BO13782.complete Sequence
727 bp assembled on 2007-06-22
GenBank Submission: FJ632926
> BO13782.complete
GAAGTTATCAGTCGACATGAAAGTCACCCTGGCAATAGCGACTTTCTGCG
TGGTGATGGCCTGCAGCCATGCGGCCAGAACCACAACGACAACAGCGACC
AAGCCGGGTCGCTTCCTCTCACTGCCCGTGCCCGCCAAGTGCGCTAGCCG
TCCCAAGGAGTTCTCCTACCGCGGCAAAAACATGTTCCTAACCACCCACG
TGCCCGCGCTGGCCAACAAGAAGGTCGATTGGTTGGATGGTCGCAATCTG
TGCCGCGAGTACTGCATGGATCTGGTCGCCCTGGAGACTCAAGAGAAGAA
CAATCTGATCTTCCGCGTGATCCAGCAGAACGATGTGCCGTACATCTGGA
CGGCCGGACGTATCTGTGACTTTGCTGGCTGCGAGAATCGTCCAGATTTG
GAGCCCAAGACCGTCTATGGATGGTTCTGGTCCGCAACCCGCGAGAAGAT
CCAGGCCACCAACCGCATCCCACAGGGCTGGGGCTACAACCCATGGTCGC
AGACTGGCCACAAGAAGCGCCCGCAGCCGGACAACGCCGAATACGACATC
AACCAGACCAAGGAGCAGTGCCTGTCCGTGTTGAACAACGTGTACAACGA
TGGCATCGCCTGGCACGACGTGGCCTGCTACCACGAGAAGCCCGTCATCT
GTGAGGACAACGAGGAGCTGCTGCGCTATGTGGCGGCCACGAATCCCGGC
ATCCGTCTAGCAAGCTTTCTAGACCAT
BO13782.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:26:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Clect27-RB | 696 | CG3244-PB | 1..693 | 17..709 | 3450 | 99.9 | Plus |
| Clect27-RA | 696 | CG3244-PA | 1..693 | 17..709 | 3450 | 99.9 | Plus |
| CG6055-RB | 660 | CG6055-PB | 517..576 | 569..628 | 180 | 86.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:26:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Clect27-RB | 1652 | CG3244-RB | 481..1173 | 17..709 | 3450 | 99.9 | Plus |
| Clect27-RA | 1279 | CG3244-RA | 108..800 | 17..709 | 3450 | 99.9 | Plus |
| CG6055-RB | 1034 | CG6055-RB | 603..662 | 569..628 | 180 | 86.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:26:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4797079..4797638 | 709..150 | 2785 | 99.8 | Minus |
| 2L | 23513712 | 2L | 4799744..4799878 | 151..17 | 675 | 100 | Minus |
| 2L | 23513712 | 2L | 7472062..7472121 | 569..628 | 180 | 86.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:26:16 has no hits.
BO13782.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:08:03 Download gff for
BO13782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3244-RA | 1..696 | 17..710 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:24:30 Download gff for
BO13782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3244-RA | 101..806 | 10..715 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:31:17 Download gff for
BO13782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Clect27-RA | 108..800 | 17..711 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:08:03 Download gff for
BO13782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3244-RA | 101..806 | 10..715 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:18:42 Download gff for
BO13782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Clect27-RA | 108..800 | 17..711 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:18:42 Download gff for
BO13782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4799746..4799878 | 17..149 | 100 | | Minus |
| 2L | 4797077..4797638 | 150..711 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:31:17 Download gff for
BO13782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4797077..4797638 | 150..711 | 99 | <- | Minus |
| arm_2L | 4799746..4799878 | 17..149 | 100 | | Minus |
BO13782.pep Sequence
Translation from 16 to 727
> BO13782.pep
MKVTLAIATFCVVMACSHAARTTTTTATKPGRFLSLPVPAKCASRPKEFS
YRGKNMFLTTHVPALANKKVDWLDGRNLCREYCMDLVALETQEKNNLIFR
VIQQNDVPYIWTAGRICDFAGCENRPDLEPKTVYGWFWSATREKIQATNR
IPQGWGYNPWSQTGHKKRPQPDNAEYDINQTKEQCLSVLNNVYNDGIAWH
DVACYHEKPVICEDNEELLRYVAATNPGIRLASFLDH
BO13782.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:22:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Clect27-PB | 231 | CG3244-PB | 1..231 | 1..231 | 1274 | 100 | Plus |
| Clect27-PA | 231 | CG3244-PA | 1..231 | 1..231 | 1274 | 100 | Plus |
| CG6055-PB | 219 | CG6055-PB | 21..219 | 32..231 | 509 | 48.5 | Plus |
| CG6055-PA | 219 | CG6055-PA | 21..219 | 32..231 | 509 | 48.5 | Plus |
| CG4115-PA | 220 | CG4115-PA | 4..220 | 10..231 | 498 | 44.4 | Plus |
