Clone Sequence Records
BO13683.3prime Sequence
515 bp (514 high quality bases) assembled on 2006-05-08
> BO13683.3prime
ATGGTCTAGAAAGCTTGCAACATATCTGCTGGCGATGGCCAGAACCTTGG
TGTAATCGGCTCCTTTGGCCAGCGTCTTCTCCTTGAGGATGGTTCGCAGG
ATCGTGGGAATGGGCACATGGATGCGAGTGCCCAGCGGACTGCCATTGTC
GTCGATGAGCACCAGGTTGTTGCTATCGAATTTTGGCTGTTTGGGCTTCT
GGTTCTGCTTGAGTCCCACGAGAATGCCCTTCTTCATCTGTCCCTTGATG
GCCACCAGCACCTTATCGCCAATGAAGCCGACTCCGCGTTTGTTGTAGAC
ATGGATGCACCTCGGTGGTCGCCCCTCGGCCATCGCTTTCTTTCCCAAAT
CGCTGTTGTCCACCACCCGTAACCGGGCCAATTTCCGGATTTCGCAGCAC
GCCGGCGTTGTGTGAATCAATTGCTGTGTTTGCTGGCCGCCCAGGGTTAC
CGCCAGTGGTTGGGCCACTTGTCTAACTGTTTTCAGGATGCGCAGCGCCA
TGTCGACTGATAACT
BO13683.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:09:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14048-PA | 486 | mRpL14-RA | 1..483 | 501..19 | 2390 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:52:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL14-RB | 597 | CG14048-RB | 59..541 | 501..19 | 2400 | 99.8 | Minus |
| mRpL14-RA | 653 | CG14048-RA | 115..597 | 501..19 | 2400 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:52:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2344053..2344535 | 19..501 | 2400 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-10 15:52:43 has no hits.
BO13683.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:10:07 Download gff for
BO13683.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14048-PA | 1..486 | 18..501 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:58:34 Download gff for
BO13683.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14048-PA | 1..486 | 18..501 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 23:17:14 Download gff for
BO13683.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 115..597 | 19..501 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:47 Download gff for
BO13683.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 115..597 | 19..501 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:47 Download gff for
BO13683.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2344053..2344535 | 19..501 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 23:17:14 Download gff for
BO13683.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2238086..2238568 | 19..501 | 99 | | Plus |
BO13683.5prime Sequence
515 bp (514 high quality bases) assembled on 2006-05-08
> BO13683.5prime
GAAGTTATCAGTCGACATGGCGCTGCGCATCCTGAAAACAGTTAGACAAG
TGGCCCAACCACTGGCGGTAACCCTGGGCGGCCAGCAAACACAGCAATTG
ATTCACACAACGCCGGCGTGCTGCGAAATCCGGAAATTGGCCCGGTTACG
GGTGGTGGACAACAGCGATTTGGGAAAGAAAGCGATGGCCGAGGGGCGAC
CACCGAGGTGCATCCATGTCTACAACAAACGCGGAGTCGGCTTCATTGGC
GATAAGGTGCTGGTGGCCATCAAGGGACAGATGAAGAAGGGCATTCTCGT
GGGACTCAAGCAGAACCAGAAGCCCAAACAGCCAAAATTCGATAGCAACA
ACCTGGTGCTCATCGACGACAATGGCAGTCCGCTGGGCACTCGCATCCAT
GTGCCCATTCCCACGATCCTGCGAACCATCCTCAAGGAGAAGACGCTGGC
CAAAGGAGCCGATTACACCAAGGTTCTGGCCATCGCCAGCAGATATGTTG
CAAGCTTTCTAGACC
BO13683.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:09:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14048-PA | 486 | mRpL14-RA | 1..483 | 17..499 | 2390 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:03:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL14-RB | 597 | CG14048-RB | 59..541 | 17..499 | 2400 | 99.8 | Plus |
| mRpL14-RA | 653 | CG14048-RA | 115..597 | 17..499 | 2400 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:03:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2344053..2344535 | 499..17 | 2400 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:03:43 has no hits.
BO13683.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:10:08 Download gff for
BO13683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14048-PA | 1..486 | 17..500 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:58:35 Download gff for
BO13683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14048-PA | 1..486 | 17..500 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:14:35 Download gff for
BO13683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 115..597 | 17..499 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:55:11 Download gff for
BO13683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 115..597 | 17..499 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:55:11 Download gff for
BO13683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2344053..2344535 | 17..499 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:14:35 Download gff for
BO13683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2238086..2238568 | 17..499 | 99 | | Minus |
BO13683.complete Sequence
517 bp assembled on 2006-10-11
GenBank Submission: FJ632904
> BO13683.complete
GAAGTTATCAGTCGACATGGCGCTGCGCATCCTGAAAACAGTTAGACAAG
TGGCCCAACCACTGGCGGTAACCCTGGGCGGCCAGCAAACACAGCAATTG
ATTCACACAACGCCGGCGTGCTGCGAAATCCGGAAATTGGCCCGGTTACG
GGTGGTGGACAACAGCGATTTGGGAAAGAAAGCGATGGCCGAGGGGCGAC
CACCGAGGTGCATCCATGTCTACAACAAACGCGGAGTCGGCTTCATTGGC
GATAAGGTGCTGGTGGCCATCAAGGGACAGATGAAGAAGGGCATTCTCGT
GGGACTCAAGCAGAACCAGAAGCCCAAACAGCCAAAATTCGATAGCAACA
ACCTGGTGCTCATCGACGACAATGGCAGTCCGCTGGGCACTCGCATCCAT
GTGCCCATTCCCACGATCCTGCGAACCATCCTCAAGGAGAAGACGCTGGC
CAAAGGAGCCGATTACACCAAGGTTCTGGCCATCGCCAGCAGATATGTTG
CAAGCTTTCTAGACCAT
BO13683.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:18:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL14-RB | 486 | CG14048-PB | 1..483 | 17..499 | 2400 | 99.8 | Plus |
| mRpL14-RA | 486 | CG14048-PA | 1..483 | 17..499 | 2400 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:18:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL14-RB | 597 | CG14048-RB | 59..541 | 17..499 | 2400 | 99.8 | Plus |
| mRpL14-RA | 653 | CG14048-RA | 115..597 | 17..499 | 2400 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:18:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2344053..2344535 | 499..17 | 2400 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:18:05 has no hits.
BO13683.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:45:27 Download gff for
BO13683.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 1..486 | 17..500 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:59:25 Download gff for
BO13683.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 103..585 | 17..499 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:51 Download gff for
BO13683.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 115..597 | 17..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:45:27 Download gff for
BO13683.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 103..585 | 17..499 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:15:25 Download gff for
BO13683.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 115..597 | 17..501 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:15:25 Download gff for
BO13683.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2344051..2344535 | 17..501 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:51 Download gff for
BO13683.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2238084..2238568 | 17..501 | 99 | | Minus |
BO13683.pep Sequence
Translation from 16 to 517
> BO13683.pep
MALRILKTVRQVAQPLAVTLGGQQTQQLIHTTPACCEIRKLARLRVVDNS
DLGKKAMAEGRPPRCIHVYNKRGVGFIGDKVLVAIKGQMKKGILVGLKQN
QKPKQPKFDSNNLVLIDDNGSPLGTRIHVPIPTILRTILKEKTLAKGADY
TKVLAIASRYVASFLDH
BO13683.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:05:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL14-PB | 161 | CG14048-PB | 1..161 | 1..161 | 817 | 100 | Plus |
| mRpL14-PA | 161 | CG14048-PA | 1..161 | 1..161 | 817 | 100 | Plus |
