Clone BO13503 Report

Search the DGRC for BO13503

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:135
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG31145-RA
Protein status:BO13503.pep: validated full length
Sequenced Size:1618

Clone Sequence Records

BO13503.3prime Sequence

846 bp (779 high quality bases) assembled on 2006-05-08

> BO13503.3prime
ATGGTCTAGAAAGCTTGCCGAGGAGACGTCCGTCTCGGATCCGTCCACGT
CGCCCGGCGGATTGCGCTTTATGCAGTCGCGTATGCTTTGCAGGATGATG
CCGGTCCGGCGGTCCAGCGCCTCCAGGTGCGGCTGCCAGAGCACCGGACT
GACGGGATCCTGGCTCAGGGATTCGCTCATCAGCTGGGACAGCGGCTTGG
GACCATTGTGGAAGTCTAGCAGCTTGACGAGCGTCGACTTGCGTATCAGG
CAGCACTGCAGCACCGGCGCCAGGATGGAGAGCTCGTCGTGGAAGGGCCG
CCCGAAACCACGGCCGTGGTCCAAATGCAGGGGGAAAGTCTCGTTGCCGT
AGACCTTGAATGTCTCGTAATGATGACGATCCATGTTGCCAGTGAGAAAA
TCAAAGACGGCCATGTCCATAAGGTCGTACAGTCGCCTTCCATCGTCGTA
GGGCGGAATATCACGGACCAGGGCACAATAATTGGCATCTGTCTCCCATT
GGGCCTTCTTCCTTTTGTGGTAGGACCGTCGCCAGGGATGCCGCCACAGC
TTGCGATTGCCCGACTCAAAGTTGGGCAGAAAGGCGGCGAAGGAGCCCTC
CAACATGTCCGGATTGCCGCAAATGGCATGCGAGGTGTCACAATAGTACG
AGCACTTGCCATGGAAGCATAAATTCAGCGATGGCGAAACAAAGAACGTC
TTCAATAAATTCTCCTCGGCCAGTTGATAAATTTCGGTCGTAATGTTCAG
CGTACGACCGGCAACGGGCATGGCACGCCGGAATCCCAGGATCCTGTCCA
GGTGGAAGGCGGCAATCTCGGCGTTGTGGCGCTCATAGTCCGTGAA

BO13503.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:05:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG31145-PA 1587 CG31145-RA 757..1584 846..19 4140 100 Minus
CG31145-PB 1587 CG31145-RB 757..1584 846..19 4140 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:20:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG31145-RF 3714 CG31145-RF 1784..2611 846..19 4140 100 Minus
CG31145-RC 4524 CG31145-RC 2594..3421 846..19 4140 100 Minus
CG31145-RB 2595 CG31145-RB 1666..2493 846..19 4140 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:19:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23611893..23612139 550..796 1235 100 Plus
3R 32079331 3R 23606854..23607049 19..214 980 100 Plus
3R 32079331 3R 23607525..23607665 215..355 705 100 Plus
3R 32079331 3R 23608368..23608482 355..469 575 100 Plus
3R 32079331 3R 23608717..23608801 467..551 425 100 Plus
3R 32079331 3R 23614376..23614429 793..846 270 100 Plus
Blast to na_te.dros performed on 2015-02-12 04:20:00 has no hits.

BO13503.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:05:05 Download gff for BO13503.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31145-PA 759..1587 18..844 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:51:26 Download gff for BO13503.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31145-PB 759..1587 18..844 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 22:43:54 Download gff for BO13503.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31145-RB 1666..2497 13..846 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:09:53 Download gff for BO13503.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31145-RB 1666..2497 13..846 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:09:53 Download gff for BO13503.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 23606850..23607049 13..214 98 <- Plus
3R 23607525..23607665 215..355 100 <- Plus
3R 23608369..23608481 356..468 100 <- Plus
3R 23608719..23608799 469..549 100 <- Plus
3R 23611893..23612136 550..793 100 <- Plus
3R 23614377..23614429 794..846 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 22:43:54 Download gff for BO13503.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19432572..19432771 13..214 98 <- Plus
arm_3R 19433247..19433387 215..355 100 <- Plus
arm_3R 19434091..19434203 356..468 100 <- Plus
arm_3R 19434441..19434521 469..549 100 <- Plus
arm_3R 19437615..19437858 550..793 100 <- Plus
arm_3R 19440099..19440151 794..846 100   Plus

