Clone BO13567 Report

Search the DGRC for BO13567

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:135
Well:67
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO13567.pep: validated full length
Sequenced Size:1414

Clone Sequence Records

BO13567.3prime Sequence

875 bp (741 high quality bases) assembled on 2006-05-08

> BO13567.3prime
ATGGTCTAGAAAGCTTGCTCGCCTGGCATCATCTATTCCTTCGGAAATGG
GACGAATCATCCAACGAACCCGTTTCAGCGAATTCTGCCCTGAAAAGGTG
TCCCACCAGATCCCAGTTTCTCCAGGTTGGTTCTGGGTGGTATATTCGCC
GAATAAGTTGCTCTTTGCGCAGTTGTTAAACCATCCAGCTCCCTTGTGTC
TCAGGGCGCAATTGCACTCCAGGCAGTTGTCATTATCCTGATCCACAGTG
CTAAACTTAGCTCCAGCATGATAGGACAATGAATCTCCAGCTGAAGGAGT
CAAATTATCCTGGAATTTGCCCAGCAAGACGAGTGGATATAGTTCCTTTT
CGCTGCCAATGGCAAACAACGAATATCCCGCATACGCCACGTTGCCCGAG
AAGTCCTCCATCACAATCCGCAGTTCGTGCAAGGCCGATGAAGTGAGGGC
ATGCAGTTTGTTGAGACCAATAAAGAAGTCCCCAGCCAAATTGCCAAAGC
CATCGCGATAATCCAGCCAGCCGCGTTCGAAGTTCACATCATCGGAGGTG
CGGCTCAAAATAACAGTCCAATCCTCATCGCAGGATACGTAGAAGGATTC
CGATTCGGGTGTGAGCTGTACTTTTAGAATTCCGTGGTTAGAAAGGAAGG
AATAGGAGCAACTACTAGGCAACTGCCGTGTAGCTGTTGGTCCATTTAAT
CCACTTGGACCGTAGAAGATTGGCTGCTGACCTGGTGTCGACCTNCATCC
CTTACCCTGGATCAAACGGCTTTGGCGCCTAATGGCCCGTGAAAGATTGG
CCACTTCAACCTGCACAGATCTGACACTGAGAGCAGTAGAAGCCAAAAGC
GTGGCCAAGGCATCCAGACGACTTG

BO13567.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:06:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG10359-PA 1383 CG10359-RA 524..1380 875..19 4241 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:20:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG10359-RE 1762 CG10359-RE 732..1588 875..19 4259 99.8 Minus
CG10359-RG 1684 CG10359-RG 654..1510 875..19 4259 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:20:40
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3614307..3615070 782..19 3794 99.7 Minus
3L 28110227 3L 3614157..3614254 875..778 490 100 Minus
Blast to na_te.dros performed on 2015-02-10 15:20:44 has no hits.

BO13567.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:06:58 Download gff for BO13567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10359-PA 524..1383 18..875 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:54:01 Download gff for BO13567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10359-PA 524..1383 18..875 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:54:31 Download gff for BO13567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 654..1510 19..875 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:52:54 Download gff for BO13567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 654..1510 19..875 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:52:54 Download gff for BO13567.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 3614311..3615070 19..778 99   Minus
3L 3614157..3614253 779..875 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:54:31 Download gff for BO13567.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3614157..3614253 779..875 100 -> Minus
arm_3L 3614311..3615070 19..778 99   Minus

BO13567.5prime Sequence

903 bp (834 high quality bases) assembled on 2006-05-08

> BO13567.5prime
GAAGTTATCAGTCGACATGATGAGGCCCCAATTAGCGGCCATAGCCACTG
TCATGGTGCTGGCTGCGATCTGCGGTTTTGGCACTGGTTCCGTGCTGGAA
GTACCCGGAGTCACCCAGGCACCACCACTCCCACCTCGTAACCTCCGAAA
CAACCAAACGCGGTCGCGCATTCCCAACAACTTCCGAAGCATTGCGACCC
CACCAATTGCTCCCAGATGCGACTACAAGGAGCTGATGACCAATCTGCAC
GATCGCGTTGGCATCTTGGTGACCTTGGACGAGGACCAGCGCCACCGGCT
GGAAGTCATCGATAAGAAATTGGATCAGCTGGTGGAAAGCAGTTCGGCCC
GCATGGAATCGATGAAGGCCCAGCAATTGGACTTCCTGCACAGACTGGAC
AGTTTTGAGCACATCCAGCGGCTTTCGAGGAACACTCTAGATGAGCTTAA
AGATATCTCGCGCACTGTTCGTGACGTTTCCCAGGAACAGTATCCCAGCT
CGGGAATAGGTACATTTAATGAATCCAACTTGAATTTATCAAGTCGTCTG
GATGCCTTGGCCACGCTTTTGGCTTCTACTGCTCTCAGTGTCAGATCTGT
GCAGGTTGAAGTGGCCAATCTTTCACGGGCCATTAGGCGCCAAAGCCGTT
TGATCCAGGGTAAGGGATTGAGGTCGACACCAGGTCAGCAGCCAATCTTC
TACGGTCCAAGTGGATTAAATGGACCAACAGCTACACGGCAGTTGCCTAG
TAGTTGCTCCTATTCCTTCCTTTCTAACCACGGAATTCTAAAAGTACAGC
TCACACCCGAATCGGAATCCTTCTACGTATCCTGCGATGAGGATTGGACT
GTTATTTTGAGCCGCACCTCCGATGATGTGAACTTCGAACGCGGCTGGCT
GGA

