Clone Sequence Records
BO13502.complete Sequence
790 bp assembled on 2010-02-09
GenBank Submission: FJ632796
> BO13502.complete
GAAGTTATCAGTCGACATGGGTTGTTGTGCAAGCAATCTGAAGCTCAAGG
AGCTGAGCAGCCTGAATAGCAGCATCTATGTGGCCTCCGGCGGATCGGCA
AGTCGCTCCCAGAAGCGTTTGTACAGCAGTCGCAACAGCAGCGGAGTGGG
CAGCAGCAGCAGCGGTAGCAGCAGCGGTAGCAGCAGCTCCTCATCGTCCA
GTCGCAGCATCTGGAGCCGCTCCAGCCAGCCGATTTGCGATGATTTCGCA
GAGCAACCACAACTGGACAAATCCTGCGGTTACTACACCTGCAGCAGCGC
CAATTCATCGCCGAGAAAGGGCCAGGAGAATGACGAGGAGATGGAGGGAG
TGCTTATGCGCACGCAGGACATGAGTGCATCATCCCGAGACTCTACACAA
TCCGATCAAATGGTGGGCAATCTGGAGTGGGAGATGCACATGATGCAGCA
GGCGCAGCGCATTATGCCCAAGACCTCGTCGCCGATTTGCCAAAGAAGGG
ATAATGCTCAGATGCCTCCCTCATCGTACCAGAAGTGGAGAAACTATCTG
CAATCCACGCCAGCGCACATGCTGCACAATGTCACCCACATTCCGGAGGC
AATTGCCGGCCACTTTTGCCCCACCAGCTTTCCGGGCTTCAGCGACCTGG
AGGAGATGGAGAGTGCGGCCAAGAGGTTCAAGGTGGATTTCGAGAAGGAA
CCACTGGAGGAGCCCATGTACACCACCTACCAATTGCTAGCCGGGCACAC
GCACACCATATCCACAGATCTGGCAAGCTTTCTAGACCAT
BO13502.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:29:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14427-RA | 759 | CG14427-PA | 1..756 | 17..772 | 3780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:29:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14427-RA | 1167 | CG14427-RA | 87..843 | 16..772 | 3785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:29:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7040689..7041445 | 16..772 | 3785 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:29:04 has no hits.
BO13502.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:37 Download gff for
BO13502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14427-RA | 83..838 | 17..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:09 Download gff for
BO13502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14427-RA | 88..843 | 17..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:02:41 Download gff for
BO13502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14427-RA | 83..838 | 17..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:55 Download gff for
BO13502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14427-RA | 88..843 | 17..774 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:55 Download gff for
BO13502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7040690..7041445 | 17..774 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:09 Download gff for
BO13502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6934723..6935478 | 17..774 | 99 | | Plus |
BO13502.5prime Sequence
788 bp (771 high quality bases) assembled on 2006-05-08
> BO13502.5prime
GAAGTTATCAGTCGACATGGGTTGTTGTGCAAGCAATCTGAAGCTCAAGG
AGCTGAGCAGCCTGAATAGCAGCATCTATGTGGCCTCCGGCGGATCGGCA
AGTCGCTCCCAGAAGCGTTTGTACAGCAGTCGCAACAGCAGCGGAGTGGG
CAGCAGCAGCAGCGGTAGCAGCAGCGGTAGCAGCAGCTCCTCATCGTCCA
GTCGCAGCATCTGGAGCCGCTCCAGCCAGCCGATTTGCGATGATTTCGCA
GAGCAACCACAACTGGACAAATCCTGCGGTTACTACACCTGCAGCAGCGC
CAATTCATCGCCGAGAAAGGGCCAGGAGAATGACGAGGAGATGGAGGGAG
TGCTTATGCGCACGCAGGACATGAGTGCATCATCCCGAGACTCTACACAA
TCCGATCAAATGGTGGGCAATCTGGAGTGGGAGATGCACATGATGCAGCA
GGCGCAGCGCATTATGCCCAAGACCTCGTCGCCGATTTGCCAAAGAAGGG
ATAATGCTCAGATGCCTCCCTCATCGTACCAGAAGTGGAGAAACTATCTG
CAATCCACGCCAGCGCACATGCTGCACAATGTCACCCACATTCCGGAGGC
AATTGCCGGCCACTTTTGCCCCACCAGCTTTCCGGGCTTCAGCGACCTGG
AGGAGATGGAGAGTGCGGCCAAGAGGTTCAAGGTGGATTTCGAGAAGGAA
CCACTGGAGGAGCCCATGTACACCACCTACCAATTGCTAGCCGGGCACAC
GCACACCATATCCACAGATCTGGCAAGCTTTCTAGACC
BO13502.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:05:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14427-PA | 759 | CG14427-RA | 1..756 | 17..772 | 3780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:53:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14427-RA | 1167 | CG14427-RA | 87..843 | 16..772 | 3785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:52:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7040689..7041445 | 16..772 | 3785 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 10:52:59 has no hits.
BO13502.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:05:03 Download gff for
BO13502.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14427-PA | 1..759 | 17..775 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:51:24 Download gff for
BO13502.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14427-PA | 1..759 | 17..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:16:28 Download gff for
BO13502.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14427-RA | 87..849 | 16..778 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:21:53 Download gff for
BO13502.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14427-RA | 87..849 | 16..778 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:21:53 Download gff for
BO13502.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7040689..7041451 | 16..778 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:16:28 Download gff for
BO13502.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6934722..6935484 | 16..778 | 99 | | Plus |
BO13502.pep Sequence
Translation from 16 to 790
> BO13502.pep
MGCCASNLKLKELSSLNSSIYVASGGSASRSQKRLYSSRNSSGVGSSSSG
SSSGSSSSSSSSRSIWSRSSQPICDDFAEQPQLDKSCGYYTCSSANSSPR
KGQENDEEMEGVLMRTQDMSASSRDSTQSDQMVGNLEWEMHMMQQAQRIM
PKTSSPICQRRDNAQMPPSSYQKWRNYLQSTPAHMLHNVTHIPEAIAGHF
CPTSFPGFSDLEEMESAAKRFKVDFEKEPLEEPMYTTYQLLAGHTHTIST
DLASFLDH
BO13502.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:09:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14427-PA | 252 | CG14427-PA | 1..252 | 1..252 | 1315 | 100 | Plus |