BO13503.5prime Sequence

873 bp (841 high quality bases) assembled on 2006-05-08

> BO13503.5prime
GAAGTTATCAGTCGACATGGCCGTCCTGCGTACTATGAAATTAAAGGAGC
GACTGGTCATCAGTCTGGGTGCCACCCTCGTCCTGCTCACCCTTCTGCTT
ATCGTCGATGTGCAGATGGACTTCGGTGTGGCCAATCGCCACCTCCTTCA
GCAACAGCACCAAAAGATCCGACTGGGCAACGACTACGATGGTGGCACGG
GTGGCGGTGGAATGCTGCACGAGTTCAAGCGCAAATTCCTGCAGAAGAGC
AACGCCTCGGGCTCCAAGGAGGCATCCACGCAGGCGGGGGCGAGCCAGAG
TGGCGGGGCGACCAGTGGTCAGGATGCGGCTGCCGGAGCTTCGGGCGGAG
CAGCCGGACCCGGCACATCAAGGAGCACATCCACGAGGAAGCCCACACCA
CACGATCGCTATGCGGATCTGCAAAAGCACCTGCTTAGCGATGAGTACTC
GCATGTGATTGTGGACAATGCGCCGGATGTGAGCAGGGACAATCCCACGC
TGGCCGAGATGCTGCACCGCAAGGCCAGTGCAAATGCCAGCAATTTGGAG
CGCTTCCAATTGCGCATCACGAAGAAGGAGCTGTACGGCGAGCAGGACAC
TCTGGTGGATGCGGTGTTACGTGACATGATCAAGCTGCCAATACAGCATG
TTGTGCAAAAGGAGGGCGGCACCCAGCTGAAATTGATCATCGAGTACCCA
AACGATATCAAGGCCTTAATGAAGCCGATGCGGTTTCCGCGGGAGCAGCA
AACGTTGCCCAACCACTTCTACTTCACGGACTATGAGCGCCACAACGCCG
AGATTGCCGCCTTCCACCTGGACAGGATCCTGGGATTCCGGCGTGCCATG
CCCGTTGCCGGTCGTACGCTGAA

BO13503.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:05:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG31145-PA 1587 CG31145-RA 1..857 17..873 4285 100 Plus
CG31145-PB 1587 CG31145-RB 1..857 17..873 4285 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:52:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG31145-RF 3714 CG31145-RF 1027..1884 16..873 4290 100 Plus
CG31145-RD 3519 CG31145-RD 1837..2694 16..873 4290 100 Plus
CG31145-RC 4524 CG31145-RC 1837..2694 16..873 4290 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:52:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23622371..23622651 528..248 1405 100 Minus
3R 32079331 3R 23626597..23626830 249..16 1170 100 Minus
3R 32079331 3R 23616198..23616325 653..526 640 100 Minus
3R 32079331 3R 23614376..23614470 826..732 475 100 Minus
3R 32079331 3R 23615126..23615207 734..653 410 100 Minus
3R 32079331 3R 23612089..23612139 873..823 255 100 Minus
Blast to na_te.dros performed on 2015-02-12 10:52:53 has no hits.

BO13503.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:05:06 Download gff for BO13503.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31145-PA 1..855 17..871 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:51:27 Download gff for BO13503.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31145-PB 1..855 17..871 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:16:26 Download gff for BO13503.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31145-RC 1828..2694 9..873 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:21:51 Download gff for BO13503.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31145-RC 1828..2694 9..873 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:21:51 Download gff for BO13503.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 23622371..23622649 250..528 100 <- Minus
3R 23626597..23626833 9..249 98   Minus
3R 23612089..23612136 826..873 100 <- Minus
3R 23614377..23614469 733..825 100 <- Minus
3R 23615128..23615206 654..732 100 <- Minus
3R 23616198..23616322 529..653 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:16:26 Download gff for BO13503.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19437811..19437858 826..873 100 <- Minus
arm_3R 19440099..19440191 733..825 100 <- Minus
arm_3R 19440850..19440928 654..732 100 <- Minus
arm_3R 19441920..19442044 529..653 100 <- Minus
arm_3R 19448093..19448371 250..528 100 <- Minus
arm_3R 19452319..19452555 9..249 98   Minus

