Clone Sequence Records
BO13676.3prime Sequence
865 bp (755 high quality bases) assembled on 2006-05-08
> BO13676.3prime
ATGGTCTAGAAAGCTTGCGGCCCACACCCGTATGGTGTAGTCCCAACTGC
CGGTGGATAGAGCGGTGCCATCGGGCGAGACCTGGACGCAGGACACCTTG
TTCTCGTGCCCGTACAGCAGGCAGACCCTTTCCGATTTCAGCGTGTCCCA
CAAGTTGACGGTGTAATCGTTGTAGCCAGCAAACAGTAATCTTCCACTGA
CCGAAAAGTCCACCGAATTGACGCCAAAGATGATGCTCTCCTTGGCGAAC
ACGGCCACCTCGCGATCCGCTCGCATATCGTACAGCCGGCAGCTGCTGTC
ATCCGATCCAGTGGCTATGGCATCTCCGCAAGGATGGAACTTAACGCTAT
TCACATCCGATTGATGACCCTCGAAGGACTGAACGACATGACCAGAGCGC
ATGTCCCAGATGAAGGCCATGCGATCGCAACTGCCCGAGACAAAGGTGTT
GCCCGTTTCGTTGGGAGCCAAATCGATGGCCATTACATCGCCGGAATGTC
CGTGGAAGCTTTGCAGTAGCTGGCCCGATTCCACGTCCCACAAAGCGCAT
GTGGAATCGCCACTGCCCGTGAGGATTTGCTGATCGGAATTCGGATAGAT
GCAGCACGACATGTAGCTGGTGTGGGTGCCCACTGTGCGCTTCTTGGCGG
CCATCTCCTCATCGGAGGTTATCGGATACACGGTGACCTTATTGTCTAGT
CCGCCGCAGGCCACAAAATTGCCCGACGGCGCGTAGGCACAGGCCATAAT
CCAGGTGGTGGGCATGGTGACGGCGTGCTCCTTGTTCGTGGTGAACGCAT
CCCAGATGATCAGACGTCCGTCCTGCGACGAGGAGATGATGTGACGCTTG
TCGGGACTCCGGTCG
BO13676.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:09:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10763-PA | 1077 | Gbeta5-RA | 233..1074 | 860..19 | 4210 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 12:08:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbeta5-RA | 1545 | CG10763-RA | 360..1206 | 865..19 | 4220 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 12:08:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8151070..8151916 | 19..865 | 4220 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-06 12:08:54 has no hits.
BO13676.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:09:59 Download gff for
BO13676.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10763-PA | 228..1077 | 15..865 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:58:20 Download gff for
BO13676.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10763-PA | 228..1077 | 15..865 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:57:49 Download gff for
BO13676.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 360..1211 | 13..865 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:38:52 Download gff for
BO13676.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 360..1211 | 13..865 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:38:52 Download gff for
BO13676.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8151065..8151916 | 13..865 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:57:49 Download gff for
BO13676.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8045098..8045949 | 13..865 | 99 | | Plus |
BO13676.5prime Sequence
893 bp (829 high quality bases) assembled on 2006-05-08
> BO13676.5prime
GAAGTTATCAGTCGACATGTCGGAGGCGGCGGTGCCAGCGAGCAATGCGA
ACGCGAATGCCACTGAAAAGATGGCCAGTTTGGTGCGAGAGGCGGAGAAT
TTGAAGACCAAACTGGAGGAGGAGCGCCAGAAGCTGAACGACGTCAATCT
GTCGAACATCGCAGAGCGGCTGGAGCAGATCGCCTATGTGAACATCAAGC
CGCGTAAGGTGCTCAAGGGCCACCAGGCGAAGGTCCTGTGCACCGACTGG
AGTCCCGACAAGCGTCACATCATCTCCTCGTCGCAGGACGGACGTCTGAT
CATCTGGGATGCGTTCACCACGAACAAGGAGCACGCCGTCACCATGCCCA
CCACCTGGATTATGGCCTGTGCCTACGCGCCGTCGGGCAATTTTGTGGCC
TGCGGCGGACTAGACAATAAGGTCACCGTGTATCCGATAACCTCCGATGA
GGAGATGGCCGCCAAGAAGCGCACAGTGGGCACCCACACCAGCTACATGT
CGTGCTGCATCTATCCGAATTCCGATCAGCAAATCCTCACGGGCAGTGGC
GATTCCACATGCGCTTTGTGGGACGTGGAATCGGGCCAGCTACTGCAAAG
CTTCCACGGACATTCCGGCGATGTAATGGCCATCGATTTGGCTCCCAACG
AAACGGGCAACACCTTTGTCTCGGGCAGTTGCGATCGCATGGCCTTCATC
TGGGACATGCGCTCTGGTCATGTCGTTCAGTCCTTCGAGGGTCATCAATC
GGATGTGAATAGCGTTAAGTTCCATCCTTGCGGAGATGCCATAGCCACTG
GATCGGATGACAGCAGCTGCCGGCTGTACGATATGCGAGCGGATCGCGAG
GTGGCCGTGTTCGCCAAGGAGAGCATCATCTTTGGCGTCAATT
BO13676.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:09:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10763-PA | 1077 | Gbeta5-RA | 1..877 | 17..893 | 4385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:44:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbeta5-RA | 1545 | CG10763-RA | 132..1009 | 16..893 | 4390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:43:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8151267..8152144 | 893..16 | 4390 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 02:43:56 has no hits.
