Clone Sequence Records
BO13645.3prime Sequence
832 bp (763 high quality bases) assembled on 2006-05-08
> BO13645.3prime
ATGGTCTAGAAAGCTTGCGGTTTTCGCAATATTTTGTCTATGATTAACCC
AGGCATCTTTGGACTTGCGCATCTTGCCGAGAATCTTGTCCATAACTAAG
CTATGGTTAAAACTGAGGAAATCCTGTCGCATCTCCGGCCATTCCTCATC
CGCAGCCGTCTGACAACTCTGTGCGTCGCTTTCTTCAACTTCCGCATTTG
AACTAGAGTAACTGTGCTGAAGATCGATTTTGGACAGAACCTCGTGGACC
TGATGGAGACCAGTGCTCGTTTTGTCCCGGACAAACTTGATCTTTGGCAC
TTCGCCCATCAGATGGAGCTGCGATAGCTCGTGCTGCAGTTTGCCGCTCA
TGCGATTCAATGTGTTCTCGAGCTCTTGGTTCTCCCCGCCATCCTTGCCC
ATCCAATAGACATTGATGCGGGAGAAGTCGCTGGTGATCTTGACATAGGA
AATCTGCACTCCGTGTCCCACGATGGAATCGGCAACTGCGCCGGTGGCCA
GAATATCAGTGATGTTCGTCATGAACAACTTGTTCAGAACAGACATGCGT
CGATTGTTGTGGCTGCAAGTTGTCTTCGAGTGTGGGGTTCCAAACTTTAA
GGCGTGCAGCGACTTTTGATTGCCTGATGTTCCTGCATCGGGCGATGGAT
ACCAATGGCTTTTGCTGCCTTTAAGCCGATTTCCAAACAACGAGCCAAAT
ATTTTTCCCTGTCGCGTTACGTTGTCTTTTGCTCGACCTTTTGGAGCTCT
TGTTTCGCGAAAGTGCCAATTGGCAGGCGTTGTTAAAAACGGAGTGTCCA
TTTTGTAGCCTTAAAAACACGAATGCTTAACA
BO13645.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:08:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15916-PA | 816 | CG15916-RA | 103..813 | 729..19 | 3555 | 100 | Minus |
| CG15916-PA | 816 | CG15916-RA | 17..105 | 816..728 | 420 | 98.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:35:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15916-RA | 959 | CG15916-RA | 85..896 | 832..19 | 4005 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:35:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15890673..15891484 | 832..19 | 3955 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:35:08 has no hits.
BO13645.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:09:08 Download gff for
BO13645.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-PA | 3..816 | 15..831 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:57:07 Download gff for
BO13645.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-PA | 3..816 | 15..831 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:21:44 Download gff for
BO13645.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-RA | 86..903 | 10..831 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:40:05 Download gff for
BO13645.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-RA | 86..903 | 10..831 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:40:05 Download gff for
BO13645.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15890674..15891491 | 10..831 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:21:44 Download gff for
BO13645.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15784707..15785524 | 10..831 | 99 | | Minus |
BO13645.5prime Sequence
809 bp (744 high quality bases) assembled on 2006-05-08
> BO13645.5prime
GAAGTTATCAGTCGACATGTTAAGCATTCGTGTTTTAAGGCTACAAAATG
GACACTCCGTTCTTAACAACGCCTGCCAATTGGCACTTTCGCGAAACAAG
AGCTCCAAAAGGTCGAGCAAAGACAACGTAACGCGACAGGGAAAAATATT
TGGCTCGTTGTTTGGAAATCGGCTTAAAGGCAGCAAAAGCCATTGGTATC
CATCGCCCGATGCAGGAACATCAGGCAATCAAAAGTCGCTGCACGCCTTA
AAGTTTGGAACCCCACACTCGAAGACAACTTGCAGCCACAACAATCGACG
CATGTCTGTTCTGAACAAGTTGTTCATGACGAACATCACTGATATTCTGG
CCACCGGCGCAGTTGCCGATTCCATCGTGGGACACGGAGTGCAGATTTCC
TATGTCAAGATCACCAGCGACTTCTCCCGCATCAATGTCTATTGGATGGG
CAAGGATGGCGGGGAGAACCAAGAGCTCGAGAACACATTGAATCGCATGA
GCGGCAAACTGCAGCACGAGCTATCGCAGCTCCATCTGATGGGCGAAGTG
CCAAAGATCAAGTTTGTCCGGGACAAAACGAGCACTGGTCTCCATCAGGT
CCACGAGGTTCTGTCCAAAATCGATCTTCAGCACAGTTACTCTAGTTCAA
ATGCGGAAGTTGAAGAAAGCGACGCACAGAGTTGTCAGACGGCTGCGGAT
GAGGAATGGCCGGAGATGCGACAGGATTTCCTCAGTTTTAACCATAGCTT
AGTTATGGACAAGATTCTCGGCAAGATGCGCAAGTCCAAAGATGCCTGGG
TTAATCATA
BO13645.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:08:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15916-PA | 816 | CG15916-RA | 1..793 | 17..809 | 3965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:33:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15916-RA | 959 | CG15916-RA | 84..876 | 17..809 | 3965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:32:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15890672..15891464 | 17..809 | 3965 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:33:01 has no hits.