BO13503.complete Sequence

1618 bp assembled on 2007-07-13

GenBank Submission: FJ632797

> BO13503.complete
GAAGTTATCAGTCGACATGGCCGTCCTGCGTACTATGAAATTAAAGGAGC
GACTGGTCATCAGTCTGGGTGCCACCCTCGTCCTGCTCACCCTTCTGCTT
ATCGTCGATGTGCAGATGGACTTCGGTGTGGCCAATCGCCACCTCCTTCA
GCAACAGCACCAAAAGATCCGACTGGGCAACGACTACGATGGTGGCACGG
GTGGCGGTGGAATGCTGCACGAGTTCAAGCGCAAATTCCTGCAGAAGAGC
AACGCCTCGGGCTCCAAGGAGGCATCCACGCAGGCGGGGGCGAGCCAGAG
TGGCGGGGCGACCAGTGGTCAGGATGCGGCTGCCGGAGCTTCGGGCGGAG
CAGCCGGACCCGGCACATCAAGGAGCACATCCACGAGGAAGCCCACACCA
CACGATCGCTATGCGGATCTGCAAAAGCACCTGCTTAGCGATGAGTACTC
GCATGTGATTGTGGACAATGCGCCGGATGTGAGCAGGGACAATCCCACGC
TGGCCGAGATGCTGCACCGCAAGGCCAGTGCAAATGCCAGCAATTTGGAG
CGCTTCCAATTGCGCATCACGAAGAAGGAGCTGTACGGCGAGCAGGACAC
TCTGGTGGATGCGGTGTTACGTGACATGATCAAGCTGCCAATACAGCATG
TTGTGCAAAAGGAGGGCGGCACCCAGCTGAAATTGATCATCGAGTACCCA
AACGATATCAAGGCCTTAATGAAGCCGATGCGGTTTCCGCGGGAGCAGCA
AACGTTGCCCAACCACTTCTACTTCACGGACTATGAGCGCCACAACGCCG
AGATTGCCGCCTTCCACCTGGACAGGATCCTGGGATTCCGGCGTGCCATG
CCCGTTGCCGGTCGTACGCTGAACATTACGACCGAAATTTATCAACTGGC
CGAGGAGAATTTATTGAAGACGTTCTTTGTTTCGCCATCGCTGAATTTAT
GCTTCCATGGCAAGTGCTCGTACTATTGTGACACCTCGCATGCCATTTGC
GGCAATCCGGACATGTTGGAGGGCTCCTTCGCCGCCTTTCTGCCCAACTT
TGAGTCGGGCAATCGCAAGCTGTGGCGGCATCCCTGGCGACGGTCCTACC
ACAAAAGGAAGAAGGCCCAATGGGAGACAGATGCCAATTATTGTGCCCTG
GTCCGTGATATTCCGCCCTACGACGATGGAAGGCGACTGTACGACCTTAT
GGACATGGCCGTCTTTGATTTTCTCACTGGCAACATGGATCGTCATCATT
ACGAGACATTCAAGGTCTACGGCAACGAGACTTTCCCCCTGCATTTGGAC
CACGGCCGTGGTTTCGGGCGGCCCTTCCACGACGAGCTCTCCATCCTGGC
GCCGGTGCTGCAGTGCTGCCTGATACGCAAGTCGACGCTCGTCAAGCTGC
TAGACTTCCACAATGGTCCCAAGCCGCTGTCCCAGCTGATGAGCGAATCC
CTGAGCCAGGATCCCGTCAGTCCGGTGCTCTGGCAGCCGCACCTGGAGGC
GCTGGACCGCCGGACCGGCATCATCCTGCAAAGCATACGCGACTGCATAA
AGCGCAATCCGCCGGGCGACGTGGACGGATCCGAGACGGACGTCTCCTCG
GCAAGCTTTCTAGACCAT

BO13503.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:39:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG31145-RC 2943 CG31145-PC 1356..2940 16..1600 7925 100 Plus
CG31145-RF 1587 CG31145-PF 1..1584 17..1600 7920 100 Plus
CG31145-RB 1587 CG31145-PB 1..1584 17..1600 7920 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:39:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG31145-RF 3714 CG31145-RF 1027..2611 16..1600 7925 100 Plus
CG31145-RC 4524 CG31145-RC 1837..3421 16..1600 7925 100 Plus
CG31145-RB 2595 CG31145-RB 909..2493 16..1600 7925 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:39:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23622371..23622651 528..248 1405 100 Minus
3R 32079331 3R 23611893..23612139 1069..823 1235 100 Minus
3R 32079331 3R 23626597..23626830 249..16 1170 100 Minus
3R 32079331 3R 23606854..23607049 1600..1405 980 100 Minus
3R 32079331 3R 23607525..23607665 1404..1264 705 100 Minus
3R 32079331 3R 23616198..23616325 653..526 640 100 Minus
3R 32079331 3R 23608368..23608482 1264..1150 575 100 Minus
3R 32079331 3R 23614376..23614470 826..732 475 100 Minus
3R 32079331 3R 23608717..23608801 1152..1068 425 100 Minus
3R 32079331 3R 23615126..23615207 734..653 410 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:39:43 has no hits.

