Clone Sequence Records
BO13731.complete Sequence
463 bp assembled on 2010-02-09
GenBank Submission: FJ632919
> BO13731.complete
GAAGTTATCAGTCGACATGAAGAACGCTGTTGCTATTCTGCTGTGCGCCC
TGCTGGGTCTGGCCTCTGCCTCCGACTACAAGCTGCGCACCGCCGAGGAT
CTGCAGAGCGCGCGCAAGGAGTGTGCCGCCAGCAGCAAGGTGACCGAGGC
CCTGATCGCCAAGTACAAGACCTTCGACTATCCCGACGATGACATCACCC
GCAACTACATCCAGTGCATCTTCGTCAAATTCGACCTGTTCGATGAGGCC
AAGGGCTTCAAGGTGGAGAACCTGGTGGCGCAACTGGGCCAGGGCAAGGA
GGACAAGGCCGCGCTGAAGGCCGACATCGAGAAGTGCGCCGACAAGAACG
AGCAGAAGTCGCCCGCCAACGAATGGGCCTTCCGTGGCTTCAAGTGTTTC
CTTGGCAAGAACCTGCCCCTCGTGCAGGCCGCCGTCCAGAAGAACGCAAG
CTTTCTAGACCAT
BO13731.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:20:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp44a-RB | 432 | CG2297-PB | 1..429 | 17..445 | 2145 | 100 | Plus |
Obp44a-RA | 432 | CG2297-PA | 1..429 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:20:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp44a-RB | 1076 | CG2297-RB | 304..733 | 16..445 | 2150 | 100 | Plus |
Obp44a-RA | 648 | CG2297-RA | 76..505 | 16..445 | 2150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:20:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8134513..8134897 | 445..61 | 1925 | 100 | Minus |
2R | 25286936 | 2R | 8134966..8135012 | 62..16 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:20:47 has no hits.
BO13731.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:02:12 Download gff for
BO13731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp44a-RA | 1..432 | 17..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:09:13 Download gff for
BO13731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp44a-RA | 81..509 | 17..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:15 Download gff for
BO13731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp44a-RA | 77..505 | 17..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:45:03 Download gff for
BO13731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp44a-RA | 81..509 | 17..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:26:13 Download gff for
BO13731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp44a-RA | 77..505 | 17..447 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:26:13 Download gff for
BO13731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8134511..8134896 | 62..447 | 99 | <- | Minus |
2R | 8134967..8135011 | 17..61 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:15 Download gff for
BO13731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4022016..4022401 | 62..447 | 99 | <- | Minus |
arm_2R | 4022472..4022516 | 17..61 | 100 | | Minus |
BO13731.3prime Sequence
461 bp (460 high quality bases) assembled on 2006-05-08
> BO13731.3prime
ATGGTCTAGAAAGCTTGCGTTCTTCTGGACGGCGGCCTGCACGAGGGGCA
GGTTCTTGCCAAGGAAACACTTGAAGCCACGGAAGGCCCATTCGTTGGCG
GGCGACTTCTGCTCGTTCTTGTCGGCGCACTTCTCGATGTCGGCCTTCAG
CGCGGCCTTGTCCTCCTTGCCCTGGCCCAGTTGCGCCACCAGGTTCTCCA
CCTTGAAGCCCTTGGCCTCATCGAACAGGTCGAATTTGACGAAGATGCAC
TGGATGTAGTTGCGGGTGATGTCATCGTCGGGATAGTCGAAGGTCTTGTA
CTTGGCGATCAGGGCCTCGGTCACCTTGCTGCTGGCGGCACACTCCTTGC
GCGCGCTCTGCAGATCCTCGGCGGTGCGCAGCTTGTAGTCGGAGGCAGAG
GCCAGACCCAGCAGGGCGCACAGCAAAATAGCAACAGCGTTCTTCATGTC
GACTGATAACT
BO13731.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:09:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2297-PA | 432 | Obp44a-RA | 1..429 | 447..19 | 2120 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:21:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp44a-RB | 1076 | CG2297-RB | 304..733 | 448..19 | 2135 | 99.8 | Minus |
Obp44a-RA | 648 | CG2297-RA | 76..505 | 448..19 | 2135 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:21:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8134513..8134897 | 19..403 | 1925 | 100 | Plus |
2R | 25286936 | 2R | 8134966..8135012 | 402..448 | 220 | 97.9 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:21:39 has no hits.
