAGTACGCTAGCCGAGCTAAGAA
GATACGCACGACTCTGAAACAGAATGTCCTCAAGTCCAAGATGCCAACCG
AGTTCTATGTGAAGAAGATCGACGAGGTGGTAGCCGAGAACGAGCGACTC
AAAGAGCGCAACAAGGCGCTGGAGGCCAAGGCCACTCAGTTGGAGCGCGC
CGGCAATAGTGGATTCGATCCGCTGGAGCTTAAGACGTGGTACAGCAAGA
TAGACGCTGTATATGCGGCCGCCCGGCAGCTTCAGGAGCACGTCCTTGGT
ATGCGTAGCAAGATCAAGAACATCAACTACCGGCAGACACTGAAAAAAGA
ACTGGAGGAGTTCAGGAAGCTGATGTGTGTCGACCAGCGAGTGTGCCAGG
AGGACTTCCGTCGCTTTGCGAACTACATGAGCACACTGACCAGCCAGATG
GAGAAGTACAAGGAGGAGTTGCCCAGCTGGCTGAGTAAAATGGAGATTGC
CTACCAGGATCTAGAAAGTCTAAAGCGAGAGGTTAACAAATCAAAGGCCT
ACCAGATACTCATTGTATACGTTAAGTACAAGGATCTCGAGCTGCAGCTG
ACCAAGCAGAATATCTTTAACAATCACGTGAACGCAATTAACCAGGAGCT
GGTTGAGAACTTGGATCTGATGCGAAAGTCCTTCCGAACAGCCTGCGAAG
TGCTCAACCAGACGTACGATCGCCTCGAGGATGGTCAAAAGCTGACGCCG
GAAATTGAGGCGGTCTTCGAAAGGTTGCTGCGAAAGATGCGGTTCGCCGA
TTCCGAGGCCAATACCAAAATGGCCGAGATGAATCCGTTGGCGGTGCCTG
TGGCTCTGCGCAGCAGCGCCCAGGAGGAAGAAGAGCCCACATGCAGCCTC
ACGGCCAGCGCCAAAAAGCGACAAAGGCAAGCGGCTCAGAGCGACGACGA
TCTGCATTTGAGCATGGAGGACTTTGATAGCCAGGACACCGAATCAGATT
CCGAGGAGCTGCACAGGACGTTTAAGAGGCCACGAAATCTAAACGAAACG
CAGGTCCTGGGTCCCTGCAGCAGTAGTTCTAGCAGCAGTACTTCTAGCAG
CAGTAGCGCAAGGAAGGCACTCACGGCGACGGTGACCAAGCCGCGAACCG
TCCAACAGCGACTGGTCAGCGATCTGATATCCGATCAGAATGTGCGCGGT
GGCAATGAAAAGATCAAGAAGGCTCTACTCAAGTCGAATCACTTTACGGC
GCAAGGACTTCAGAGAACGTTGGCGGCTGCTTCTCTGGCCAAGGAAAACG
TAAAATACAACGCCAACTATGTGCGCAAGAGTCCACGAGCGCTAATGGCC
AAAGCCCTTGCAGGCACCTCGACGCTTGCGAGAAAACCGCTGGGATCGGC
CAGTAAGGAGCCGCCTTTGGTCAAATTCAATCGTGCTGCTTCGTTCCGCC
TGAAGAAGGCAAGCTTTCTAGACCAT
BO13456.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:22:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp67A-RC | 2445 | CG10923-PC | 1..2442 | 17..2458 | 12210 | 100 | Plus |
| Klp67A-RA | 2445 | CG10923-PA | 1..2442 | 17..2458 | 12210 | 100 | Plus |
| Klp67A-RB | 2223 | CG10923-PB | 1..2207 | 17..2223 | 11035 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:22:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp67A-RC | 2994 | CG10923-RC | 258..2699 | 17..2458 | 12210 | 100 | Plus |
| Klp67A-RA | 2899 | CG10923-RA | 163..2604 | 17..2458 | 12210 | 100 | Plus |
| Klp67A-RB | 2991 | CG10923-RB | 163..2369 | 17..2223 | 11035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:22:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9365336..9366418 | 1403..321 | 5415 | 100 | Minus |
| 3L | 28110227 | 3L | 9363373..9364194 | 2222..1401 | 4110 | 100 | Minus |
| 3L | 28110227 | 3L | 9366485..9366789 | 321..17 | 1525 | 100 | Minus |
| 3L | 28110227 | 3L | 9363095..9363227 | 2354..2222 | 665 | 100 | Minus |
| 3L | 28110227 | 3L | 9362931..9363036 | 2458..2353 | 530 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:22:07 has no hits.
