Clone Sequence Records
BO13674.3prime Sequence
356 bp (355 high quality bases) assembled on 2006-05-08
> BO13674.3prime
ATGGTCTAGAAAGCTTGCCTTGGTCGCCGACTTCAGGTAGGCGATCAGAT
CGCCGCGCTCGTTGGGCTTCTTCAGACCGGCGAAGATCATCTTGGTGCCG
GGGATGTACTTCTTGGGGTTCTCCAGGTACTCGAACAGGGTGTCCTCGTT
CCAGGTGATGCCCTTGGCCTTGTTGGCGTCCGTGTACGCGAATCCGGCCG
CCTGTCCGGTCTTGCGACCGATCAGACCATGCAGATTGGGTCCAACCTTG
TGCTTGCCACCAGCCTCAACGGTGTGGCACTGGGCGCAGCGCTGCACGAA
CAGCTTCTTTCCCTTCTCAACATCACCAGCAGGAACGCCCATGTCGACTG
ATAACT
BO13674.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:09:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17903-PA | 327 | Cyt-c-p-RA | 1..324 | 342..19 | 1620 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:30:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-p-RB | 634 | CG17903-RB | 40..363 | 342..19 | 1620 | 100 | Minus |
Cyt-c-p-RA | 681 | CG17903-RA | 87..410 | 342..19 | 1620 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:30:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16722050..16722373 | 342..19 | 1620 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 15:30:33 has no hits.
BO13674.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:09:55 Download gff for
BO13674.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17903-PA | 1..327 | 15..342 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:58:14 Download gff for
BO13674.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17903-PA | 1..327 | 15..342 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 15:43:02 Download gff for
BO13674.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-p-RA | 83..413 | 15..350 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:02:02 Download gff for
BO13674.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-p-RA | 83..413 | 15..350 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:02:02 Download gff for
BO13674.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16722046..16722376 | 15..350 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 15:43:02 Download gff for
BO13674.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16722046..16722376 | 15..350 | 98 | | Minus |
BO13674.5prime Sequence
356 bp (355 high quality bases) assembled on 2006-05-08
> BO13674.5prime
GAAGTTATCAGTCGACATGGGCGTTCCTGCTGGTGATGTTGAGAAGGGAA
AGAAGCTGTTCGTGCAGCGCTGCGCCCAGTGCCACACCGTTGAGGCTGGT
GGCAAGCACAAGGTTGGACCCAATCTGCATGGTCTGATCGGTCGCAAGAC
CGGACAGGCGGCCGGATTCGCGTACACGGACGCCAACAAGGCCAAGGGCA
TCACCTGGAACGAGGACACCCTGTTCGAGTACCTGGAGAACCCCAAGAAG
TACATCCCCGGCACCAAGATGATCTTCGCCGGTCTGAAGAAGCCCAACGA
GCGCGGCGATCTGATCGCCTACCTGAAGTCGGCGACCAAGGCAAGCTTTC
TAGACC
BO13674.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:09:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17903-PA | 327 | Cyt-c-p-RA | 1..324 | 17..340 | 1620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:49:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-p-RB | 634 | CG17903-RB | 40..363 | 17..340 | 1620 | 100 | Plus |
Cyt-c-p-RA | 681 | CG17903-RA | 87..410 | 17..340 | 1620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 09:49:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16722050..16722373 | 17..340 | 1620 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 09:49:18 has no hits.
BO13674.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:09:56 Download gff for
BO13674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17903-PA | 1..327 | 17..344 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:58:15 Download gff for
BO13674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17903-PA | 1..327 | 17..344 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:55:14 Download gff for
BO13674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-p-RA | 83..413 | 9..344 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:18:02 Download gff for
BO13674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-p-RA | 83..413 | 9..344 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:18:02 Download gff for
BO13674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16722046..16722376 | 9..344 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:55:14 Download gff for
BO13674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16722046..16722376 | 9..344 | 98 | | Plus |
BO13674.complete Sequence
358 bp assembled on 2007-10-17
GenBank Submission: FJ632899
> BO13674.complete
GAAGTTATCAGTCGACATGGGCGTTCCTGCTGGTGATGTTGAGAAGGGAA
AGAAGCTGTTCGTGCAGCGCTGCGCCCAGTGCCACACCGTTGAGGCTGGT
GGCAAGCACAAGGTTGGACCCAATCTGCATGGTCTGATCGGTCGCAAGAC
CGGACAGGCGGCCGGATTCGCGTACACGGACGCCAACAAGGCCAAGGGCA
TCACCTGGAACGAGGACACCCTGTTCGAGTACCTGGAGAACCCCAAGAAG
TACATCCCCGGCACCAAGATGATCTTCGCCGGTCTGAAGAAGCCCAACGA
GCGCGGCGATCTGATCGCCTACCTGAAGTCGGCGACCAAGGCAAGCTTTC
TAGACCAT
BO13674.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 21:03:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-p-RB | 327 | CG17903-PB | 1..324 | 17..340 | 1620 | 100 | Plus |
Cyt-c-p-RA | 327 | CG17903-PA | 1..324 | 17..340 | 1620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:03:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-p-RB | 634 | CG17903-RB | 40..363 | 17..340 | 1620 | 100 | Plus |
Cyt-c-p-RA | 681 | CG17903-RA | 87..410 | 17..340 | 1620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:03:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16722050..16722373 | 17..340 | 1620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:03:23 has no hits.
BO13674.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:02:10 Download gff for
BO13674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-p-RA | 1..327 | 17..344 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:15:17 Download gff for
BO13674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-p-RA | 141..471 | 9..344 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:15:47 Download gff for
BO13674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-p-RA | 87..410 | 17..342 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:38:23 Download gff for
BO13674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-p-RA | 145..468 | 17..342 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:47 Download gff for
BO13674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-p-RA | 87..410 | 17..342 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:47 Download gff for
BO13674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16722050..16722373 | 17..342 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:15:47 Download gff for
BO13674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16722050..16722373 | 17..342 | 99 | | Plus |
BO13674.pep Sequence
Translation from 16 to 358
> BO13674.pep
MGVPAGDVEKGKKLFVQRCAQCHTVEAGGKHKVGPNLHGLIGRKTGQAAG
FAYTDANKAKGITWNEDTLFEYLENPKKYIPGTKMIFAGLKKPNERGDLI
AYLKSATKASFLDH
BO13674.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:40:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-p-PB | 108 | CG17903-PB | 1..108 | 1..108 | 578 | 100 | Plus |
Cyt-c-p-PA | 108 | CG17903-PA | 1..108 | 1..108 | 578 | 100 | Plus |
Cyt-c-d-PB | 105 | CG13263-PB | 3..103 | 5..105 | 407 | 72.3 | Plus |
Cyt-c-d-PA | 105 | CG13263-PA | 3..103 | 5..105 | 407 | 72.3 | Plus |