Clone Sequence Records
BO13553.3prime Sequence
890 bp (756 high quality bases) assembled on 2006-05-08
> BO13553.3prime
ATGGTCTAGAAAGCTTGCATTCAAAGGTTCTAGGTATAGCTCTTCCTCGC
ATGGCACTTGCTCCACTTTACTGTTTAGACCGTCACATGACTTTAATTTT
GACTCGGTTGCAGCTTGCAGTTGTTTCAGCCTTTCTGGAACATCGTTAGT
GGCCAAAATCATGCCACCAAGTCTGTGTTTAAGGGCGGAAAATGTTGGCC
TGTGTGATGGCACGGAGCTCCAGCAGCTTTCCATCAGGGAAAACATTTCT
TGCGTACATCCCTCCGGTCGCTTCATCCGATGACCTTGTCGCAGTAGCTG
CAAGAGATCACTGGGAGACACCGACGGATATGGCATTCCACCGAGAGTGG
TGATCTCATAGAGCAGCACACCAAAGGACCAAACATCGCTCTGACTGGTG
TACACCTGGTGGGTGAGGGACTCCAGCGCGAGCCACTTGATGGGCAGCTT
GCCACTTCCTCCGGACTTTCGGTACACGTTCTCATGATACACATCTCGAC
TCAGCCCAAAATCTGCTATCTTGATGCTGCGATCTACGGAGATTAGAACA
TTCCGGGCAGCCAGATCCCTATGCACTACTTTGTTTTGGGCCAGAAATTC
CATTCCCACCGCCACCTGTTGGGCGATGTCTAGCAAATCTGCATATTTCA
GTGGTATTCGGGGCTTGGTATCCGATGAGTCGAGGCAATCAAAGTATTCC
TTGTTCTCAAAGATTCGCTTCTTGTTGTCCGATTTGAAATCCTGCTTCGA
GTCTTTCTTGGGCTGCGGCTTCAGCTTCCGTTTTGGCCGATCCTTTGGAG
CTTCAGCGGTTTTGGGAATGTAACTCCCACCGATGTTTTCAATGTCCTCC
AGGCCATAGCCCTTGTTGTCGGCTGCATTGGTTATTCGAG
BO13553.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:06:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1389-PA | 2772 | tor-RA | 1898..2769 | 890..19 | 4360 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:31:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tor-RD | 3116 | CG1389-RD | 2122..2993 | 890..19 | 4360 | 100 | Minus |
tor-RA | 3131 | CG1389-RA | 2137..3008 | 890..19 | 4360 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:31:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7706181..7706471 | 600..890 | 1455 | 100 | Plus |
2R | 25286936 | 2R | 7705416..7705589 | 71..244 | 870 | 100 | Plus |
2R | 25286936 | 2R | 7705644..7705783 | 243..382 | 700 | 100 | Plus |
2R | 25286936 | 2R | 7705844..7705967 | 383..506 | 620 | 100 | Plus |
2R | 25286936 | 2R | 7706019..7706115 | 505..601 | 485 | 100 | Plus |
2R | 25286936 | 2R | 7705306..7705359 | 19..72 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:31:48 has no hits.
BO13553.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed on 2007-01-18 06:06:34 has no hits.
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:53:27 Download gff for
BO13553.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1389-PA | 1898..2772 | 15..890 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:59:18 Download gff for
BO13553.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tor-RA | 2137..3011 | 15..890 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:05:43 Download gff for
BO13553.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tor-RA | 2137..3011 | 15..890 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:05:43 Download gff for
BO13553.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7705646..7705783 | 245..382 | 100 | <- | Plus |
2R | 7705844..7705966 | 383..505 | 100 | <- | Plus |
2R | 7706020..7706114 | 506..600 | 100 | <- | Plus |
2R | 7706182..7706471 | 601..890 | 100 | | Plus |
2R | 7705303..7705357 | 15..70 | 96 | <- | Plus |
2R | 7705416..7705589 | 71..244 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:59:18 Download gff for