BO13503.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:48 Download gff for BO13503.complete
Subject Subject Range Query Range Percent Splice Strand
CG31145-RE 705..2301 9..1601 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:02:55 Download gff for BO13503.complete
Subject Subject Range Query Range Percent Splice Strand
CG31145-RC 1835..3418 17..1602 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:19 Download gff for BO13503.complete
Subject Subject Range Query Range Percent Splice Strand
CG31145-RB 910..2493 17..1602 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:48 Download gff for BO13503.complete
Subject Subject Range Query Range Percent Splice Strand
CG31145-RC 1825..3422 9..1606 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:22:29 Download gff for BO13503.complete
Subject Subject Range Query Range Percent Splice Strand
CG31145-RB 910..2493 17..1602 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:22:29 Download gff for BO13503.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23606850..23607049 1405..1602 99 <- Minus
3R 23607525..23607665 1264..1404 100 <- Minus
3R 23608369..23608481 1151..1263 100 <- Minus
3R 23608719..23608799 1070..1150 100 <- Minus
3R 23611893..23612136 826..1069 100 <- Minus
3R 23614377..23614469 733..825 100 <- Minus
3R 23615128..23615206 654..732 100 <- Minus
3R 23616198..23616322 529..653 100 <- Minus
3R 23622371..23622649 250..528 100 <- Minus
3R 23626597..23626829 17..249 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:19 Download gff for BO13503.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19434441..19434521 1070..1150 100 <- Minus
arm_3R 19437615..19437858 826..1069 100 <- Minus
arm_3R 19440099..19440191 733..825 100 <- Minus
arm_3R 19440850..19440928 654..732 100 <- Minus
arm_3R 19441920..19442044 529..653 100 <- Minus
arm_3R 19448093..19448371 250..528 100 <- Minus
arm_3R 19452319..19452551 17..249 100   Minus
arm_3R 19432572..19432771 1405..1602 99 <- Minus
arm_3R 19433247..19433387 1264..1404 100 <- Minus
arm_3R 19434091..19434203 1151..1263 100 <- Minus

BO13503.pep Sequence

Translation from 16 to 1618

> BO13503.pep
MAVLRTMKLKERLVISLGATLVLLTLLLIVDVQMDFGVANRHLLQQQHQK
IRLGNDYDGGTGGGGMLHEFKRKFLQKSNASGSKEASTQAGASQSGGATS
GQDAAAGASGGAAGPGTSRSTSTRKPTPHDRYADLQKHLLSDEYSHVIVD
NAPDVSRDNPTLAEMLHRKASANASNLERFQLRITKKELYGEQDTLVDAV
LRDMIKLPIQHVVQKEGGTQLKLIIEYPNDIKALMKPMRFPREQQTLPNH
FYFTDYERHNAEIAAFHLDRILGFRRAMPVAGRTLNITTEIYQLAEENLL
KTFFVSPSLNLCFHGKCSYYCDTSHAICGNPDMLEGSFAAFLPNFESGNR
KLWRHPWRRSYHKRKKAQWETDANYCALVRDIPPYDDGRRLYDLMDMAVF
DFLTGNMDRHHYETFKVYGNETFPLHLDHGRGFGRPFHDELSILAPVLQC
CLIRKSTLVKLLDFHNGPKPLSQLMSESLSQDPVSPVLWQPHLEALDRRT
GIILQSIRDCIKRNPPGDVDGSETDVSSASFLDH

BO13503.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:10:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG31145-PF 528 CG31145-PF 1..528 1..528 2786 100 Plus
CG31145-PC 980 CG31145-PC 453..980 1..528 2786 100 Plus
CG31145-PB 528 CG31145-PB 1..528 1..528 2786 100 Plus
CG31145-PA 528 CG31145-PA 1..528 1..528 2786 100 Plus
CG31145-PD 915 CG31145-PD 453..915 1..463 2439 99.8 Plus