Clone BO13646 Report

Search the DGRC for BO13646

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:136
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptCG14591-RA
Protein status:BO13646.pep: validated full length
Sequenced Size:1030

Clone Sequence Records

BO13646.3prime Sequence

778 bp (737 high quality bases) assembled on 2006-05-08

> BO13646.3prime
ATGGTCTAGAAAGCTTGCGTCGATCTTGGTTGTTGGCATGGTGTACTCTG
CTGTAAGGGACGCCATTTCCCCTGCGTCATGCGGATGTCCATCGTCCACC
GCTTCCTGGTTGCTAAATCGGTGTCGCAATATCGCCTCCTCCTGCATGGC
ATAGTCACCTTGGGTTAATTGGTGATACTGGGCAGCCTCGCCCCTCGGCT
CCGGCATACTTCCCGATCCGGTCAGGCCGCTGCTGCTCCGATTCCGGCGT
CCGAACAGCACCACTGTGCCCTTACTCAGCAGCGGACAGAGCAGTGCTTG
GTGGCAGCACGCAAATATCCGGTAATTCGAGCCCTGGAACGGATCTGACA
TAGCCGCACAGAGCATGTGGTCCAGATTGATACCAGTAAAAATTGAGAGC
GGAGAGAGAAGGATGAAGTGATAAAACAGCATGAAGGCGGTACCTATATG
TGACCAGTGGAACTCGCTGAGGTCCTCGACAGTGTACGCTCCGCTTCGGA
TAATGTAAATCGGTATTATATAGAGCAGTGCATGCTGGATCCAATAGGTG
GCCTGCTCGAAGGGATATGTGCGGCCCTCCACCTCGGGGAAAAGAAACGC
CAGAAATGGGCCGTTGAGATTGCTCATCTGTATACGAAAGAGCGCTGTTG
TCGTCTTCGTCGGCTTGGCGGCCAAAAGATAAATCTGCAGGCATGACTGG
ACATGACATGGATTCAAGGCGAAAATCATTGACTGTCCGGAGAGTTTGAA
GCCCATCTCAATGCCAAAAATCATTGAC

BO13646.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:08:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG14591-PA 999 CG14591-RA 237..996 778..19 3800 100 Minus
CG14591-PB 999 CG14591-RB 237..996 778..19 3800 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:19:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG14591-RD 1640 CG14591-RD 405..1164 778..19 3800 100 Minus
CG14591-RC 1627 CG14591-RC 392..1151 778..19 3800 100 Minus
CG14591-RB 1771 CG14591-RB 536..1295 778..19 3800 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:19:16
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6037033..6037404 19..390 1860 100 Plus
2R 25286936 2R 6037817..6038013 491..687 985 100 Plus
2R 25286936 2R 6037661..6037762 391..492 510 100 Plus
2R 25286936 2R 6038071..6038164 685..778 470 100 Plus
Blast to na_te.dros performed on 2015-02-10 21:19:19 has no hits.

BO13646.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:09:10 Download gff for BO13646.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14591-PB 237..999 18..778 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:57:10 Download gff for BO13646.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14591-PB 237..999 18..778 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:20:37 Download gff for BO13646.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14591-RB 536..1295 19..778 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:37:26 Download gff for BO13646.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14591-RB 536..1295 19..778 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:37:26 Download gff for BO13646.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 6037818..6038010 492..684 100 <- Plus
2R 6038071..6038164 685..778 100   Plus
2R 6037033..6037404 19..390 100 <- Plus
2R 6037661..6037761 391..491 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:20:37 Download gff for BO13646.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 1924538..1924909 19..390 100 <- Plus
arm_2R 1925166..1925266 391..491 100 <- Plus
arm_2R 1925323..1925515 492..684 100 <- Plus
arm_2R 1925576..1925669 685..778 100   Plus

