Clone Sequence Records
BO13805.3prime Sequence
754 bp (690 high quality bases) assembled on 2006-05-08
> BO13805.3prime
ATGGTCTAGAAAGCTTGCCAGCGAGGATCTGGCCAAGCGGCGTCGCTGCG
CAGCCAGCGGAGTGCCCTCCTCGCGCAATTCGGCCAAGAGGGAGTCCTGC
CAGGGACGAAACAGGAGGCGCTTTGTCGCCAACAGGGAGGCGGAAGGCAA
GCGCAAGTATTGGTCGACGCGGTGCCAAAACTCCTGCGGCTCTCGCACCA
CACTGGCCACAAGGCCACACTGGAGGGCAATGCTGGAGCTCGCTTGATCG
CCCAGACGAAGCAGCCAGTGGACGTGTGGCACAGTCCAGCCGGGACCCAC
CTTGGTGCAGGGATCCAGGTGCGAGAAAGCGGGCACAAAGGCAGATAACT
CCGTTGCGAAGACCAGATCGCACAGGCTGCACACGCTCAGGCCCAGACCG
ACGCACTGCCTCTCCACAAAAGCCACTAGGAGTTTGCGGTGCACAAGCAG
CTTCTTGGCCAGCGAGCGCATCACAAAATTGGCCGCCTTCTCATGGATGT
ACTGCTCCTCGGCATCACCACTGCCCACAGCTTCTTCGTGGGAAGCGGTA
CGCCTACTCCTATTCTCCAGACCCTGTTTGAGAGCCAACGGTTCCATCTC
ACCGCCACATGCTGCAGAAAACTCGCCCGAGAGCACGACCACCTTAACGG
CGGCGTCTGCACTCGCCAGGTCCAGGGCGCGCATCAGCTCGTAGAGGGTT
CGGCGTTGCCAGCGCCGCTGGAAGCGTATGTGGAGCAGCCCAGAACGCTG
TTCG
BO13805.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:11:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14787-PA | 783 | CG14787-RA | 45..780 | 754..19 | 3680 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:20:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14787-RA | 870 | CG14787-RA | 76..811 | 754..19 | 3680 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:20:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1460866..1461601 | 19..754 | 3680 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:20:08 has no hits.
BO13805.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:12:44 Download gff for
BO13805.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-PA | 45..783 | 18..754 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:02:22 Download gff for
BO13805.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-PA | 45..783 | 18..754 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:57:31 Download gff for
BO13805.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-RA | 76..818 | 11..754 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:46:05 Download gff for
BO13805.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-RA | 76..818 | 11..754 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:46:05 Download gff for
BO13805.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1460859..1461601 | 11..754 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:57:31 Download gff for
BO13805.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1354892..1355634 | 11..754 | 99 | | Plus |
BO13805.5prime Sequence
812 bp (701 high quality bases) assembled on 2006-05-08
> BO13805.5prime
GAAGTGATCAGTCGACATGGCCACAAACGAGAGCTGCAAGCACTTCAGGG
AGCTGGTCGTCGAACAGCGTTCTGGGCTGCTCCACATACGCTTCCAGCGG
CGCTGGCAACGCCGAACCCTCTACGAGCTGATGCGCGCCCTGGACCTGGC
GAGTGCAGACGCCGCCGTTAAGGTGGTCGTGCTCTCGGGCGAGTTTTCTG
CAGCATGTGGCGGTGAGATGGAACCGTTGGCTCTCAAACAGGGTCTGGAG
AATAGGAGTAGGCGTACCGCTTCCCACGAAGAAGCTGTGGGCAGTGGTGA
TGCCGAGGAGCAGTACATCCATGAGAAGGCGGCCAATTTTGTGATGCGCT
CGCTGGCCAAGAAGCTGCTTGTGCACCGCAAACTCCTAGTGGCTTTTGTG
GAGAGGCAGTGCGTCGGTCTGGGCCTGAGCGTGTGCAGCCTGTGCGATCT
GGTCTTCGCAACGGAGTTATCTGCCTTTGTGCCCGCTTTCTCGCACCTGG
ATCCCTGCACCAAGGTGGGTCCCGGCTGGACTGTGCCACACGTCCACTGG
CTGCTTCGTCTGGGCGATCAAGCGAGCTCCAGCATTGCCCTCCAGTGTGG
CCTTGTGGCCAGTGTGGTGCGAGAGCCGCAGGAGTTTTGGCACCGCGTCG
ACCAATACTTGCGCTTGCCTTCCGCCTCCCTGTTGGCGACAAAGCGCCTC
CTGTTTCGTCCCTGGCAGGACTCCCTCTTGGCCGAATTGCGCGAGGAGGG
CACTCCGCTGGCTGCGCAGCGACGCCGCTTGGGCAGATCCTCGCTGGCAA
GCTTTCTAGACC
BO13805.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:11:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14787-PA | 783 | CG14787-RA | 1..780 | 17..796 | 3875 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:58:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14787-RA | 870 | CG14787-RA | 32..811 | 17..796 | 3885 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:58:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1460866..1461645 | 796..17 | 3885 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:58:53 has no hits.