BO13645.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:09:09 Download gff for
BO13645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-PA | 1..792 | 17..808 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:57:08 Download gff for
BO13645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-PA | 1..792 | 17..808 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:03:49 Download gff for
BO13645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-RA | 77..875 | 10..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:16:28 Download gff for
BO13645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-RA | 77..875 | 10..808 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:16:28 Download gff for
BO13645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15890665..15891463 | 10..808 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:03:49 Download gff for
BO13645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15784698..15785496 | 10..808 | 99 | | Plus |
BO13645.complete Sequence
847 bp assembled on 2006-10-11
GenBank Submission: FJ632883
> BO13645.complete
GAAGTTATCAGTCGACATGTTAAGCATTCGTGTTTTAAGGCTACAAAATG
GACACTCCGTTCTTAACAACGCCTGCCAATTGGCACTTTCGCGAAACAAG
AGCTCCAAAAGGTCGAGCAAAGACAACGTAACGCGACAGGGAAAAATATT
TGGCTCGTTGTTTGGAAATCGGCTTAAAGGCAGCAAAAGCCATTGGTATC
CATCGCCCGATGCAGGAACATCAGGCAATCAAAAGTCGCTGCACGCCTTA
AAGTTTGGAACCCCACACTCGAAGACAACTTGCAGCCACAACAATCGACG
CATGTCTGTTCTGAACAAGTTGTTCATGACGAACATCACTGATATTCTGG
CCACCGGCGCAGTTGCCGATTCCATCGTGGGACACGGAGTGCAGATTTCC
TATGTCAAGATCACCAGCGACTTCTCCCGCATCAATGTCTATTGGATGGG
CAAGGATGGCGGGGAGAACCAAGAGCTCGAGAACACATTGAATCGCATGA
GCGGCAAACTGCAGCACGAGCTATCGCAGCTCCATCTGATGGGCGAAGTG
CCAAAGATCAAGTTTGTCCGGGACAAAACGAGCACTGGTCTCCATCAGGT
CCACGAGGTTCTGTCCAAAATCGATCTTCAGCACAGTTACTCTAGTTCAA
ATGCGGAAGTTGAAGAAAGCGACGCACAGAGTTGTCAGACGGCTGCGGAT
GAGGAATGGCCGGAGATGCGACAGGATTTCCTCAGTTTTAACCATAGCTT
AGTTATGGACAAGATTCTCGGCAAGATGCGCAAGTCCAAAGATGCCTGGG
TTAATCATAGACAAAATATTGCGAAAACCGCAAGCTTTCTAGACCAT
BO13645.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:31:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15916-RA | 816 | CG15916-PA | 1..813 | 17..829 | 4065 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:31:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15916-RA | 959 | CG15916-RA | 84..896 | 17..829 | 4065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:31:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15890672..15891484 | 17..829 | 4065 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:31:50 has no hits.
BO13645.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:45:21 Download gff for
BO13645.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-RA | 1..816 | 17..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:59:18 Download gff for
BO13645.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-RA | 67..893 | 10..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:54:02 Download gff for
BO13645.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-RA | 89..896 | 22..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:45:21 Download gff for
BO13645.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-RA | 67..893 | 10..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:22:06 Download gff for
BO13645.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-RA | 89..896 | 22..831 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:22:06 Download gff for
BO13645.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15890677..15891484 | 22..831 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:54:02 Download gff for
BO13645.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15784710..15785517 | 22..831 | 99 | | Plus |
BO13645.pep Sequence
Translation from 16 to 847
> BO13645.pep
MLSIRVLRLQNGHSVLNNACQLALSRNKSSKRSSKDNVTRQGKIFGSLFG
NRLKGSKSHWYPSPDAGTSGNQKSLHALKFGTPHSKTTCSHNNRRMSVLN
KLFMTNITDILATGAVADSIVGHGVQISYVKITSDFSRINVYWMGKDGGE
NQELENTLNRMSGKLQHELSQLHLMGEVPKIKFVRDKTSTGLHQVHEVLS
KIDLQHSYSSSNAEVEESDAQSCQTAADEEWPEMRQDFLSFNHSLVMDKI
LGKMRKSKDAWVNHRQNIAKTASFLDH
BO13645.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:05:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15916-PA | 271 | CG15916-PA | 1..271 | 1..271 | 1407 | 100 | Plus |
