Clone Sequence Records
BO13594.3prime Sequence
446 bp (445 high quality bases) assembled on 2006-05-08
> BO13594.3prime
ATGGTCTAGAAAGCTTGCCACAATGGGCTCGCATTGTTTCAATTCTTTGC
GTGTTTTGAATCCCCGGAAGCCAGCCTGAATTTTAACAGCGGCATCGGTG
GCGATTTTCTGCTTCTTTCGCACCAGGAATCCCCGGAATCCCGCCTGTAT
CTTGGTGGCACTACGATCCTCCACGGATTTACCACCATTCTCGGTGGCCG
TATGCTGATCCTCGCCGCTGGGACGGGGATTTCCCGTATTGTTCTGGTTT
TCCATGAGGCCGTTGTTCTTTGGACGCTGTCGCTGATTCCGCCTGGGATG
GGGATTCTTGCTGGATCGATGGATCTCTTTGCGCACACGGTAGCCACGAA
ATCCGGCCTGAATCTTAATGGCCGCACTCTCTTCGGACTGCAAGGACGAT
GCTGATTCCGGTGAGCTGGGGTAAATGTACATGTCGACTGATAACT
BO13594.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:07:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14687-PA | 417 | CG14687-RA | 1..414 | 432..19 | 2070 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:51:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14687-RA | 740 | CG14687-RA | 129..543 | 433..19 | 2075 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:51:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10793032..10793446 | 433..19 | 2075 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:51:37 has no hits.
BO13594.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:07:41 Download gff for
BO13594.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-PA | 1..417 | 15..432 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:55:06 Download gff for
BO13594.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-PA | 1..417 | 15..432 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 20:33:17 Download gff for
BO13594.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-RA | 121..553 | 10..440 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:22:01 Download gff for
BO13594.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-RA | 121..553 | 10..440 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:22:01 Download gff for
BO13594.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10793024..10793456 | 10..440 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 20:33:17 Download gff for
BO13594.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6618746..6619178 | 10..440 | 98 | | Minus |
BO13594.5prime Sequence
446 bp (445 high quality bases) assembled on 2006-05-08
> BO13594.5prime
GAAGTTATCAGTCGACATGTACATTTACCCCAGCTCACCGGAATCAGCAT
CGTCCTTGCAGTCCGAAGAGAGTGCGGCCATTAAGATTCAGGCCGGATTT
CGTGGCTACCGTGTGCGCAAAGAGATCCATCGATCCAGCAAGAATCCCCA
TCCCAGGCGGAATCAGCGACAGCGTCCAAAGAACAACGGCCTCATGGAAA
ACCAGAACAATACGGGAAATCCCCGTCCCAGCGGCGAGGATCAGCATACG
GCCACCGAGAATGGTGGTAAATCCGTGGAGGATCGTAGTGCCACCAAGAT
ACAGGCGGGATTCCGGGGATTCCTGGTGCGAAAGAAGCAGAAAATCGCCA
CCGATGCCGCTGTTAAAATTCAGGCTGGCTTCCGGGGATTCAAAACACGC
AAAGAATTGAAACAATGCGAGCCCATTGTGGCAAGCTTTCTAGACC
BO13594.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:07:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14687-PA | 417 | CG14687-RA | 1..414 | 17..430 | 2070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:51:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14687-RA | 740 | CG14687-RA | 129..543 | 16..430 | 2075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:51:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10793032..10793446 | 16..430 | 2075 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 11:51:44 has no hits.
BO13594.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:07:42 Download gff for
BO13594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-PA | 1..417 | 17..434 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:55:07 Download gff for
BO13594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-PA | 1..417 | 17..434 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 20:33:19 Download gff for
BO13594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-RA | 121..553 | 9..439 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:22:21 Download gff for
BO13594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-RA | 121..553 | 9..439 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:22:21 Download gff for
BO13594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10793024..10793456 | 9..439 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 20:33:19 Download gff for
BO13594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6618746..6619178 | 9..439 | 98 | | Plus |
BO13594.complete Sequence
448 bp assembled on 2006-10-11
GenBank Submission: FJ632849
> BO13594.complete
GAAGTTATCAGTCGACATGTACATTTACCCCAGCTCACCGGAATCAGCAT
CGTCCTTGCAGTCCGAAGAGAGTGCGGCCATTAAGATTCAGGCCGGATTT
CGTGGCTACCGTGTGCGCAAAGAGATCCATCGATCCAGCAAGAATCCCCA
TCCCAGGCGGAATCAGCGACAGCGTCCAAAGAACAACGGCCTCATGGAAA
ACCAGAACAATACGGGAAATCCCCGTCCCAGCGGCGAGGATCAGCATACG
GCCACCGAGAATGGTGGTAAATCCGTGGAGGATCGTAGTGCCACCAAGAT
ACAGGCGGGATTCCGGGGATTCCTGGTGCGAAAGAAGCAGAAAATCGCCA
CCGATGCCGCTGTTAAAATTCAGGCTGGCTTCCGGGGATTCAAAACACGC
AAAGAATTGAAACAATGCGAGCCCATTGTGGCAAGCTTTCTAGACCAT
BO13594.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:11:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14687-RA | 417 | CG14687-PA | 1..414 | 17..430 | 2070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:11:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14687-RA | 740 | CG14687-RA | 129..543 | 16..430 | 2075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:11:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10793032..10793446 | 16..430 | 2075 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:11:35 has no hits.
BO13594.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:58:51 Download gff for
BO13594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-RA | 1..417 | 17..434 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:06:47 Download gff for
BO13594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-RA | 119..551 | 9..439 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:47:16 Download gff for
BO13594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-RA | 130..543 | 17..432 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:58:51 Download gff for
BO13594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-RA | 119..551 | 9..439 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:16:04 Download gff for
BO13594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-RA | 130..543 | 17..432 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:16:04 Download gff for
BO13594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10793033..10793446 | 17..432 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:47:16 Download gff for
BO13594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6618755..6619168 | 17..432 | 99 | | Plus |
BO13594.pep Sequence
Translation from 16 to 448
> BO13594.pep
MYIYPSSPESASSLQSEESAAIKIQAGFRGYRVRKEIHRSSKNPHPRRNQ
RQRPKNNGLMENQNNTGNPRPSGEDQHTATENGGKSVEDRSATKIQAGFR
GFLVRKKQKIATDAAVKIQAGFRGFKTRKELKQCEPIVASFLDH
BO13594.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:19:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14687-PA | 138 | CG14687-PA | 1..138 | 1..138 | 713 | 100 | Plus |
