Clone Sequence Records
BO13631.3prime Sequence
462 bp (461 high quality bases) assembled on 2006-05-08
> BO13631.3prime
ATGGTCTAGAAAGCTTGCGTTCTTCTGGACGGCGGCCTGCACGAGGGGCA
GGTTCTTGCCAAGGAAACACTTGAAGCCACGGAAGGCCCATTCGTTGGCG
GGCGACTTCTGCTCGTTCTTGTCGGCGCACTTCTCGATGTCGGCCTTCAG
CGCGGCCTTGTCCTCCTTGCCCTGGCCCAGTTGCGCCACCAGGTTCTCCA
CCTTGAAGCCCTTGGCCTCATCGAACAGGTCGAATTTGACGAAGATGCAC
TGGATGTAGTTGCGGGTGATGTCATCGTCGGGATAGTCGAAGGTCTTGTA
CTTGGCGATCAGGGCCTCGGTCACCTTGCTGCTGGCGGCACACTCCTTGC
GCGCGCTCTGCAGATCCTCGGCGGTGCGCAGCTTGTAGTCGGAGGCAGAG
GCCAGACCCAGCAGGGCGCACAGCAGAATAGCAACAGCGTTCTTCATGTC
CGACTGATAACT
BO13631.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:08:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2297-PA | 432 | Obp44a-RA | 1..429 | 447..19 | 2145 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:26:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp44a-RB | 1076 | CG2297-RB | 304..733 | 448..19 | 2150 | 100 | Minus |
| Obp44a-RA | 648 | CG2297-RA | 76..505 | 448..19 | 2150 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:25:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8134513..8134897 | 19..403 | 1925 | 100 | Plus |
| 2R | 25286936 | 2R | 8134966..8135012 | 402..448 | 235 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 12:26:02 has no hits.
BO13631.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:08:41 Download gff for
BO13631.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2297-PA | 1..432 | 18..447 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:56:30 Download gff for
BO13631.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2297-PA | 1..432 | 18..447 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:14:58 Download gff for
BO13631.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp44a-RA | 72..505 | 19..453 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:10:34 Download gff for
BO13631.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp44a-RA | 72..505 | 19..453 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:10:34 Download gff for
BO13631.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8134513..8134896 | 19..402 | 100 | <- | Plus |
| 2R | 8134967..8135016 | 403..453 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:14:58 Download gff for
BO13631.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4022018..4022401 | 19..402 | 100 | <- | Plus |
| arm_2R | 4022472..4022521 | 403..453 | 94 | | Plus |
BO13631.5prime Sequence
462 bp (461 high quality bases) assembled on 2006-05-08
> BO13631.5prime
GAAGTTATCAGTCGGACATGAAGAACGCTGTTGCTATTCTGCTGTGCGCC
CTGCTGGGTCTGGCCTCTGCCTCCGACTACAAGCTGCGCACCGCCGAGGA
TCTGCAGAGCGCGCGCAAGGAGTGTGCCGCCAGCAGCAAGGTGACCGAGG
CCCTGATCGCCAAGTACAAGACCTTCGACTATCCCGACGATGACATCACC
CGCAACTACATCCAGTGCATCTTCGTCAAATTCGACCTGTTCGATGAGGC
CAAGGGCTTCAAGGTGGAGAACCTGGTGGCGCAACTGGGCCAGGGCAAGG
AGGACAAGGCCGCGCTGAAGGCCGACATCGAGAAGTGCGCCGACAAGAAC
GAGCAGAAGTCGCCCGCCAACGAATGGGCCTTCCGTGGCTTCAAGTGTTT
CCTTGGCAAGAACCTGCCCCTCGTGCAGGCCGCCGTCCAGAAGAACGCAA
GCTTTCTAGACC
BO13631.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:08:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2297-PA | 432 | Obp44a-RA | 1..429 | 18..446 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:30:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp44a-RB | 1076 | CG2297-RB | 304..733 | 17..446 | 2150 | 100 | Plus |
| Obp44a-RA | 648 | CG2297-RA | 76..505 | 17..446 | 2150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:30:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8134513..8134897 | 446..62 | 1925 | 100 | Minus |
| 2R | 25286936 | 2R | 8134966..8135012 | 63..17 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 06:30:37 has no hits.
