Clone Sequence Records
BO13869.3prime Sequence
551 bp (550 high quality bases) assembled on 2006-05-08
> BO13869.3prime
ATGGTCTAGAAAGCTTGCATCTCGGGAGTCCTCCTCGCTGCCGCTTACGT
GTGTGTAGAGGGCCAAGTCGTAGAACTGCCAGCGCTGCGGCTGACCTTCG
TCCACTCGGTAGCTGAGACATCGTGTCTCGAACAGGTCGGCCTGCTTCTC
CTGGCAGGAAACGATGGGATGCCCGTAGCCAAAGCACACCTCCTTGGTGT
TGAAGTAGATTTTGCCAAGAGCCAGGGAGTGTCCGTTTCGCAGAGCGGTG
AGGCAGTTCCGGAAGGCCGACTCGCAGGCACACGAGAATATGGGGAAAAA
CCCGTCGTTTCTCAGGCCAAAGGCTTCCTCCAGCGGCGGAATCTTCTCCT
CACAGTTGTCGTGCGCCCGGCAGCACGTGTCCACTTCGCGCTCAGTGCCC
AGGTCATCGTAGTTGGCTGCTATGTTCCCGGGTCCACACCACTTTGTGCC
CGGAACTGTAATGCTCAATCCCGCAGCCGCATGGCTGGCATAGATCAGCG
TTAGGAGAACAGTAAGAAAAGCGGCACGCGAAAGCATGTCGACTGATAAC
T
BO13869.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:12:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30503-PA | 522 | CG30503-RA | 1..519 | 537..19 | 2595 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:20:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30503-RB | 1842 | CG30503-RB | 1133..1651 | 537..19 | 2595 | 100 | Minus |
CG30503-RA | 741 | CG30503-RA | 32..550 | 537..19 | 2595 | 100 | Minus |
kappaB-Ras-RB | 1842 | CG1669-RB | 1133..1651 | 537..19 | 2595 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:20:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7444015..7444285 | 19..289 | 1355 | 100 | Plus |
2R | 25286936 | 2R | 7444349..7444596 | 290..537 | 1240 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:20:26 has no hits.
BO13869.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:14:15 Download gff for
BO13869.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30503-PA | 1..522 | 16..537 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:04:35 Download gff for
BO13869.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30503-PA | 1..522 | 16..537 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:38:25 Download gff for
BO13869.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30503-RA | 26..557 | 11..544 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:38:06 Download gff for
BO13869.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kappaB-Ras-RB | 1127..1658 | 11..544 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:38:06 Download gff for
BO13869.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7444011..7444285 | 19..289 | 98 | <- | Plus |
2R | 7444349..7444602 | 290..544 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:38:25 Download gff for
BO13869.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3331516..3331790 | 19..289 | 98 | <- | Plus |
arm_2R | 3331854..3332107 | 290..544 | 98 | | Plus |
BO13869.5prime Sequence
551 bp (550 high quality bases) assembled on 2006-05-08
> BO13869.5prime
GAAGTTATCAGTCGACATGCTTTCGCGTGCCGCTTTTCTTACTGTTCTCC
TAACGCTGATCTATGCCAGCCATGCGGCTGCGGGATTGAGCATTACAGTT
CCGGGCACAAAGTGGTGTGGACCCGGGAACATAGCAGCCAACTACGATGA
CCTGGGCACTGAGCGCGAAGTGGACACGTGCTGCCGGGCGCACGACAACT
GTGAGGAGAAGATTCCGCCGCTGGAGGAAGCCTTTGGCCTGAGAAACGAC
GGGTTTTTCCCCATATTCTCGTGTGCCTGCGAGTCGGCCTTCCGGAACTG
CCTCACCGCTCTGCGAAACGGACACTCCCTGGCTCTTGGCAAAATCTACT
TCAACACCAAGGAGGTGTGCTTTGGCTACGGGCATCCCATCGTTTCCTGC
CAGGAGAAGCAGGCCGACCTGTTCGAGACACGATGTCTCAGCTACCGAGT
GGACGAAGGTCAGCCGCAGCGCTGGCAGTTCTACGACTTGGCCCTCTACA
CACACGTAAGCGGCAGCGAGGAGGACTCCCGAGATGCAAGCTTTCTAGAC
C
BO13869.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:12:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30503-PA | 522 | CG30503-RA | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:09:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30503-RB | 1842 | CG30503-RB | 1133..1651 | 17..535 | 2595 | 100 | Plus |
CG30503-RA | 741 | CG30503-RA | 32..550 | 17..535 | 2595 | 100 | Plus |
kappaB-Ras-RB | 1842 | CG1669-RB | 1133..1651 | 17..535 | 2595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:09:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7444015..7444285 | 535..265 | 1355 | 100 | Minus |
2R | 25286936 | 2R | 7444349..7444596 | 264..17 | 1240 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:09:10 has no hits.