BO13731.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:11:01 Download gff for
BO13731.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2297-PA | 1..432 | 18..447 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:59:51 Download gff for
BO13731.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2297-PA | 1..432 | 18..447 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:38:39 Download gff for
BO13731.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp44a-RA | 72..505 | 19..452 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:38:16 Download gff for
BO13731.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp44a-RA | 72..505 | 19..452 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:38:16 Download gff for
BO13731.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8134513..8134896 | 19..402 | 100 | <- | Plus |
2R | 8134967..8135016 | 403..452 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:38:39 Download gff for
BO13731.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4022018..4022401 | 19..402 | 100 | <- | Plus |
arm_2R | 4022472..4022521 | 403..452 | 94 | | Plus |
BO13731.5prime Sequence
461 bp (460 high quality bases) assembled on 2006-05-08
> BO13731.5prime
GAAGTTATCAGTCGACATGAAGAACGCTGTTGCTATTCTGCTGTGCGCCC
TGCTGGGTCTGGCCTCTGCCTCCGACTACAAGCTGCGCACCGCCGAGGAT
CTGCAGAGCGCGCGCAAGGAGTGTGCCGCCAGCAGCAAGGTGACCGAGGC
CCTGATCGCCAAGTACAAGACCTTCGACTATCCCGACGATGACATCACCC
GCAACTACATCCAGTGCATCTTCGTCAAATTCGACCTGTTCGATGAGGCC
AAGGGCTTCAAGGTGGAGAACCTGGTGGCGCAACTGGGCCAGGGCAAGGA
GGACAAGGCCGCGCTGAAGGCCGACATCGAGAAGTGCGCCGACAAGAACG
AGCAGAAGTCGCCCGCCAACGAATGGGCCTTCCGTGGCTTCAAGTGTTTC
CTTGGCAAGAACCTGCCCCTCGTGCAGGCCGCCGTCCAGAAGAACGCAAG
CTTTCTAGACC
BO13731.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:09:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2297-PA | 432 | Obp44a-RA | 1..429 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:33:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp44a-RB | 1076 | CG2297-RB | 304..733 | 16..445 | 2150 | 100 | Plus |
Obp44a-RA | 648 | CG2297-RA | 76..505 | 16..445 | 2150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 23:33:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8134513..8134897 | 445..61 | 1925 | 100 | Minus |
2R | 25286936 | 2R | 8134966..8135012 | 62..16 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 23:33:32 has no hits.
BO13731.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:11:02 Download gff for
BO13731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2297-PA | 1..432 | 17..446 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:59:53 Download gff for
BO13731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2297-PA | 1..432 | 17..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:28:53 Download gff for
BO13731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp44a-RA | 72..505 | 12..445 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:56:05 Download gff for
BO13731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp44a-RA | 72..505 | 12..445 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:56:05 Download gff for
BO13731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8134513..8134896 | 62..445 | 100 | <- | Minus |
2R | 8134967..8135016 | 12..61 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:28:53 Download gff for
BO13731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4022018..4022401 | 62..445 | 100 | <- | Minus |
arm_2R | 4022472..4022521 | 12..61 | 96 | | Minus |
BO13731.pep Sequence
Translation from 16 to 463
> BO13731.pep
MKNAVAILLCALLGLASASDYKLRTAEDLQSARKECAASSKVTEALIAKY
KTFDYPDDDITRNYIQCIFVKFDLFDEAKGFKVENLVAQLGQGKEDKAAL
KADIEKCADKNEQKSPANEWAFRGFKCFLGKNLPLVQAAVQKNASFLDH
BO13731.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:53:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp44a-PB | 143 | CG2297-PB | 1..143 | 1..143 | 732 | 100 | Plus |
Obp44a-PA | 143 | CG2297-PA | 1..143 | 1..143 | 732 | 100 | Plus |
Obp99a-PB | 142 | CG18111-PB | 3..142 | 5..144 | 280 | 41.8 | Plus |
Obp99a-PA | 142 | CG18111-PA | 3..142 | 5..144 | 280 | 41.8 | Plus |
Obp99b-PB | 149 | CG7592-PB | 3..148 | 7..141 | 216 | 34.9 | Plus |