BO13567.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:06:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG10359-PA 1383 CG10359-RA 1..887 17..903 4435 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:48:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG10359-RG 1684 CG10359-RG 128..1017 14..903 4450 100 Plus
CG10359-RE 1762 CG10359-RE 644..1095 452..903 2260 100 Plus
CG10359-RE 1762 CG10359-RE 128..566 14..452 2195 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 23:48:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3614307..3614577 633..903 1355 100 Plus
3L 28110227 3L 3614068..3614254 451..637 935 100 Plus
3L 28110227 3L 3612319..3612492 14..187 870 100 Plus
3L 28110227 3L 3613749..3613882 319..452 670 100 Plus
3L 28110227 3L 3613075..3613205 188..318 655 100 Plus
Blast to na_te.dros performed on 2015-02-09 23:48:24 has no hits.

BO13567.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:06:59 Download gff for BO13567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10359-PA 1..886 17..902 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:54:02 Download gff for BO13567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10359-PA 1..886 17..902 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:30:21 Download gff for BO13567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 125..1016 10..902 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:58:30 Download gff for BO13567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 125..1016 10..902 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:58:30 Download gff for BO13567.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3612316..3612492 10..187 99 -> Plus
3L 3613075..3613205 188..318 100 -> Plus
3L 3613749..3613882 319..452 100 -> Plus
3L 3614070..3614253 453..636 100 -> Plus
3L 3614311..3614576 637..902 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:30:21 Download gff for BO13567.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3613749..3613882 319..452 100 -> Plus
arm_3L 3612316..3612492 10..187 99 -> Plus
arm_3L 3613075..3613205 188..318 100 -> Plus
arm_3L 3614070..3614253 453..636 100 -> Plus
arm_3L 3614311..3614576 637..902 100   Plus

BO13567.complete Sequence

1414 bp assembled on 2007-07-13

GenBank Submission: FJ632835

> BO13567.complete
GAAGTTATCAGTCGACATGATGAGGCCCCAATTAGCGGCCATAGCCACTG
TCATGGTGCTGGCTGCGATCTGCGGTTTTGGCACTGGTTCCGTGCTGGAA
GTACCCGGAGTCACCCAGGCACCACCACTCCCACCTCGTAACCTCCGAAA
CAACCAAACGCGGTCGCGCATTCCCAACAACTTCCGAAGCATTGCGACCC
CACCAATTGCTCCCAGATGCGACTACAAGGAGCTGATGACCAATCTGCAC
GATCGCGTTGGCATCTTGGTGACCTTGGACGAGGACCAGCGCCACCGGCT
GGAAGTCATCGATAAGAAATTGGATCAGCTGGTGGAAAGCAGTTCGGCCC
GCATGGAATCGATGAAGGCCCAGCAATTGGACTTCCTGCACAGACTGGAC
AGTTTTGAGCACATCCAGCGGCTTTCGAGGAACACTCTAGATGAGCTTAA
AGATATCTCGCGCACTGTTCGTGACGTTTCCCAGGAACAGTATCCCAGCT
CGGGAATAGGTACATTTAATGAATCCAACTTGAATTTATCAAGTCGTCTG
GATGCCTTGGCCACGCTTTTGGCTTCTACTGCTCTCAGTGTCAGATCTGT
GCAGGTTGAAGTGGCCAATCTTTCACGGGCCATTAGGCGCCAAAGCCGTT
TGATCCAGGGTAAGGGATTGAGGTCGACACCAGGTCAGCAGCCAATCTTC
TACGGTCCAAGTGGATTAAATGGACCAACAGCTACACGGCAGTTGCCTAG
TAGTTGCTCCTATTCCTTCCTTTCTAACCACGGAATTCTAAAAGTACAGC
TCACACCCGAATCGGAATCCTTCTACGTATCCTGCGATGAGGATTGGACT
GTTATTTTGAGCCGCACCTCCGATGATGTGAACTTCGAACGCGGCTGGCT
GGATTATCGCGATGGCTTTGGCAATTTGGCTGGGGACTTCTTTATTGGTC
TCAACAAACTGCATGCCCTCACTTCATCGGCCTTGCACGAACTGCGGATT
GTGATGGAGGACTTCTCGGGCAACGTGGCGTATGCGGGATATTCGTTGTT
TGCCATTGGCAGCGAAAAGGAACTATATCCACTCGTCTTGCTGGGCAAAT
TCCAGGATAATTTGACTCCTTCAGCTGGAGATTCATTGTCCTATCATGCT
GGAGCTAAGTTTAGCACTGTGGATCAGGATAATGACAACTGCCTGGAGTG
CAATTGCGCCCTGAGACACAAGGGAGCTGGATGGTTTAACAACTGCGCAA
AGAGCAACTTATTCGGCGAATATACCACCCAGAACCAACCTGGAGAAACT
GGGATCTGGTGGGACACCTTTTCAGGGCAGAATTCGCTGAAACGGGTTCG
TTGGATGATTCGTCCCATTTCCGAAGGAATAGATGATGCCAGGCGAGCAA
GCTTTCTAGACCAT

