Clone BO13731 Report

Search the DGRC for BO13731

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:137
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptObp44a-RA
Protein status:BO13731.pep: Imported from assembly
Sequenced Size:463

Clone Sequence Records

BO13731.complete Sequence

463 bp assembled on 2010-02-09

GenBank Submission: FJ632919

> BO13731.complete
GAAGTTATCAGTCGACATGAAGAACGCTGTTGCTATTCTGCTGTGCGCCC
TGCTGGGTCTGGCCTCTGCCTCCGACTACAAGCTGCGCACCGCCGAGGAT
CTGCAGAGCGCGCGCAAGGAGTGTGCCGCCAGCAGCAAGGTGACCGAGGC
CCTGATCGCCAAGTACAAGACCTTCGACTATCCCGACGATGACATCACCC
GCAACTACATCCAGTGCATCTTCGTCAAATTCGACCTGTTCGATGAGGCC
AAGGGCTTCAAGGTGGAGAACCTGGTGGCGCAACTGGGCCAGGGCAAGGA
GGACAAGGCCGCGCTGAAGGCCGACATCGAGAAGTGCGCCGACAAGAACG
AGCAGAAGTCGCCCGCCAACGAATGGGCCTTCCGTGGCTTCAAGTGTTTC
CTTGGCAAGAACCTGCCCCTCGTGCAGGCCGCCGTCCAGAAGAACGCAAG
CTTTCTAGACCAT

BO13731.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:20:47
Subject Length Description Subject Range Query Range Score Percent Strand
Obp44a-RB 432 CG2297-PB 1..429 17..445 2145 100 Plus
Obp44a-RA 432 CG2297-PA 1..429 17..445 2145 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:20:48
Subject Length Description Subject Range Query Range Score Percent Strand
Obp44a-RB 1076 CG2297-RB 304..733 16..445 2150 100 Plus
Obp44a-RA 648 CG2297-RA 76..505 16..445 2150 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:20:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8134513..8134897 445..61 1925 100 Minus
2R 25286936 2R 8134966..8135012 62..16 235 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:20:47 has no hits.

BO13731.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:02:12 Download gff for BO13731.complete
Subject Subject Range Query Range Percent Splice Strand
Obp44a-RA 1..432 17..446 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:09:13 Download gff for BO13731.complete
Subject Subject Range Query Range Percent Splice Strand
Obp44a-RA 81..509 17..447 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:15 Download gff for BO13731.complete
Subject Subject Range Query Range Percent Splice Strand
Obp44a-RA 77..505 17..447 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:45:03 Download gff for BO13731.complete
Subject Subject Range Query Range Percent Splice Strand
Obp44a-RA 81..509 17..447 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:26:13 Download gff for BO13731.complete
Subject Subject Range Query Range Percent Splice Strand
Obp44a-RA 77..505 17..447 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:26:13 Download gff for BO13731.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8134511..8134896 62..447 99 <- Minus
2R 8134967..8135011 17..61 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:15 Download gff for BO13731.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4022016..4022401 62..447 99 <- Minus
arm_2R 4022472..4022516 17..61 100   Minus

BO13731.3prime Sequence

461 bp (460 high quality bases) assembled on 2006-05-08

> BO13731.3prime
ATGGTCTAGAAAGCTTGCGTTCTTCTGGACGGCGGCCTGCACGAGGGGCA
GGTTCTTGCCAAGGAAACACTTGAAGCCACGGAAGGCCCATTCGTTGGCG
GGCGACTTCTGCTCGTTCTTGTCGGCGCACTTCTCGATGTCGGCCTTCAG
CGCGGCCTTGTCCTCCTTGCCCTGGCCCAGTTGCGCCACCAGGTTCTCCA
CCTTGAAGCCCTTGGCCTCATCGAACAGGTCGAATTTGACGAAGATGCAC
TGGATGTAGTTGCGGGTGATGTCATCGTCGGGATAGTCGAAGGTCTTGTA
CTTGGCGATCAGGGCCTCGGTCACCTTGCTGCTGGCGGCACACTCCTTGC
GCGCGCTCTGCAGATCCTCGGCGGTGCGCAGCTTGTAGTCGGAGGCAGAG
GCCAGACCCAGCAGGGCGCACAGCAAAATAGCAACAGCGTTCTTCATGTC
GACTGATAACT

BO13731.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG2297-PA 432 Obp44a-RA 1..429 447..19 2120 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:21:41
Subject Length Description Subject Range Query Range Score Percent Strand
Obp44a-RB 1076 CG2297-RB 304..733 448..19 2135 99.8 Minus
Obp44a-RA 648 CG2297-RA 76..505 448..19 2135 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:21:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8134513..8134897 19..403 1925 100 Plus
2R 25286936 2R 8134966..8135012 402..448 220 97.9 Plus
Blast to na_te.dros performed on 2015-02-11 16:21:39 has no hits.