BO13676.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:09:59 Download gff for
BO13676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10763-PA | 1..877 | 17..893 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:58:21 Download gff for
BO13676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10763-PA | 1..877 | 17..893 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:47:33 Download gff for
BO13676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 126..1009 | 10..893 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:24:06 Download gff for
BO13676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 126..1009 | 10..893 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:24:06 Download gff for
BO13676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8151267..8152150 | 10..893 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:47:33 Download gff for
BO13676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8045300..8046183 | 10..893 | 99 | | Minus |
BO13676.complete Sequence
1108 bp assembled on 2006-10-11
GenBank Submission: FJ632901
> BO13676.complete
GAAGTTATCAGTCGACATGTCGGAGGCGGCGGTGCCAGCGAGCAATGCGA
ACGCGAATGCCACTGAAAAGATGGCCAGTTTGGTGCGAGAGGCGGAGAAT
TTGAAGACCAAACTGGAGGAGGAGCGCCAGAAGCTGAACGACGTCAATCT
GTCGAACATCGCAGAGCGGCTGGAGCAGATCGCCTATGTGAACATCAAGC
CGCGTAAGGTGCTCAAGGGCCACCAGGCGAAGGTCCTGTGCACCGACTGG
AGTCCCGACAAGCGTCACATCATCTCCTCGTCGCAGGACGGACGTCTGAT
CATCTGGGATGCGTTCACCACGAACAAGGAGCACGCCGTCACCATGCCCA
CCACCTGGATTATGGCCTGTGCCTACGCGCCGTCGGGCAATTTTGTGGCC
TGCGGCGGACTAGACAATAAGGTCACCGTGTATCCGATAACCTCCGATGA
GGAGATGGCCGCCAAGAAGCGCACAGTGGGCACCCACACCAGCTACATGT
CGTGCTGCATCTATCCGAATTCCGATCAGCAAATCCTCACGGGCAGTGGC
GATTCCACATGCGCTTTGTGGGACGTGGAATCGGGCCAGCTACTGCAAAG
CTTCCACGGACATTCCGGCGATGTAATGGCCATCGATTTGGCTCCCAACG
AAACGGGCAACACCTTTGTCTCGGGCAGTTGCGATCGCATGGCCTTCATC
TGGGACATGCGCTCTGGTCATGTCGTTCAGTCCTTCGAGGGTCATCAATC
GGATGTGAATAGCGTTAAGTTCCATCCTTGCGGAGATGCCATAGCCACTG
GATCGGATGACAGCAGCTGCCGGCTGTACGATATGCGAGCGGATCGCGAG
GTGGCCGTGTTCGCCAAGGAGAGCATCATCTTTGGCGTCAATTCGGTGGA
CTTTTCGGTCAGTGGAAGATTACTGTTTGCTGGCTACAACGATTACACCG
TCAACTTGTGGGACACGCTGAAATCGGAAAGGGTCTGCCTGCTGTACGGG
CACGAGAACAAGGTGTCCTGCGTCCAGGTCTCGCCCGATGGCACCGCTCT
ATCCACCGGCAGTTGGGACTACACCATACGGGTGTGGGCCGCAAGCTTTC
TAGACCAT
BO13676.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:25:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbeta5-RA | 1077 | CG10763-PA | 1..1074 | 17..1090 | 5370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:25:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbeta5-RA | 1545 | CG10763-RA | 132..1206 | 16..1090 | 5375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:25:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8151070..8152144 | 1090..16 | 5375 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:25:17 has no hits.
BO13676.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:45:22 Download gff for
BO13676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 1..1077 | 17..1094 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:59:20 Download gff for
BO13676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 129..1214 | 10..1096 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:53:35 Download gff for
BO13676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 133..1206 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:45:22 Download gff for
BO13676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 129..1214 | 10..1096 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:18:04 Download gff for
BO13676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 133..1206 | 17..1092 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:18:04 Download gff for
BO13676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8151068..8152143 | 17..1092 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:53:35 Download gff for
BO13676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8045101..8046176 | 17..1092 | 99 | | Minus |
BO13676.pep Sequence
Translation from 16 to 1108
> BO13676.pep
MSEAAVPASNANANATEKMASLVREAENLKTKLEEERQKLNDVNLSNIAE
RLEQIAYVNIKPRKVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAF
TTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAK
KRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHS
GDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSV
KFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSG
RLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGTALSTGSW
DYTIRVWAASFLDH
BO13676.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:05:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbeta5-PA | 358 | CG10763-PA | 1..358 | 1..358 | 1894 | 100 | Plus |
| Gbeta13F-PH | 340 | CG10545-PH | 3..339 | 18..357 | 932 | 49.4 | Plus |
| Gbeta13F-PG | 340 | CG10545-PG | 3..339 | 18..357 | 932 | 49.4 | Plus |
| Gbeta13F-PF | 340 | CG10545-PF | 3..339 | 18..357 | 932 | 49.4 | Plus |
| Gbeta13F-PE | 340 | CG10545-PE | 3..339 | 18..357 | 932 | 49.4 | Plus |