BO13553.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3593151..3593288 | 245..382 | 100 | <- | Plus |
arm_2R | 3593349..3593471 | 383..505 | 100 | <- | Plus |
arm_2R | 3593525..3593619 | 506..600 | 100 | <- | Plus |
arm_2R | 3592808..3592862 | 15..70 | 96 | <- | Plus |
arm_2R | 3592921..3593094 | 71..244 | 100 | <- | Plus |
arm_2R | 3593687..3593976 | 601..890 | 100 | | Plus |
BO13553.5prime Sequence
892 bp (787 high quality bases) assembled on 2006-05-08
> BO13553.5prime
GAAGTTATCAGTCGACATGCTTATTTTCTACGCGAAGTACGCATTTATCT
TCTGGTTTTTCGTGGGAAGCAATCAAGGTGAAATGTTGCTAATGGACAAA
ATCTCTCACGATAAGACGCTTCTCAACGTCACCGCTTGCACCCAGAATTG
TCTGGAAAAGGGCCAGATGGATTTCCGAAGCTGTTTAAAGGACTGCAGGA
TTAATGGAACATTTCCCGGGGCTCTGCGCAAGGTGCAGGAAAACTACCAG
ATGAACATGATCTGCCGCACGGAGTCGGAAATCGTTTTCCAAATAGATTG
GGTGCAGCACAGCAGGGGAACCGAGCCGGCTCCAAATGCCACCTACATAA
TCCGGGTGGATGCTGTCAAGGACGACAACAAAGAAACTGCGCTTTACCTG
TCTGATGACAACTTTCTCATCCTGCCGGGATTGGAGTCCAACTCTACCCA
CAACATCACCGCCCTGGCGATGCACGGAGATGGCAGCTACTCCTTGATAG
CAAAGGACCAGACCTTCGCCACCCTCATCCGAGGCTATCAGCCCAGCAAA
ATGGGAGCGGTGAATCTGCTGCGGTTTGTCCCCCAACCAGACGACCTGCA
TCACATTGCTGCCGAAATCGAGTGGAAGCCATCGGCGGAGAGCAACTGCT
ATTTCGACATGGTGTCGTATTCAACCAACAGCGTGAATATGGACGAGCCA
CTGGAGGTGCAGTTCCGGGATCGCAAAAAGCTGTACAGGCACACGGTGGA
CAACTTGGAGTTTGACAAACAGTATCACGTTGGCGTAAGAACGGTGAACA
TAATGAATCGACTGGAGAGCGATCTGCAGTGGCTGCCAATCGCTGTTCCA
AGCTGCTTGGATTGGTATCCCTATAACTACACACTCTGCCCA
BO13553.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:06:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1389-PA | 2772 | tor-RA | 1..876 | 17..892 | 4380 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:43:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tor-RD | 3116 | CG1389-RD | 240..1115 | 17..892 | 4380 | 100 | Plus |
tor-RA | 3131 | CG1389-RA | 240..1115 | 17..892 | 4380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:43:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7708105..7708343 | 638..400 | 1195 | 100 | Minus |
2R | 25286936 | 2R | 7708495..7708726 | 400..169 | 1160 | 100 | Minus |
2R | 25286936 | 2R | 7707737..7707905 | 890..722 | 845 | 100 | Minus |
2R | 25286936 | 2R | 7708792..7708945 | 170..17 | 770 | 100 | Minus |
2R | 25286936 | 2R | 7707962..7708045 | 721..638 | 420 | 100 | Minus |
Blast to na_te.dros performed 2015-02-12 01:43:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 519..749 | 217..445 | 125 | 55.6 | Plus |
BO13553.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:06:35 Download gff for
BO13553.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tor-PA | 1415..1426 | 240..251 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:53:28 Download gff for
BO13553.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1389-PA | 1..875 | 17..891 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:40:01 Download gff for
BO13553.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tor-RA | 234..1114 | 10..891 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:43:40 Download gff for
BO13553.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tor-RA | 234..1114 | 10..891 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:43:40 Download gff for
