Clone BO13691 Report

Search the DGRC for BO13691

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:136
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG16743-RA
Protein status:BO13691.pep: validated full length
Sequenced Size:610

Clone Sequence Records

BO13691.3prime Sequence

608 bp (607 high quality bases) assembled on 2006-05-08

> BO13691.3prime
ATGGTCTAGAAAGCTTGCCGTTGAAGATTGGTGGTGACCGTCCTCGTTGT
ATTCCTTGTTGACCTTAAGGGAATGATTAATAACGCTCGAGCCGCCTGGA
GGATAGTTCGGGGCAGGCCCTGATCCCGGGCCGCTGGCAGGCTGCTGTGC
CTGAGGCTGATTGGGGATCGCATTTGGGTTGTTAACTGGATTCTGTCCGG
GAGCCCCCTGCGGTGGATAGCCGCCTGGATATCCGGACGGGTCGGGTGGA
TACATTGATGGTGGCGGAGCTTGTTGCGGGTGTGGCGGTGGTGGTGGTGG
TGGGGGCATGTACAGATTGTAGGGATATGAAGGATAGCCTCCCATTTGAG
GATACGGAGGATACGGCATGTACGGATTGTAGAGATATGAAGGATAGCCT
CCCATTTCTTGATACGGAGGATAGCCCGGATTAGGATATGCAGGATAATT
GTACTTGTGCTCCGTCTTGGAGTGCTTGTGCTTCTTCTCTCCACTGCTGC
TGCTGCTGCTGTCGCTGCTATCGCTGTCCGTCCTAACCACTTCGTACTGA
AGTAGCAGTACCAGAAGGACTCCAATCGCCGCACAGCTCTTCATGTCGAC
TGATAACT

BO13691.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:09:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG16743-PA 579 CG16743-RA 1..576 594..19 2880 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:37:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG16743-RB 1013 CG16743-RB 257..832 594..19 2880 100 Minus
CG16743-RA 742 CG16743-RA 55..630 594..19 2880 100 Minus
CG16743-RB 1013 CG16743-RB 428..486 363..305 220 91.5 Minus
CG16743-RB 1013 CG16743-RB 488..546 423..365 220 91.5 Minus
CG16743-RA 742 CG16743-RA 226..284 363..305 220 91.5 Minus
CG16743-RA 742 CG16743-RA 286..344 423..365 220 91.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:36:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10972652..10973227 594..19 2880 100 Minus
2L 23513712 2L 10972823..10972881 363..305 220 91.5 Minus
2L 23513712 2L 10972883..10972941 423..365 220 91.5 Minus
Blast to na_te.dros performed on 2015-02-08 12:37:01 has no hits.

BO13691.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:10:21 Download gff for BO13691.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16743-PA 1..579 18..594 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:58:54 Download gff for BO13691.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16743-PA 1..579 18..594 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:39:02 Download gff for BO13691.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16743-RA 52..630 19..597 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 15:22:45 Download gff for BO13691.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16743-RA 52..630 19..597 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 15:22:45 Download gff for BO13691.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 10972649..10973226 20..597 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:39:02 Download gff for BO13691.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10972649..10973226 20..597 99 -> Minus

BO13691.5prime Sequence

608 bp (607 high quality bases) assembled on 2006-05-08

> BO13691.5prime
GAAGTTATCAGTCGACATGAAGAGCTGTGCGGCGATTGGAGTCCTTCTGG
TACTGCTACTTCAGTACGAAGTGGTTAGGACGGACAGCGATAGCAGCGAC
AGCAGCAGCAGCAGCAGTGGAGAGAAGAAGCACAAGCACTCCAAGACGGA
GCACAAGTACAATTATCCTGCATATCCTAATCCGGGCTATCCTCCGTATC
AAGAAATGGGAGGCTATCCTTCATATCTCTACAATCCGTACATGCCGTAT
CCTCCGTATCCTCAAATGGGAGGCTATCCTTCATATCCCTACAATCTGTA
CATGCCCCCACCACCACCACCACCGCCACACCCGCAACAAGCTCCGCCAC
CATCAATGTATCCACCCGACCCGTCCGGATATCCAGGCGGCTATCCACCG
CAGGGGGCTCCCGGACAGAATCCAGTTAACAACCCAAATGCGATCCCCAA
TCAGCCTCAGGCACAGCAGCCTGCCAGCGGCCCGGGATCAGGGCCTGCCC
CGAACTATCCTCCAGGCGGCTCGAGCGTTATTAATCATTCCCTTAAGGTC
AACAAGGAATACAACGAGGACGGTCACCACCAATCTTCAACGGCAAGCTT
TCTAGACC

BO13691.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:09:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG16743-PA 579 CG16743-RA 1..576 17..592 2880 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:07:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG16743-RB 1013 CG16743-RB 257..832 17..592 2880 100 Plus
CG16743-RA 742 CG16743-RA 55..630 17..592 2880 100 Plus
CG16743-RB 1013 CG16743-RB 428..486 248..306 220 91.5 Plus
CG16743-RB 1013 CG16743-RB 488..546 188..246 220 91.5 Plus
CG16743-RA 742 CG16743-RA 226..284 248..306 220 91.5 Plus
CG16743-RA 742 CG16743-RA 286..344 188..246 220 91.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:07:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10972652..10973227 17..592 2880 100 Plus
2L 23513712 2L 10972823..10972881 248..306 220 91.5 Plus
2L 23513712 2L 10972883..10972941 188..246 220 91.5 Plus
Blast to na_te.dros performed on 2015-02-11 23:07:23 has no hits.