BO13646.5prime Sequence

786 bp (757 high quality bases) assembled on 2006-05-08

> BO13646.5prime
GAAGTTATCAGTCGACATGGGATGGGACTGGGCGGTCGGAGGTATATCCG
ATGAGATTCCGAGGACAACGGGACCAGAATGCATCAACTACATGACAGAT
CGACGTCGCTGGTTGGAGACGATACTACTGTCCGCCCTCTTCATCTTTAT
AATGCACCGCTCCTGGCAACGCCTAGCGCCGATTAAACTTCCGCCGCCGC
ACGAGATACAGAAGCCACACAGTCCTACAAGACTGTTTCTGCTAATAGCC
TTGTCAATGATTTTTGGCATTGAGATGGGCTTCAAACTCTCCGGACAGTC
AATGATTTTCGCCTTGAATCCATGTCATGTCCAGTCATGCCTGCAGATTT
ATCTTTTGGCCGCCAAGCCGACGAAGACGACAACAGCGCTCTTTCGTATA
CAGATGAGCAATCTCAACGGCCCATTTCTGGCGTTTCTTTTCCCCGAGGT
GGAGGGCCGCACATATCCCTTCGAGCAGGCCACCTATTGGATCCAGCATG
CACTGCTCTATATAATACCGATTTACATTATCCGAAGCGGAGCGTACACT
GTCGAGGACCTCAGCGAGTTCCACTGGTCACATATAGGTACCGCCTTCAT
GCTGTTTTATCACTTCATCCTTCTCTCTCCGCTCTCAATTTTTACTGGTA
TCAATCTGGACCACATGCTCTGTGCGGCTATGTCAGATCCGTTCCAGGGC
TCGAATTACCGGATATTTGCGTGCTGCCACCAAGCACTGCTCTGTCCGCT
GCTGAGTAAGGGCACAGTGGTGCTGTTCGGACGCCG

BO13646.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:08:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14591-PA 999 CG14591-RA 1..770 17..786 3850 100 Plus
CG14591-PB 999 CG14591-RB 1..770 17..786 3850 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:44:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG14591-RD 1640 CG14591-RD 169..938 17..786 3850 100 Plus
CG14591-RC 1627 CG14591-RC 156..925 17..786 3850 100 Plus
CG14591-RB 1771 CG14591-RB 300..1069 17..786 3850 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:44:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6038071..6038400 346..17 1650 100 Minus
2R 25286936 2R 6037817..6038013 540..344 985 100 Minus
2R 25286936 2R 6037259..6037404 786..641 730 100 Minus
2R 25286936 2R 6037661..6037762 640..539 510 100 Minus
Blast to na_te.dros performed on 2015-02-04 02:44:10 has no hits.

BO13646.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:09:11 Download gff for BO13646.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14591-PB 1..770 17..786 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:57:11 Download gff for BO13646.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14591-PB 1..770 17..786 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:47:35 Download gff for BO13646.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14591-RB 300..1069 17..786 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:24:08 Download gff for BO13646.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14591-RB 300..1069 17..786 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:24:08 Download gff for BO13646.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 6037259..6037404 641..786 100 <- Minus
2R 6037661..6037761 540..640 100 <- Minus
2R 6037818..6038010 347..539 100 <- Minus
2R 6038071..6038400 17..346 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:47:35 Download gff for BO13646.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 1925166..1925266 540..640 100 <- Minus
arm_2R 1924764..1924909 641..786 100 <- Minus
arm_2R 1925323..1925515 347..539 100 <- Minus
arm_2R 1925576..1925905 17..346 100   Minus

BO13646.complete Sequence

1030 bp assembled on 2006-10-11

GenBank Submission: FJ632884

> BO13646.complete
GAAGTTATCAGTCGACATGGGATGGGACTGGGCGGTCGGAGGTATATCCG
ATGAGATTCCGAGGACAACGGGACCAGAATGCATCAACTACATGACAGAT
CGACGTCGCTGGTTGGAGACGATACTACTGTCCGCCCTCTTCATCTTTAT
AATGCACCGCTCCTGGCAACGCCTAGCGCCGATTAAACTTCCGCCGCCGC
ACGAGATACAGAAGCCACACAGTCCTACAAGACTGTTTCTGCTAATAGCC
TTGTCAATGATTTTTGGCATTGAGATGGGCTTCAAACTCTCCGGACAGTC
AATGATTTTCGCCTTGAATCCATGTCATGTCCAGTCATGCCTGCAGATTT
ATCTTTTGGCCGCCAAGCCGACGAAGACGACAACAGCGCTCTTTCGTATA
CAGATGAGCAATCTCAACGGCCCATTTCTGGCGTTTCTTTTCCCCGAGGT
GGAGGGCCGCACATATCCCTTCGAGCAGGCCACCTATTGGATCCAGCATG
CACTGCTCTATATAATACCGATTTACATTATCCGAAGCGGAGCGTACACT
GTCGAGGACCTCAGCGAGTTCCACTGGTCACATATAGGTACCGCCTTCAT
GCTGTTTTATCACTTCATCCTTCTCTCTCCGCTCTCAATTTTTACTGGTA
TCAATCTGGACCACATGCTCTGTGCGGCTATGTCAGATCCGTTCCAGGGC
TCGAATTACCGGATATTTGCGTGCTGCCACCAAGCACTGCTCTGTCCGCT
GCTGAGTAAGGGCACAGTGGTGCTGTTCGGACGCCGGAATCGGAGCAGCA
GCGGCCTGACCGGATCGGGAAGTATGCCGGAGCCGAGGGGCGAGGCTGCC
CAGTATCACCAATTAACCCAAGGTGACTATGCCATGCAGGAGGAGGCGAT
ATTGCGACACCGATTTAGCAACCAGGAAGCGGTGGACGATGGACATCCGC
ATGACGCAGGGGAAATGGCGTCCCTTACAGCAGAGTACACCATGCCAACA
ACCAAGATCGACGCAAGCTTTCTAGACCAT

