Clone Sequence Records
BO13821.5prime Sequence
380 bp (379 high quality bases) assembled on 2006-05-08
> BO13821.5prime
GAAGTTATCAGTCGACATGGCGATTGCGCAGGCGCGCAGGTCACTCATAC
GCCATGGACGCAGTGGTGGCGGCAAAAAGGGGATTAAGATATATATGATG
ATTTTCCTGACTAACCACTTTAGATCTTTGGCTACTTGGTTGTCACCTTA
CATCCCGTTTTTAATGATCCCCTCTAATATTTTTTGCATTTGCCACTGCT
TGCAAGTGACAAACACAACTGTACCTTCAATGGTGTTCAACTGTAGTTGT
ATTTACCGCCGTTATGGTGATTTGTCAGCAATTTTTAGCATGATTAATGA
ATGTTTCAATCCGGCGACACAACTCCCTCTTCCTCCAACCCACCGCTTTG
TTAGCCGAAATTCTGCAAGCTTTCTAGACC
BO13821.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:11:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32160-PA | 351 | CG32160-RA | 1..348 | 17..364 | 1715 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-13 08:17:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:17:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16310066..16310413 | 17..364 | 1725 | 99.7 | Plus |
Blast to na_te.dros performed 2015-02-13 08:17:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 2275..2348 | 190..118 | 115 | 63.5 | Minus |
BO13821.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:13:04 Download gff for
BO13821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32160-PA | 1..351 | 17..367 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:02:53 Download gff for
BO13821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32160-PA | 1..351 | 17..367 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:17:11 Download gff for
BO13821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16310061..16310413 | 9..364 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:17:11 Download gff for
BO13821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16310061..16310413 | 9..364 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:36:21 Download gff for
BO13821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16303161..16303513 | 9..364 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:36:21 Download gff for
BO13821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16303161..16303513 | 9..364 | 98 | | Plus |
BO13821.3prime Sequence
380 bp (379 high quality bases) assembled on 2006-05-08
> BO13821.3prime
ATGGTCTAGAAAGCTTGCAGAATTTCGGCTAACAAAGCGGTGGGTTGGAG
GAAGAGGGAGTTGTGTCGCCGGATTGAAACATTCATTAATCATGCTAAAA
ATTGCTGACAAATCACCATAACGGCGGTAAATACAACTACAGTTGAACAC
CATTGAAGGTACAGTTGTGTTTGTCACTTGCAAGCAGTGGCAAATGCAAA
AAATATTAGAGGGGATCATTAAAAACGGGATGTAAGGTGACAACCAAGTA
GCCAAAGATCTAAAGTGGTTAGTCAGGAAAATCATCATATATATCTTAAT
CCCCTTTTTGCCGCCACCACTGCGTCCATGGCGTATGAGTGACCTGCGCG
CCTGCGCAATCGCCATGTCGACTGATAACT
BO13821.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:11:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32160-PA | 351 | CG32160-RA | 1..348 | 366..19 | 1715 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 13:47:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:47:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16310066..16310413 | 366..19 | 1725 | 99.7 | Minus |
Blast to na_te.dros performed 2015-02-12 13:47:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 2275..2348 | 193..265 | 115 | 63.5 | Plus |
BO13821.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:13:03 Download gff for
BO13821.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32160-PA | 1..351 | 16..366 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:02:51 Download gff for
BO13821.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32160-PA | 1..351 | 16..366 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:06:57 Download gff for
BO13821.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16310061..16310413 | 19..374 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:06:57 Download gff for
BO13821.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16310061..16310413 | 19..374 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 12:36:29 Download gff for
BO13821.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16303161..16303513 | 19..374 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 12:36:29 Download gff for
BO13821.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16303161..16303513 | 19..374 | 98 | | Minus |
BO13821.complete Sequence
382 bp assembled on 2006-10-11
GenBank Submission: FJ632937
> BO13821.complete
GAAGTTATCAGTCGACATGGCGATTGCGCAGGCGCGCAGGTCACTCATAC
GCCATGGACGCAGTGGTGGCGGCAAAAAGGGGATTAAGATATATATGATG
ATTTTCCTGACTAACCACTTTAGATCTTTGGCTACTTGGTTGTCACCTTA
CATCCCGTTTTTAATGATCCCCTCTAATATTTTTTGCATTTGCCACTGCT
TGCAAGTGACAAACACAACTGTACCTTCAATGGTGTTCAACTGTAGTTGT
ATTTACCGCCGTTATGGTGATTTGTCAGCAATTTTTAGCATGATTAATGA
ATGTTTCAATCCGGCGACACAACTCCCTCTTCCTCCAACCCACCGCTTTG
TTAGCCGAAATTCTGCAAGCTTTCTAGACCAT
BO13821.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 07:43:33 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 07:43:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:43:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16310066..16310413 | 17..364 | 1725 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-27 07:43:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 2275..2348 | 190..118 | 115 | 63.5 | Minus |
BO13821.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:58:46 Download gff for
BO13821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32160-RA | 1..351 | 17..367 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:30:48 Download gff for
BO13821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32160-RA | 881..1233 | 9..364 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:58:46 Download gff for
BO13821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32160-RA | 881..1233 | 9..364 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:15:55 Download gff for
BO13821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16310066..16310413 | 17..366 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:15:55 Download gff for
BO13821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16310066..16310413 | 17..366 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:21:20 Download gff for
BO13821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16303166..16303513 | 17..366 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:21:20 Download gff for
BO13821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16303166..16303513 | 17..366 | 99 | | Plus |
BO13821.pep Sequence
Translation from 16 to 382
> BO13821.pep
MAIAQARRSLIRHGRSGGGKKGIKIYMMIFLTNHFRSLATWLSPYIPFLM
IPSNIFCICHCLQVTNTTVPSMVFNCSCIYRRYGDLSAIFSMINECFNPA
TQLPLPPTHRFVSRNSASFLDH
Sequence BO13821.pep has no blast hits.