BO13691.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:10:23 Download gff for BO13691.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16743-PA 1..579 17..593 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:58:56 Download gff for BO13691.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16743-PA 1..579 17..593 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:40:41 Download gff for BO13691.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16743-RA 52..630 14..592 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:54:03 Download gff for BO13691.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16743-RA 52..630 14..592 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:54:03 Download gff for BO13691.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10972649..10973226 14..591 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:40:41 Download gff for BO13691.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10972649..10973226 14..591 99 -> Plus

BO13691.complete Sequence

610 bp assembled on 2006-10-11

GenBank Submission: FJ632910

> BO13691.complete
GAAGTTATCAGTCGACATGAAGAGCTGTGCGGCGATTGGAGTCCTTCTGG
TACTGCTACTTCAGTACGAAGTGGTTAGGACGGACAGCGATAGCAGCGAC
AGCAGCAGCAGCAGCAGTGGAGAGAAGAAGCACAAGCACTCCAAGACGGA
GCACAAGTACAATTATCCTGCATATCCTAATCCGGGCTATCCTCCGTATC
AAGAAATGGGAGGCTATCCTTCATATCTCTACAATCCGTACATGCCGTAT
CCTCCGTATCCTCAAATGGGAGGCTATCCTTCATATCCCTACAATCTGTA
CATGCCCCCACCACCACCACCACCGCCACACCCGCAACAAGCTCCGCCAC
CATCAATGTATCCACCCGACCCGTCCGGATATCCAGGCGGCTATCCACCG
CAGGGGGCTCCCGGACAGAATCCAGTTAACAACCCAAATGCGATCCCCAA
TCAGCCTCAGGCACAGCAGCCTGCCAGCGGCCCGGGATCAGGGCCTGCCC
CGAACTATCCTCCAGGCGGCTCGAGCGTTATTAATCATTCCCTTAAGGTC
AACAAGGAATACAACGAGGACGGTCACCACCAATCTTCAACGGCAAGCTT
TCTAGACCAT

BO13691.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:04:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG16743-RB 723 CG16743-PB 145..720 17..592 2880 100 Plus
CG16743-RA 579 CG16743-PA 1..576 17..592 2880 100 Plus
CG16743-RB 723 CG16743-PB 316..374 248..306 220 91.5 Plus
CG16743-RB 723 CG16743-PB 376..434 188..246 220 91.5 Plus
CG16743-RA 579 CG16743-PA 172..230 248..306 220 91.5 Plus
CG16743-RA 579 CG16743-PA 232..290 188..246 220 91.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:04:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG16743-RB 1013 CG16743-RB 257..832 17..592 2880 100 Plus
CG16743-RA 742 CG16743-RA 55..630 17..592 2880 100 Plus
CG16743-RB 1013 CG16743-RB 428..486 248..306 220 91.5 Plus
CG16743-RB 1013 CG16743-RB 488..546 188..246 220 91.5 Plus
CG16743-RA 742 CG16743-RA 226..284 248..306 220 91.5 Plus
CG16743-RA 742 CG16743-RA 286..344 188..246 220 91.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:04:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10972652..10973227 17..592 2880 100 Plus
2L 23513712 2L 10972823..10972881 248..306 220 91.5 Plus
2L 23513712 2L 10972883..10972941 188..246 220 91.5 Plus
Blast to na_te.dros performed on 2014-11-27 13:04:43 has no hits.

BO13691.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:53:11 Download gff for BO13691.complete
Subject Subject Range Query Range Percent Splice Strand
CG16743-RA 1..579 17..593 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:25:19 Download gff for BO13691.complete
Subject Subject Range Query Range Percent Splice Strand
CG16743-RA 70..648 14..592 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:26:37 Download gff for BO13691.complete
Subject Subject Range Query Range Percent Splice Strand
CG16743-RA 55..630 17..594 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:53:11 Download gff for BO13691.complete
Subject Subject Range Query Range Percent Splice Strand
CG16743-RA 70..648 14..592 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:10:30 Download gff for BO13691.complete
Subject Subject Range Query Range Percent Splice Strand
CG16743-RA 55..630 17..594 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:10:30 Download gff for BO13691.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10972652..10973227 17..594 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:26:37 Download gff for BO13691.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10972652..10973227 17..594 99   Plus

BO13691.pep Sequence

Translation from 16 to 610

> BO13691.pep
MKSCAAIGVLLVLLLQYEVVRTDSDSSDSSSSSSGEKKHKHSKTEHKYNY
PAYPNPGYPPYQEMGGYPSYLYNPYMPYPPYPQMGGYPSYPYNLYMPPPP
PPPPHPQQAPPPSMYPPDPSGYPGGYPPQGAPGQNPVNNPNAIPNQPQAQ
QPASGPGSGPAPNYPPGGSSVINHSLKVNKEYNEDGHHQSSTASFLDH

BO13691.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG16743-PA 192 CG16743-PA 1..192 1..192 1098 100 Plus
CG16743-PB 240 CG16743-PB 49..240 1..192 1098 100 Plus
CG15021-PA 420 CG15021-PA 144..309 48..168 171 32.9 Plus
CG10555-PB 926 CG10555-PB 455..604 39..166 165 31.1 Plus
CG10555-PA 926 CG10555-PA 455..604 39..166 165 31.1 Plus
CG15021-PA 420 CG15021-PA 140..285 54..171 164 36.2 Plus
CG15021-PA 420 CG15021-PA 86..193 51..166 155 37.9 Plus