BO13646.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:32:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG14591-RD 999 CG14591-PD 1..996 17..1012 4980 100 Plus
CG14591-RC 999 CG14591-PC 1..996 17..1012 4980 100 Plus
CG14591-RB 999 CG14591-PB 1..996 17..1012 4980 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:32:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG14591-RD 1640 CG14591-RD 169..1164 17..1012 4980 100 Plus
CG14591-RC 1627 CG14591-RC 156..1151 17..1012 4980 100 Plus
CG14591-RB 1771 CG14591-RB 300..1295 17..1012 4980 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:32:09
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6037033..6037404 1012..641 1860 100 Minus
2R 25286936 2R 6038071..6038400 346..17 1650 100 Minus
2R 25286936 2R 6037817..6038013 540..344 985 100 Minus
2R 25286936 2R 6037661..6037762 640..539 510 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:32:10 has no hits.

BO13646.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:45:29 Download gff for BO13646.complete
Subject Subject Range Query Range Percent Splice Strand
CG14591-RB 1..999 17..1013 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:03:09 Download gff for BO13646.complete
Subject Subject Range Query Range Percent Splice Strand
CG14591-RB 301..1296 17..1012 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:26:29 Download gff for BO13646.complete
Subject Subject Range Query Range Percent Splice Strand
CG14591-RB 300..1295 17..1014 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:45:30 Download gff for BO13646.complete
Subject Subject Range Query Range Percent Splice Strand
CG14591-RB 301..1296 17..1012 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:33:34 Download gff for BO13646.complete
Subject Subject Range Query Range Percent Splice Strand
CG14591-RB 300..1295 17..1014 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:33:34 Download gff for BO13646.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6037818..6038010 347..539 100 <- Minus
2R 6037661..6037761 540..640 100 <- Minus
2R 6037031..6037404 641..1014 99 <- Minus
2R 6038071..6038400 17..346 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:26:29 Download gff for BO13646.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 1924536..1924909 641..1014 99 <- Minus
arm_2R 1925166..1925266 540..640 100 <- Minus
arm_2R 1925323..1925515 347..539 100 <- Minus
arm_2R 1925576..1925905 17..346 100   Minus

BO13646.pep Sequence

Translation from 16 to 1030

> BO13646.pep
MGWDWAVGGISDEIPRTTGPECINYMTDRRRWLETILLSALFIFIMHRSW
QRLAPIKLPPPHEIQKPHSPTRLFLLIALSMIFGIEMGFKLSGQSMIFAL
NPCHVQSCLQIYLLAAKPTKTTTALFRIQMSNLNGPFLAFLFPEVEGRTY
PFEQATYWIQHALLYIIPIYIIRSGAYTVEDLSEFHWSHIGTAFMLFYHF
ILLSPLSIFTGINLDHMLCAAMSDPFQGSNYRIFACCHQALLCPLLSKGT
VVLFGRRNRSSSGLTGSGSMPEPRGEAAQYHQLTQGDYAMQEEAILRHRF
SNQEAVDDGHPHDAGEMASLTAEYTMPTTKIDASFLDH

BO13646.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:05:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG14591-PD 332 CG14591-PD 1..332 1..332 1773 100 Plus
CG14591-PC 332 CG14591-PC 1..332 1..332 1773 100 Plus
CG14591-PB 332 CG14591-PB 1..332 1..332 1773 100 Plus
CG14591-PA 332 CG14591-PA 1..332 1..332 1773 100 Plus