BO13553.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7707736..7707905 | 722..891 | 99 | <- | Minus |
2R | 7707962..7708044 | 639..721 | 100 | <- | Minus |
2R | 7708105..7708342 | 401..638 | 100 | <- | Minus |
2R | 7708495..7708725 | 170..400 | 100 | <- | Minus |
2R | 7708793..7708951 | 10..169 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:40:01 Download gff for
BO13553.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3595241..3595410 | 722..891 | 99 | <- | Minus |
arm_2R | 3595467..3595549 | 639..721 | 100 | <- | Minus |
arm_2R | 3595610..3595847 | 401..638 | 100 | <- | Minus |
arm_2R | 3596000..3596230 | 170..400 | 100 | <- | Minus |
arm_2R | 3596298..3596456 | 10..169 | 97 | | Minus |
BO13553.complete Sequence
2803 bp assembled on 2008-08-14
GenBank Submission: FJ632828
> BO13553.complete
GAAGTTATCAGTCGACATGCTTATTTTCTACGCGAAGTACGCATTTATCT
TCTGGTTTTTCGTGGGAAGCAATCAAGGTGAAATGTTGCTAATGGACAAA
ATCTCTCACGATAAGACGCTTCTCAACGTCACCGCTTGCACCCAGAATTG
TCTGGAAAAGGGCCAGATGGATTTCCGAAGCTGTTTAAAGGACTGCAGGA
TTAATGGAACATTTCCCGGGGCTCTGCGCAAGGTGCAGGAAAACTACCAG
ATGAACATGATCTGCCGCACGGAGTCGGAAATCGTTTTCCAAATAGATTG
GGTGCAGCACAGCAGGGGAACCGAGCCGGCTCCAAATGCCACCTACATAA
TCCGGGTGGATGCTGTCAAGGACGACAACAAAGAAACTGCGCTTTACCTG
TCTGATGACAACTTTCTCATCCTGCCGGGATTGGAGTCCAACTCTACCCA
CAACATCACCGCCCTGGCGATGCACGGAGATGGCAGCTACTCCTTGATAG
CAAAGGACCAGACCTTCGCCACCCTCATCCGAGGCTATCAGCCCAGCAAA
ATGGGAGCGGTGAATCTGCTGCGGTTTGTCCCCCAACCAGACGACCTGCA
TCACATTGCTGCCGAAATCGAGTGGAAGCCATCGGCGGAGAGCAACTGCT
ATTTCGACATGGTGTCGTATTCAACCAACAGCGTGAATATGGACGAGCCA
CTGGAGGTGCAGTTCCGGGATCGCAAAAAGCTGTACAGGCACACGGTGGA
CAACTTGGAGTTTGACAAACAGTATCACGTTGGCGTAAGAACGGTGAACA
TAATGAATCGACTGGAGAGCGATCTGCAGTGGCTGCCAATCGCTGTTCCA
AGCTGCTTGGATTGGTATCCCTATAACTACACACTCTGCCCACCCCATAA
GCCAGAGAATCTTACTGTGACCCAGAAGCAGTATCTGCCAAATATTTTGG
CCCTGAACATCACCTGGGCGCGTCCCAGATACCTGCCGGATAACTATACA
CTTCACATCTTTGATCTATTCAAAGGAGGTACGGAGCTAAACTATACACT
TGACCAAAACAGGAGCCACTTCTATGTACCCAAGATCACGGTACTGGGTT
CCCATTTCGAAGTACATTTGGTGGCCCAGTCGGCAGGCGGAAAAAACGTA
TCCGGTTTGACGTTGGACAAGGTTCATCGAGGTGTGTTGCTGAGCGAGGG
CAACATGGTCAAGTTGGTACTCTTTATTATCGTGCCCATATGCTGCATTT
TGATGCTGTGCTCCCTGACGTTCTGCAGACGAAATCGTTCGGAGGTTCAG
GCGCTGCAAATGGACGCTAAGGACGCGAAGGCCAGTGAATTTCATCTCTC
CCTGATGGACAGCAGTGGCCTGCTGGTCACCCTCTCGGCCAACGAGAGTC
TGGAAGTAATGGACGAGCTGGAGGTGGAGCCACACTCGGTGCTCCTTCAG
GATGTCCTCGGCGAAGGAGCCTTTGGCTTGGTGCGACGTGGAGTTTACAA
GAAACGCCAAGTGGCCGTCAAGTTGCTGAAAGATGAACCAAACGACGAGG
ACGTATATGCGTTCAAGTGCGAAATTCAGATGCTCAAGGCCGTGGGCAAG
CATCCAAATATTGTGGGTATCGTGGGATACTCCACTCGTTTTAGCAACCA
GATGATGTTGCTAATTGAATACTGCAGCCTTGGAAGCCTGCAGAACTTTT
TACGTGAGGAGTGGAAGTTCAGGCAGGAGCAAAATGCAATTGGACTTAAG
AAGAACCTTGAACAGAACGTGGACAACCGACGGTTTAACCGACTCCCTAG
AAATTCCATCCATGATCGCATAGAGGATATCAACAACTCGATGCTGTCCA
CTGTGGAAGAGGAGAGTGAATCGGATCAGACACACTCAAGTCGATGTGAG
ACCTACACCCTCACTCGAATAACCAATGCAGCCGACAACAAGGGCTATGG
CCTGGAGGACATTGAAAACATCGGTGGGAGTTACATTCCCAAAACCGCTG
AAGCTCCAAAGGATCGGCCAAAACGGAAGCTGAAGCCGCAGCCCAAGAAA
GACTCGAAGCAGGATTTCAAATCGGACAACAAGAAGCGAATCTTTGAGAA
CAAGGAATACTTTGATTGCCTCGACTCATCGGATACCAAGCCCCGAATAC
CACTGAAATATGCAGATTTGCTAGACATCGCCCAACAGGTGGCGGTGGGA
ATGGAATTTCTGGCCCAAAACAAAGTAGTGCATAGGGATCTGGCTGCCCG
GAATGTTCTAATCTCCGTAGATCGCAGCATCAAGATAGCAGATTTTGGGC
