Clone Sequence Records
BO13558.5prime Sequence
413 bp (412 high quality bases) assembled on 2006-05-08
> BO13558.5prime
GAAGTTATCAGTCGACATGAGCAGCAATTCCAAGTCGAGATGGAGGAGTT
TGAAACTAGTTTATCAATTTGAAAGTAGCAACGATTTCGGAACAGAAAGA
GATGCAGAAGTCGACACCGGAGAAGGAGAGAATTCAAACCATGAGACTGA
AGTGCATCAGCCAGAGCAAGAGTCCACCGAGGATGAGCGATTCCAATGCC
ACGTCAAGAATGAGTCCATCAACGAAGATCTCTCAGAGGAAGAAGATTAC
AGCGAACTGAGCACATTAAGACTGGAGGACATTGAAGAGAATGTCCTCGA
AGGTACTCCTCGAATCGTTGAGATGCAGGATGACAGCAAAGTGCAACCAA
ACCACAAATACGTCAATGTAAAAATGTTTATTTTATATACATATAAAGCA
AGCTTTCTAGACC
BO13558.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:06:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-PA | 384 | CG15345-RA | 1..381 | 17..397 | 1905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:28:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-RA | 1085 | CG15345-RA | 401..781 | 17..397 | 1905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:27:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8397461..8397841 | 397..17 | 1905 | 100 | Minus |
Blast to na_te.dros performed 2015-02-12 06:27:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bari1 | 1728 | Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). | 1401..1462 | 396..335 | 112 | 68.8 | Minus |
BO13558.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:06:45 Download gff for
BO13558.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-PA | 1..384 | 17..401 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:53:42 Download gff for
BO13558.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-PA | 1..384 | 17..401 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:03:16 Download gff for
BO13558.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 397..785 | 10..402 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:12:47 Download gff for
BO13558.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 397..785 | 10..402 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:12:47 Download gff for
BO13558.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8397457..8397845 | 10..402 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:03:16 Download gff for
BO13558.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8291490..8291878 | 10..402 | 98 | | Minus |
BO13558.3prime Sequence
413 bp (412 high quality bases) assembled on 2006-05-08
> BO13558.3prime
ATGGTCTAGAAAGCTTGCTTTATATGTATATAAAATAAACATTTTTACAT
TGACGTATTTGTGGTTTGGTTGCACTTTGCTGTCATCCTGCATCTCAACG
ATTCGAGGAGTACCTTCGAGGACATTCTCTTCAATGTCCTCCAGTCTTAA
TGTGCTCAGTTCGCTGTAATCTTCTTCCTCTGAGAGATCTTCGTTGATGG
ACTCATTCTTGACGTGGCATTGGAATCGCTCATCCTCGGTGGACTCTTGC
TCTGGCTGATGCACTTCAGTCTCATGGTTTGAATTCTCTCCTTCTCCGGT
GTCGACTTCTGCATCTCTTTCTGTTCCGAAATCGTTGCTACTTTCAAATT
GATAAACTAGTTTCAAACTCCTCCATCTCGACTTGGAATTGCTGCTCATG
TCGACTGATAACT
BO13558.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:06:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-PA | 384 | CG15345-RA | 1..381 | 399..19 | 1905 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:21:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-RA | 1085 | CG15345-RA | 401..781 | 399..19 | 1905 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:21:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8397461..8397841 | 19..399 | 1905 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 04:21:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bari1 | 1728 | Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). | 1401..1462 | 20..81 | 112 | 68.8 | Plus |
BO13558.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:06:44 Download gff for
BO13558.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-PA | 1..384 | 15..399 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:53:41 Download gff for
BO13558.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-PA | 1..384 | 15..399 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 22:44:32 Download gff for
BO13558.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 397..785 | 14..406 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:53:34 Download gff for
BO13558.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 397..785 | 14..406 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:53:34 Download gff for
BO13558.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8397457..8397845 | 14..406 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 22:44:32 Download gff for
BO13558.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8291490..8291878 | 14..406 | 98 | | Plus |
BO13558.complete Sequence
415 bp assembled on 2007-10-17
GenBank Submission: FJ632831
> BO13558.complete
GAAGTTATCAGTCGACATGAGCAGCAATTCCAAGTCGAGATGGAGGAGTT
TGAAACTAGTTTATCAATTTGAAAGTAGCAACGATTTCGGAACAGAAAGA
GATGCAGAAGTCGACACCGGAGAAGGAGAGAATTCAAACCATGAGACTGA
AGTGCATCAGCCAGAGCAAGAGTCCACCGAGGATGAGCGATTCCAATGCC
ACGTCAAGAATGAGTCCATCAACGAAGATCTCTCAGAGGAAGAAGATTAC
AGCGAACTGAGCACATTAAGACTGGAGGACATTGAAGAGAATGTCCTCGA
AGGTACTCCTCGAATCGTTGAGATGCAGGATGACAGCAAAGTGCAACCAA
ACCACAAATACGTCAATGTAAAAATGTTTATTTTATATACATATAAAGCA
AGCTTTCTAGACCAT
BO13558.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:26:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-RA | 384 | CG15345-PA | 1..381 | 17..397 | 1905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:26:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-RA | 1085 | CG15345-RA | 401..781 | 17..397 | 1905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:26:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8397461..8397841 | 397..17 | 1905 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 08:26:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bari1 | 1728 | Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). | 1401..1462 | 396..335 | 112 | 68.8 | Minus |
BO13558.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:02:04 Download gff for
BO13558.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 1..384 | 17..401 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:15:09 Download gff for
BO13558.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 360..748 | 10..402 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:31:23 Download gff for
BO13558.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 401..781 | 17..399 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:41:24 Download gff for
BO13558.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 364..744 | 17..399 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:18:49 Download gff for
BO13558.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 401..781 | 17..399 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:18:49 Download gff for
BO13558.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8397459..8397841 | 17..399 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:31:23 Download gff for
BO13558.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8291492..8291874 | 17..399 | 99 | | Minus |
BO13558.pep Sequence
Translation from 16 to 415
> BO13558.pep
MSSNSKSRWRSLKLVYQFESSNDFGTERDAEVDTGEGENSNHETEVHQPE
QESTEDERFQCHVKNESINEDLSEEEDYSELSTLRLEDIEENVLEGTPRI
VEMQDDSKVQPNHKYVNVKMFILYTYKASFLDH
BO13558.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:37:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-PA | 127 | CG15345-PA | 1..127 | 1..127 | 663 | 100 | Plus |