Clone Sequence Records
BO13756.complete Sequence
397 bp assembled on 2008-11-10
GenBank Submission: KX797648
> BO13756.complete
GAAGTTATCAGTCGACATGAAATCGCTCGTTGTGTGCTCTTTGATCGGAT
TGGTCCTGCTTATGGCCGCTGGCCAAGTTCGTGCCGAGTGCGACGAGGCC
AAGAGTCCCGAGGACAGCGAATTCAAGCACTTCTTCAAGAACCTAGGCTG
CAAGGTCAACCAGGGGGCCAAGGAGGTGGCCGAGGCCGCCAAGCCCTACA
CCGACAAGATCGGCGAGGGCGCCAAGGAGTTTGGCAGCTCGGTGGCCCAG
AAGTACGACGAACTGAAGCACAAGCTGACCGATGAGCCATCGACCACGCC
CAAAATTCCAGTGGCCTATGACGCCCCCACCGAGAAGGTCCTTTTAGCCC
CCATCGGAGGACCCAGCACCCCGATCCCAGCAAGCTTTCTAGACCAT
BO13756.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:53:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9691-RA | 366 | CG9691-PA | 1..363 | 17..379 | 1815 | 100 | Plus |
CG9691-RB | 366 | CG9691-PB | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:53:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9691-RA | 534 | CG9691-RA | 61..423 | 17..379 | 1815 | 100 | Plus |
CG9691-RB | 603 | CG9691-RB | 61..423 | 17..379 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:53:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9884502..9884864 | 17..379 | 1815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:53:15 has no hits.
BO13756.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:17:00 Download gff for
BO13756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9691-RB | 55..423 | 11..379 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:57:50 Download gff for
BO13756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9691-RB | 61..423 | 17..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:26:23 Download gff for
BO13756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9691-RB | 61..423 | 17..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:57:15 Download gff for
BO13756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9691-RB | 61..423 | 17..381 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:57:15 Download gff for
BO13756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9884502..9884864 | 17..381 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:57:50 Download gff for
BO13756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9778535..9778897 | 17..381 | 99 | | Plus |
BO13756.5prime Sequence
395 bp (268 high quality bases) assembled on 2006-05-08
> BO13756.5prime
GAAGTTATCAGTCGACATGAAATCGCTCGTTGTGTGCTCTTTGATCGGAT
TGGTCCTGCTTATGGCCGCTGGCCAAGTTCGTGCCGAGTGCGACGAGGCC
AAGAGTCCCGAGGACAGCGAATTCTAGCACTTCTTCAAGAACCTAGGCTG
CAAGGTCAACCAGGGGGCCAAGGAGGTGGCCGAGGCCGCCAAGCCCTACA
CCGACAAGATCGGCGAGGGCGCCAAGGAGTTTGGCAGCTCGGTGGCCCAG
AAGTACGACGAACTGAAGCACAAGCTGACCGATGAGCCATCGACCACGCC
CAAAATTCCAGTGGCCTATGACGCCCCCACCGAGAAGGTCCTTTTAGCCC
CCATCGGAGGACCCAGCACCCCGATCCCAGCAAGCTTTCTAGACC
BO13756.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:10:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9691-PB | 366 | CG9691-RB | 1..363 | 17..379 | 1790 | 99.7 | Plus |
CG9691-PA | 366 | CG9691-RA | 1..363 | 17..379 | 1790 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:42:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9691-RA | 534 | CG9691-RA | 61..423 | 17..379 | 1800 | 99.7 | Plus |
CG9691-RB | 603 | CG9691-RB | 61..423 | 17..379 | 1800 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 23:42:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9884502..9884864 | 17..379 | 1800 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-09 23:42:19 has no hits.
BO13756.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:11:38 Download gff for
BO13756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9691-PA | 1..366 | 17..382 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:00:46 Download gff for
BO13756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9691-PA | 1..366 | 17..382 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:29:53 Download gff for
BO13756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9691-RB | 55..423 | 11..379 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:57:33 Download gff for
BO13756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9691-RB | 55..423 | 11..379 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:57:33 Download gff for
BO13756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9884496..9884864 | 11..379 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:29:53 Download gff for
BO13756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9778529..9778897 | 11..379 | 98 | | Plus |
BO13756.pep Sequence
Translation from 16 to 397
> BO13756.pep
MKSLVVCSLIGLVLLMAAGQVRAECDEAKSPEDSEFKHFFKNLGCKVNQG
AKEVAEAAKPYTDKIGEGAKEFGSSVAQKYDELKHKLTDEPSTTPKIPVA
YDAPTEKVLLAPIGGPSTPIPASFLDH
BO13756.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:08:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9691-PA | 121 | CG9691-PA | 1..121 | 1..121 | 625 | 100 | Plus |
CG9691-PB | 121 | CG9691-PB | 1..121 | 1..121 | 625 | 100 | Plus |