TGAGTCGAGATGTGTATCATGAGAACGTGTACCGAAAGTCCGGAGGAAGT
GGCAAGCTGCCCATCAAGTGGCTCGCGCTGGAGTCCCTCACCCACCAGGT
GTACACCAGTCAGAGCGATGTTTGGTCCTTTGGTGTGCTGCTCTATGAGA
TCACCACTCTCGGTGGAATGCCATATCCGTCGGTGTCTCCCAGTGATCTC
TTGCAGCTACTGCGACAAGGTCATCGGATGAAGCGACCGGAGGGATGTAC
GCAAGAAATGTTTTCCCTGATGGAAAGCTGCTGGAGCTCCGTGCCATCAC
ACAGGCCAACATTTTCCGCCCTTAAACACAGACTTGGTGGCATGATTTTG
GCCACTAACGATGTTCCAGAAAGGCTGAAACAACTGCAAGCTGCAACCGA
GTCAAAATTAAAGTCATGTGACGGTCTAAACAGTAAAGTGGAGCAAGTGC
CATGCGAGGAAGAGCTATACCTAGAACCTTTGAATGCAAGCTTTCTAGAC
CAT
BO13553.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:49:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tor-RA | 2772 | CG1389-PA | 1..2769 | 17..2785 | 13845 | 100 | Plus |
tor-RD | 2757 | CG1389-PD | 1..2754 | 17..2785 | 13585 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:49:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tor-RA | 3131 | CG1389-RA | 240..3008 | 17..2785 | 13845 | 100 | Plus |
tor-RD | 3116 | CG1389-RD | 240..2993 | 17..2785 | 13585 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:49:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7706181..7706681 | 2204..1704 | 2505 | 100 | Minus |
2R | 25286936 | 2R | 7706971..7707307 | 1532..1196 | 1685 | 100 | Minus |
2R | 25286936 | 2R | 7707363..7707668 | 1196..891 | 1530 | 100 | Minus |
2R | 25286936 | 2R | 7708105..7708343 | 638..400 | 1195 | 100 | Minus |
2R | 25286936 | 2R | 7708495..7708726 | 400..169 | 1160 | 100 | Minus |
2R | 25286936 | 2R | 7706742..7706915 | 1704..1531 | 870 | 100 | Minus |
2R | 25286936 | 2R | 7705416..7705589 | 2733..2560 | 870 | 100 | Minus |
2R | 25286936 | 2R | 7707737..7707905 | 890..722 | 845 | 100 | Minus |
2R | 25286936 | 2R | 7708792..7708945 | 170..17 | 770 | 100 | Minus |
2R | 25286936 | 2R | 7705644..7705783 | 2561..2422 | 700 | 100 | Minus |
2R | 25286936 | 2R | 7705844..7705967 | 2421..2298 | 620 | 100 | Minus |
2R | 25286936 | 2R | 7706019..7706115 | 2299..2203 | 485 | 100 | Minus |
2R | 25286936 | 2R | 7707962..7708045 | 721..638 | 420 | 100 | Minus |
2R | 25286936 | 2R | 7705306..7705359 | 2785..2732 | 270 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 21:49:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 519..749 | 217..445 | 125 | 55.6 | Plus |
BO13553.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:07:23 Download gff for
BO13553.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tor-RC | 305..3082 | 10..2789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:38:07 Download gff for
BO13553.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tor-RA | 240..3008 | 17..2787 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:15:18 Download gff for
BO13553.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tor-RC | 311..3079 | 17..2787 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:43:27 Download gff for
BO13553.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tor-RA | 240..3008 | 17..2787 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:43:27 Download gff for
BO13553.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7705304..7705357 | 2734..2787 | 96 | <- | Minus |