BO13456.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:39:39 Download gff for
BO13456.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp67A-RA | 141..2593 | 5..2458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:47:44 Download gff for
BO13456.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp67A-RA | 163..2604 | 17..2460 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:06:27 Download gff for
BO13456.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp67A-RA | 152..2593 | 17..2460 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:52:11 Download gff for
BO13456.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp67A-RA | 163..2604 | 17..2460 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:52:11 Download gff for
BO13456.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9362929..9363034 | 2355..2460 | 98 | <- | Minus |
| 3L | 9363095..9363226 | 2223..2354 | 100 | <- | Minus |
| 3L | 9363373..9364192 | 1403..2222 | 100 | <- | Minus |
| 3L | 9365337..9366417 | 322..1402 | 100 | <- | Minus |
| 3L | 9366485..9366789 | 17..321 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:47:44 Download gff for
BO13456.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9356029..9356134 | 2355..2460 | 98 | <- | Minus |
| arm_3L | 9356195..9356326 | 2223..2354 | 100 | <- | Minus |
| arm_3L | 9356473..9357292 | 1403..2222 | 100 | <- | Minus |
| arm_3L | 9358437..9359517 | 322..1402 | 100 | <- | Minus |
| arm_3L | 9359585..9359889 | 17..321 | 100 | | Minus |
BO13456.pep Sequence
Translation from 16 to 2476
> BO13456.pep
MPSEQHTNIKVAVRVRPYNVRELEQKQRSIIKVMDRSALLFDPDEEDDEF
FFQGAKQPYRDITKRMNKKLTMEFDRVFDIDNSNQDLFEECTAPLVDAVL
NGYNCSVFVYGATGAGKTFTMLGSEAHPGLTYLTMQDLFDKIQAQSDVRK
FDVGVSYLEVYNEHVMNLLTKSGPLKLREDNNGVVVSGLCLTPIYSAEEL
LRMLMLGNSHRTQHPTDANAESSRSHAIFQVHIRITERKTDTKRTVKLSM
IDLAGSERAASTKGIGVRFKEGASINKSLLALGNCINKLADGLKHIPYRD
SNLTRILKDSLGGNCRTLMVANVSMSSLTYEDTYNTLKYASRAKKIRTTL
KQNVLKSKMPTEFYVKKIDEVVAENERLKERNKALEAKATQLERAGNSGF
DPLELKTWYSKIDAVYAAARQLQEHVLGMRSKIKNINYRQTLKKELEEFR
KLMCVDQRVCQEDFRRFANYMSTLTSQMEKYKEELPSWLSKMEIAYQDLE
SLKREVNKSKAYQILIVYVKYKDLELQLTKQNIFNNHVNAINQELVENLD
LMRKSFRTACEVLNQTYDRLEDGQKLTPEIEAVFERLLRKMRFADSEANT
KMAEMNPLAVPVALRSSAQEEEEPTCSLTASAKKRQRQAAQSDDDLHLSM
EDFDSQDTESDSEELHRTFKRPRNLNETQVLGPCSSSSSSSTSSSSSARK
ALTATVTKPRTVQQRLVSDLISDQNVRGGNEKIKKALLKSNHFTAQGLQR
TLAAASLAKENVKYNANYVRKSPRALMAKALAGTSTLARKPLGSASKEPP
LVKFNRAASFRLKKASFLDH
BO13456.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:11:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp67A-PC | 814 | CG10923-PC | 1..814 | 1..814 | 4109 | 100 | Plus |
| Klp67A-PA | 814 | CG10923-PA | 1..814 | 1..814 | 4109 | 100 | Plus |
| Klp67A-PB | 740 | CG10923-PB | 1..736 | 1..736 | 3728 | 100 | Plus |
| Kif19A-PB | 750 | CG9913-PB | 32..409 | 5..381 | 608 | 38.7 | Plus |
| Klp64D-PA | 677 | CG10642-PA | 20..577 | 8..545 | 592 | 32.3 | Plus |