BO13631.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:08:42 Download gff for
BO13631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2297-PA | 1..432 | 18..447 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:56:31 Download gff for
BO13631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2297-PA | 1..432 | 18..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:03:34 Download gff for
BO13631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp44a-RA | 72..505 | 12..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:06:31 Download gff for
BO13631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp44a-RA | 72..505 | 12..446 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:06:31 Download gff for
BO13631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8134513..8134896 | 63..446 | 100 | <- | Minus |
| 2R | 8134967..8135016 | 12..62 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:03:34 Download gff for
BO13631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4022018..4022401 | 63..446 | 100 | <- | Minus |
| arm_2R | 4022472..4022521 | 12..62 | 94 | | Minus |
BO13631.complete Sequence
464 bp assembled on 2011-06-28
GenBank Submission: KX799487
> BO13631.complete
GAAGTTATCAGTCGGACATGAAGAACGCTGTTGCTATTCTGCTGTGCGCC
CTGCTGGGTCTGGCCTCTGCCTCCGACTACAAGCTGCGCACCGCCGAGGA
TCTGCAGAGCGCGCGCAAGGAGTGTGCCGCCAGCAGCAAGGTGACCGAGG
CCCTGATCGCCAAGTACAAGACCTTCGACTATCCCGACGATGACATCACC
CGCAACTACATCCAGTGCATCTTCGTCAAATTCGACCTGTTCGATGAGGC
CAAGGGCTTCAAGGTGGAGAACCTGGTGGCGCAACTGGGCCAGGGCAAGG
AGGACAAGGCCGCGCTGAAGGCCGACATCGAGAAGTGCGCCGACAAGAAC
GAGCAGAAGTCGCCCGCCAACGAATGGGCCTTCCGTGGCTTCAAGTGTTT
CCTTGGCAAGAACCTGCCCCTCGTGCAGGCCGCCGTCCAGAAGAACGCAA
GCTTTCTAGACCAT
BO13631.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:18:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp44a-RB | 432 | CG2297-PB | 1..429 | 18..446 | 2145 | 100 | Plus |
| Obp44a-RA | 432 | CG2297-PA | 1..429 | 18..446 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp44a-RB | 1076 | CG2297-RB | 304..733 | 17..446 | 2150 | 100 | Plus |
| Obp44a-RA | 648 | CG2297-RA | 76..505 | 17..446 | 2150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8134513..8134897 | 446..62 | 1925 | 100 | Minus |
| 2R | 25286936 | 2R | 8134966..8135012 | 63..17 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:18:35 has no hits.
BO13631.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:16:31 Download gff for
BO13631.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp44a-RA | 72..501 | 17..448 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:57:35 Download gff for
BO13631.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp44a-RA | 76..505 | 17..448 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:16:07 Download gff for
BO13631.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp44a-RA | 76..505 | 17..448 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:16:07 Download gff for
BO13631.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8134511..8134896 | 63..448 | 99 | <- | Minus |
| 2R | 8134967..8135012 | 17..62 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:57:35 Download gff for
BO13631.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4022016..4022401 | 63..448 | 99 | <- | Minus |
| arm_2R | 4022472..4022517 | 17..62 | 100 | | Minus |
BO13631.pep Sequence
Translation from 17 to 464
> BO13631.pep
MKNAVAILLCALLGLASASDYKLRTAEDLQSARKECAASSKVTEALIAKY
KTFDYPDDDITRNYIQCIFVKFDLFDEAKGFKVENLVAQLGQGKEDKAAL
KADIEKCADKNEQKSPANEWAFRGFKCFLGKNLPLVQAAVQKNASFLDH
BO13631.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:51:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp44a-PB | 143 | CG2297-PB | 1..143 | 1..143 | 732 | 100 | Plus |
| Obp44a-PA | 143 | CG2297-PA | 1..143 | 1..143 | 732 | 100 | Plus |
| Obp99a-PB | 142 | CG18111-PB | 3..142 | 5..144 | 280 | 41.8 | Plus |
| Obp99a-PA | 142 | CG18111-PA | 3..142 | 5..144 | 280 | 41.8 | Plus |
| Obp99b-PB | 149 | CG7592-PB | 3..148 | 7..141 | 216 | 34.9 | Plus |