2R | 7705416..7705589 | 2560..2733 | 100 | <- | Minus |
2R | 7705646..7705783 | 2422..2559 | 100 | <- | Minus |
2R | 7705844..7705966 | 2299..2421 | 100 | <- | Minus |
2R | 7706020..7706114 | 2204..2298 | 100 | <- | Minus |
2R | 7706182..7706680 | 1705..2203 | 100 | <- | Minus |
2R | 7706742..7706913 | 1533..1704 | 100 | <- | Minus |
2R | 7706971..7707306 | 1197..1532 | 100 | <- | Minus |
2R | 7707363..7707668 | 891..1196 | 100 | <- | Minus |
2R | 7707737..7707905 | 722..890 | 100 | <- | Minus |
2R | 7707962..7708044 | 639..721 | 100 | <- | Minus |
2R | 7708105..7708342 | 401..638 | 100 | <- | Minus |
2R | 7708495..7708725 | 170..400 | 100 | <- | Minus |
2R | 7708793..7708945 | 17..169 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:38:07 Download gff for
BO13553.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3594247..3594418 | 1533..1704 | 100 | <- | Minus |
arm_2R | 3592809..3592862 | 2734..2787 | 96 | <- | Minus |
arm_2R | 3592921..3593094 | 2560..2733 | 100 | <- | Minus |
arm_2R | 3593151..3593288 | 2422..2559 | 100 | <- | Minus |
arm_2R | 3593349..3593471 | 2299..2421 | 100 | <- | Minus |
arm_2R | 3593525..3593619 | 2204..2298 | 100 | <- | Minus |
arm_2R | 3593687..3594185 | 1705..2203 | 100 | <- | Minus |
arm_2R | 3594476..3594811 | 1197..1532 | 100 | <- | Minus |
arm_2R | 3594868..3595173 | 891..1196 | 100 | <- | Minus |
arm_2R | 3595242..3595410 | 722..890 | 100 | <- | Minus |
arm_2R | 3595467..3595549 | 639..721 | 100 | <- | Minus |
arm_2R | 3595610..3595847 | 401..638 | 100 | <- | Minus |
arm_2R | 3596000..3596230 | 170..400 | 100 | <- | Minus |
arm_2R | 3596298..3596450 | 17..169 | 100 | | Minus |
BO13553.pep Sequence
Translation from 16 to 2803
> BO13553.pep
MLIFYAKYAFIFWFFVGSNQGEMLLMDKISHDKTLLNVTACTQNCLEKGQ
MDFRSCLKDCRINGTFPGALRKVQENYQMNMICRTESEIVFQIDWVQHSR
GTEPAPNATYIIRVDAVKDDNKETALYLSDDNFLILPGLESNSTHNITAL
AMHGDGSYSLIAKDQTFATLIRGYQPSKMGAVNLLRFVPQPDDLHHIAAE
IEWKPSAESNCYFDMVSYSTNSVNMDEPLEVQFRDRKKLYRHTVDNLEFD
KQYHVGVRTVNIMNRLESDLQWLPIAVPSCLDWYPYNYTLCPPHKPENLT
VTQKQYLPNILALNITWARPRYLPDNYTLHIFDLFKGGTELNYTLDQNRS
HFYVPKITVLGSHFEVHLVAQSAGGKNVSGLTLDKVHRGVLLSEGNMVKL
VLFIIVPICCILMLCSLTFCRRNRSEVQALQMDAKDAKASEFHLSLMDSS
GLLVTLSANESLEVMDELEVEPHSVLLQDVLGEGAFGLVRRGVYKKRQVA
VKLLKDEPNDEDVYAFKCEIQMLKAVGKHPNIVGIVGYSTRFSNQMMLLI
EYCSLGSLQNFLREEWKFRQEQNAIGLKKNLEQNVDNRRFNRLPRNSIHD
RIEDINNSMLSTVEEESESDQTHSSRCETYTLTRITNAADNKGYGLEDIE
NIGGSYIPKTAEAPKDRPKRKLKPQPKKDSKQDFKSDNKKRIFENKEYFD
CLDSSDTKPRIPLKYADLLDIAQQVAVGMEFLAQNKVVHRDLAARNVLIS
VDRSIKIADFGLSRDVYHENVYRKSGGSGKLPIKWLALESLTHQVYTSQS
DVWSFGVLLYEITTLGGMPYPSVSPSDLLQLLRQGHRMKRPEGCTQEMFS
LMESCWSSVPSHRPTFSALKHRLGGMILATNDVPERLKQLQAATESKLKS
CDGLNSKVEQVPCEEELYLEPLNASFLDH
BO13553.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 03:02:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tor-PA | 923 | CG1389-PA | 1..923 | 1..923 | 4844 | 100 | Plus |
tor-PD | 918 | CG1389-PD | 1..918 | 1..923 | 4806 | 99.5 | Plus |
Pvr-PO | 1499 | CG8222-PO | 762..1255 | 383..877 | 511 | 29.7 | Plus |
Pvr-PN | 1499 | CG8222-PN | 762..1255 | 383..877 | 511 | 29.7 | Plus |
Pvr-PG | 1468 | CG8222-PG | 766..1224 | 383..877 | 499 | 29.2 | Plus |