BO13869.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:14:16 Download gff for
BO13869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30503-PA | 1..522 | 17..538 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:04:36 Download gff for
BO13869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30503-PA | 1..522 | 17..538 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:15:23 Download gff for
BO13869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30503-RA | 26..557 | 10..543 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:46:21 Download gff for
BO13869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kappaB-Ras-RB | 1127..1658 | 10..543 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:46:21 Download gff for
BO13869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7444011..7444285 | 265..535 | 98 | <- | Minus |
2R | 7444349..7444602 | 10..264 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:15:23 Download gff for
BO13869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3331516..3331790 | 265..535 | 98 | <- | Minus |
arm_2R | 3331854..3332107 | 10..264 | 98 | | Minus |
BO13869.complete Sequence
553 bp assembled on 2006-10-11
GenBank Submission: FJ632960
> BO13869.complete
GAAGTTATCAGTCGACATGCTTTCGCGTGCCGCTTTTCTTACTGTTCTCC
TAACGCTGATCTATGCCAGCCATGCGGCTGCGGGATTGAGCATTACAGTT
CCGGGCACAAAGTGGTGTGGACCCGGGAACATAGCAGCCAACTACGATGA
CCTGGGCACTGAGCGCGAAGTGGACACGTGCTGCCGGGCGCACGACAACT
GTGAGGAGAAGATTCCGCCGCTGGAGGAAGCCTTTGGCCTGAGAAACGAC
GGGTTTTTCCCCATATTCTCGTGTGCCTGCGAGTCGGCCTTCCGGAACTG
CCTCACCGCTCTGCGAAACGGACACTCCCTGGCTCTTGGCAAAATCTACT
TCAACACCAAGGAGGTGTGCTTTGGCTACGGGCATCCCATCGTTTCCTGC
CAGGAGAAGCAGGCCGACCTGTTCGAGACACGATGTCTCAGCTACCGAGT
GGACGAAGGTCAGCCGCAGCGCTGGCAGTTCTACGACTTGGCCCTCTACA
CACACGTAAGCGGCAGCGAGGAGGACTCCCGAGATGCAAGCTTTCTAGAC
CAT
BO13869.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:12:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30503-RB | 522 | CG30503-PB | 1..519 | 17..535 | 2595 | 100 | Plus |
CG30503-RA | 522 | CG30503-PA | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:12:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30503-RB | 1842 | CG30503-RB | 1133..1651 | 17..535 | 2595 | 100 | Plus |
CG30503-RA | 741 | CG30503-RA | 32..550 | 17..535 | 2595 | 100 | Plus |
kappaB-Ras-RB | 1842 | CG1669-RB | 1133..1651 | 17..535 | 2595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:12:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7444015..7444285 | 535..265 | 1355 | 100 | Minus |
2R | 25286936 | 2R | 7444349..7444596 | 264..17 | 1240 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:12:51 has no hits.
BO13869.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:24:02 Download gff for
BO13869.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30503-RB | 1..522 | 17..538 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:58:06 Download gff for
BO13869.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30503-RB | 1096..1627 | 10..543 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:08:53 Download gff for
BO13869.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30503-RA | 32..550 | 17..537 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:24:02 Download gff for
BO13869.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30503-RB | 1096..1627 | 10..543 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:05:53 Download gff for
BO13869.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kappaB-Ras-RB | 1133..1651 | 17..537 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:05:53 Download gff for
BO13869.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7444012..7444285 | 265..537 | 99 | <- | Minus |
2R | 7444349..7444596 | 17..264 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:08:53 Download gff for
BO13869.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3331517..3331790 | 265..537 | 99 | <- | Minus |
arm_2R | 3331854..3332101 | 17..264 | 100 | | Minus |
BO13869.pep Sequence
Translation from 16 to 553
> BO13869.pep
MLSRAAFLTVLLTLIYASHAAAGLSITVPGTKWCGPGNIAANYDDLGTER
EVDTCCRAHDNCEEKIPPLEEAFGLRNDGFFPIFSCACESAFRNCLTALR
NGHSLALGKIYFNTKEVCFGYGHPIVSCQEKQADLFETRCLSYRVDEGQP
QRWQFYDLALYTHVSGSEEDSRDASFLDH
BO13869.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:40:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30503-PB | 173 | CG30503-PB | 1..173 | 1..173 | 942 | 100 | Plus |
CG30503-PA | 173 | CG30503-PA | 1..173 | 1..173 | 942 | 100 | Plus |
sPLA2-PC | 186 | CG11124-PC | 43..180 | 26..162 | 396 | 50 | Plus |
sPLA2-PA | 186 | CG11124-PA | 43..180 | 26..162 | 396 | 50 | Plus |
CG3009-PD | 239 | CG3009-PD | 92..196 | 16..119 | 225 | 42.9 | Plus |