BO13805.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:12:45 Download gff for
BO13805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-PA | 1..783 | 17..797 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:02:24 Download gff for
BO13805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-PA | 1..783 | 17..797 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:17:17 Download gff for
BO13805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-RA | 21..818 | 3..804 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:23:19 Download gff for
BO13805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-RA | 21..818 | 3..804 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:23:19 Download gff for
BO13805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1460859..1461656 | 3..804 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:17:17 Download gff for
BO13805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1354892..1355689 | 3..804 | 98 | | Minus |
BO13805.complete Sequence
814 bp assembled on 2008-08-15
GenBank Submission: FJ632929
> BO13805.complete
GAAGTTATCAGTCGACATGGCCACAAACGAGAGCTGCAAGCACTTCAGGG
AGCTGGTCGTCGAACAGCGTTCTGGGCTGCTCCACATACGCTTCCAGCGG
CGCTGGCAACGCCGAACCCTCTACGAGCTGATGCGCGCCCTGGACCTGGC
GAGTGCAGACGCCGCCGTTAAGGTGGTCGTGCTCTCGGGCGAGTTTTCTG
CAGCATGTGGCGGTGAGATGGAACCGTTGGCTCTCAAACAGGGTCTGGAG
AATAGGAGTAGGCGTACCGCTTCCCACGAAGAAGCTGTGGGCAGTGGTGA
TGCCGAGGAGCAGTACATCCATGAGAAGGCGGCCAATTTTGTGATGCGCT
CGCTGGCCAAGAAGCTGCTTGTGCACCGCAAACTCCTAGTGGCTTTTGTG
GAGAGGCAGTGCGTCGGTCTGGGCCTGAGCGTGTGCAGCCTGTGCGATCT
GGTCTTCGCAACGGAGTTATCTGCCTTTGTGCCCGCTTTCTCGCACCTGG
ATCCCTGCACCAAGGTGGGTCCCGGCTGGACTGTGCCACACGTCCACTGG
CTGCTTCGTCTGGGCGATCAAGCGAGCTCCAGCATTGCCCTCCAGTGTGG
CCTTGTGGCCAGTGTGGTGCGAGAGCCGCAGGAGTTTTGGCACCGCGTCG
ACCAATACTTGCGCTTGCCTTCCGCCTCCCTGTTGGCGACAAAGCGCCTC
CTGTTTCGTCCCTGGCAGGACTCCCTCTTGGCCGAATTGCGCGAGGAGGG
CACTCCGCTGGCTGCGCAGCGACGCCGCTTGGCCAGATCCTCGCTGGCAA
GCTTTCTAGACCAT
BO13805.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:59:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14787-RA | 783 | CG14787-PA | 1..780 | 17..796 | 3900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:59:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14787-RA | 870 | CG14787-RA | 32..811 | 17..796 | 3900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:59:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1460866..1461645 | 796..17 | 3900 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:59:25 has no hits.
BO13805.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:44:14 Download gff for
BO13805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-RA | 12..809 | 3..804 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:43:43 Download gff for
BO13805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-RA | 32..811 | 17..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:59:21 Download gff for
BO13805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-RA | 23..802 | 17..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:35:57 Download gff for
BO13805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-RA | 32..811 | 17..798 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:35:57 Download gff for
BO13805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1460864..1461645 | 17..798 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:43:43 Download gff for
BO13805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1354897..1355678 | 17..798 | 99 | | Minus |
BO13805.pep Sequence
Translation from 16 to 814
> BO13805.pep
MATNESCKHFRELVVEQRSGLLHIRFQRRWQRRTLYELMRALDLASADAA
VKVVVLSGEFSAACGGEMEPLALKQGLENRSRRTASHEEAVGSGDAEEQY
IHEKAANFVMRSLAKKLLVHRKLLVAFVERQCVGLGLSVCSLCDLVFATE
LSAFVPAFSHLDPCTKVGPGWTVPHVHWLLRLGDQASSSIALQCGLVASV
VREPQEFWHRVDQYLRLPSASLLATKRLLFRPWQDSLLAELREEGTPLAA
QRRRLARSSLASFLDH
BO13805.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:42:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14787-PA | 260 | CG14787-PA | 1..260 | 1..260 | 1330 | 100 | Plus |