BO13567.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:53:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG10359-RG 1380 CG10359-PG 1..1377 20..1396 6885 100 Plus
CG10359-RE 1458 CG10359-PE 511..1455 452..1396 4725 100 Plus
CG10359-RE 1458 CG10359-PE 1..433 20..452 2165 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:53:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG10359-RG 1684 CG10359-RG 128..1510 14..1396 6915 100 Plus
CG10359-RE 1762 CG10359-RE 644..1588 452..1396 4725 100 Plus
CG10359-RE 1762 CG10359-RE 128..566 14..452 2195 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:53:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3614307..3615070 633..1396 3820 100 Plus
3L 28110227 3L 3614068..3614254 451..637 935 100 Plus
3L 28110227 3L 3612319..3612492 14..187 870 100 Plus
3L 28110227 3L 3613749..3613882 319..452 670 100 Plus
3L 28110227 3L 3613075..3613205 188..318 655 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:53:56 has no hits.

BO13567.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:50 Download gff for BO13567.complete
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 1..1380 20..1397 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:24:11 Download gff for BO13567.complete
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 123..1508 10..1396 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:15:22 Download gff for BO13567.complete
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 131..1510 17..1398 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:50 Download gff for BO13567.complete
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 123..1508 10..1396 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:30:30 Download gff for BO13567.complete
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 131..1510 17..1398 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:30:30 Download gff for BO13567.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3612322..3612492 17..187 100 -> Plus
3L 3613075..3613205 188..318 100 -> Plus
3L 3613749..3613882 319..452 100 -> Plus
3L 3614070..3614253 453..636 100 -> Plus
3L 3614311..3615070 637..1398 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:15:22 Download gff for BO13567.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3612322..3612492 17..187 100 -> Plus
arm_3L 3613075..3613205 188..318 100 -> Plus
arm_3L 3613749..3613882 319..452 100 -> Plus
arm_3L 3614070..3614253 453..636 100 -> Plus
arm_3L 3614311..3615070 637..1398 99   Plus

BO13567.pep Sequence

Translation from 16 to 1414

> BO13567.pep
MMRPQLAAIATVMVLAAICGFGTGSVLEVPGVTQAPPLPPRNLRNNQTRS
RIPNNFRSIATPPIAPRCDYKELMTNLHDRVGILVTLDEDQRHRLEVIDK
KLDQLVESSSARMESMKAQQLDFLHRLDSFEHIQRLSRNTLDELKDISRT
VRDVSQEQYPSSGIGTFNESNLNLSSRLDALATLLASTALSVRSVQVEVA
NLSRAIRRQSRLIQGKGLRSTPGQQPIFYGPSGLNGPTATRQLPSSCSYS
FLSNHGILKVQLTPESESFYVSCDEDWTVILSRTSDDVNFERGWLDYRDG
FGNLAGDFFIGLNKLHALTSSALHELRIVMEDFSGNVAYAGYSLFAIGSE
KELYPLVLLGKFQDNLTPSAGDSLSYHAGAKFSTVDQDNDNCLECNCALR
HKGAGWFNNCAKSNLFGEYTTQNQPGETGIWWDTFSGQNSLKRVRWMIRP
ISEGIDDARRASFLDH

BO13567.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:10:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG10359-PG 459 CG10359-PG 1..459 2..460 2385 100 Plus
CG10359-PE 485 CG10359-PE 1..485 2..460 2348 94.6 Plus
CG1791-PC 333 CG1791-PC 54..332 185..453 413 38.9 Plus
CG1791-PA 334 CG1791-PA 54..333 185..453 412 38.8 Plus
CG9500-PA 272 CG9500-PA 33..266 219..450 396 40.9 Plus