BO13731.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:11:01 Download gff for BO13731.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2297-PA 1..432 18..447 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:59:51 Download gff for BO13731.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2297-PA 1..432 18..447 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:38:39 Download gff for BO13731.3prime
Subject Subject Range Query Range Percent Splice Strand
Obp44a-RA 72..505 19..452 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:38:16 Download gff for BO13731.3prime
Subject Subject Range Query Range Percent Splice Strand
Obp44a-RA 72..505 19..452 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:38:16 Download gff for BO13731.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 8134513..8134896 19..402 100 <- Plus
2R 8134967..8135016 403..452 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:38:39 Download gff for BO13731.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4022018..4022401 19..402 100 <- Plus
arm_2R 4022472..4022521 403..452 94   Plus

BO13731.5prime Sequence

461 bp (460 high quality bases) assembled on 2006-05-08

> BO13731.5prime
GAAGTTATCAGTCGACATGAAGAACGCTGTTGCTATTCTGCTGTGCGCCC
TGCTGGGTCTGGCCTCTGCCTCCGACTACAAGCTGCGCACCGCCGAGGAT
CTGCAGAGCGCGCGCAAGGAGTGTGCCGCCAGCAGCAAGGTGACCGAGGC
CCTGATCGCCAAGTACAAGACCTTCGACTATCCCGACGATGACATCACCC
GCAACTACATCCAGTGCATCTTCGTCAAATTCGACCTGTTCGATGAGGCC
AAGGGCTTCAAGGTGGAGAACCTGGTGGCGCAACTGGGCCAGGGCAAGGA
GGACAAGGCCGCGCTGAAGGCCGACATCGAGAAGTGCGCCGACAAGAACG
AGCAGAAGTCGCCCGCCAACGAATGGGCCTTCCGTGGCTTCAAGTGTTTC
CTTGGCAAGAACCTGCCCCTCGTGCAGGCCGCCGTCCAGAAGAACGCAAG
CTTTCTAGACC

BO13731.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG2297-PA 432 Obp44a-RA 1..429 17..445 2145 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:33:35
Subject Length Description Subject Range Query Range Score Percent Strand
Obp44a-RB 1076 CG2297-RB 304..733 16..445 2150 100 Plus
Obp44a-RA 648 CG2297-RA 76..505 16..445 2150 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 23:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8134513..8134897 445..61 1925 100 Minus
2R 25286936 2R 8134966..8135012 62..16 235 100 Minus
Blast to na_te.dros performed on 2015-02-09 23:33:32 has no hits.

BO13731.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:11:02 Download gff for BO13731.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2297-PA 1..432 17..446 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:59:53 Download gff for BO13731.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2297-PA 1..432 17..446 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:28:53 Download gff for BO13731.5prime
Subject Subject Range Query Range Percent Splice Strand
Obp44a-RA 72..505 12..445 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:56:05 Download gff for BO13731.5prime
Subject Subject Range Query Range Percent Splice Strand
Obp44a-RA 72..505 12..445 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:56:05 Download gff for BO13731.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8134513..8134896 62..445 100 <- Minus
2R 8134967..8135016 12..61 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:28:53 Download gff for BO13731.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4022018..4022401 62..445 100 <- Minus
arm_2R 4022472..4022521 12..61 96   Minus

BO13731.pep Sequence

Translation from 16 to 463

> BO13731.pep
MKNAVAILLCALLGLASASDYKLRTAEDLQSARKECAASSKVTEALIAKY
KTFDYPDDDITRNYIQCIFVKFDLFDEAKGFKVENLVAQLGQGKEDKAAL
KADIEKCADKNEQKSPANEWAFRGFKCFLGKNLPLVQAAVQKNASFLDH

BO13731.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:53:04
Subject Length Description Subject Range Query Range Score Percent Strand
Obp44a-PB 143 CG2297-PB 1..143 1..143 732 100 Plus
Obp44a-PA 143 CG2297-PA 1..143 1..143 732 100 Plus
Obp99a-PB 142 CG18111-PB 3..142 5..144 280 41.8 Plus
Obp99a-PA 142 CG18111-PA 3..142 5..144 280 41.8 Plus
Obp99b-PB 149 CG7592-PB 3..148 7..141 216 34.9 Plus