Clone Sequence Records
BO13926.3prime Sequence
551 bp (550 high quality bases) assembled on 2006-05-08
> BO13926.3prime
ATGGTCTAGAAAGCTTGCGAGCTGGCTGTTGGCCAGGTGGTTGTCGATGA
CCCGCTGGATGATCATCAAGCAGTGGCGCTGCCTGGCCACCGTGTTGTCG
ATCAGCTGTTCCGTGAACTGACTGGCCGCAATGTTCGTGTTGGGCGGTAT
ATCCTGCGTGCAGGATATGTACCTGTTGAAGATCTCCGTGTTCAGCGACG
TGGCCAGATACCGCTCGCTCTCGTCCTGCTGCTGCAGCTTGTCCAGCTCC
TGGGCGGCCAGCAACAGCTGATCCTTGGCCTTCTGATATGATTGCAGCTC
CTGCAGGCTGGCATACTCGGCGCTGCTCAGTTTCACGGACCTGCCGCCGT
CTTTCGTCATCTGGCGAATGTGGTACTTGCGCTCGGCCACAAAATTACCG
AGCAAGTATCCTGTTATCAGCATGAAGAAGCCAATCGTTAGCACCAGGGA
GGCACAGGTGCGCTTGGAAACGTACTCGCGGAACTCCCGAGAGCTGTTGG
CCCGCACCGCCGTCTCGTAGCTGAGTACCTGGTGCATGTCGACTGATAAC
T
BO13926.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:12:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15522-PA | 522 | CG15522-RA | 1..519 | 537..19 | 2595 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:21:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15522-RB | 1381 | CG15522-RB | 669..1187 | 537..19 | 2595 | 100 | Minus |
CG15522-RA | 1101 | CG15522-RA | 389..907 | 537..19 | 2595 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:21:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29928178..29928572 | 413..19 | 1975 | 100 | Minus |
3R | 32079331 | 3R | 29927995..29928122 | 537..410 | 640 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 12:21:11 has no hits.
BO13926.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:15:23 Download gff for
BO13926.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15522-PA | 1..522 | 18..537 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:06:08 Download gff for
BO13926.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15522-PA | 1..522 | 18..537 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:13:51 Download gff for
BO13926.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15522-RA | 383..918 | 6..547 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:08:28 Download gff for
BO13926.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15522-RA | 383..918 | 6..547 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:08:28 Download gff for
BO13926.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29927989..29928121 | 411..547 | 97 | -> | Minus |
3R | 29928181..29928583 | 6..410 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:13:51 Download gff for
BO13926.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25753711..25753843 | 411..547 | 97 | -> | Minus |
arm_3R | 25753903..25754305 | 6..410 | 98 | | Minus |
BO13926.5prime Sequence
551 bp (550 high quality bases) assembled on 2006-05-08
> BO13926.5prime
GAAGTTATCAGTCGACATGCACCAGGTACTCAGCTACGAGACGGCGGTGC
GGGCCAACAGCTCTCGGGAGTTCCGCGAGTACGTTTCCAAGCGCACCTGT
GCCTCCCTGGTGCTAACGATTGGCTTCTTCATGCTGATAACAGGATACTT
GCTCGGTAATTTTGTGGCCGAGCGCAAGTACCACATTCGCCAGATGACGA
AAGACGGCGGCAGGTCCGTGAAACTGAGCAGCGCCGAGTATGCCAGCCTG
CAGGAGCTGCAATCATATCAGAAGGCCAAGGATCAGCTGTTGCTGGCCGC
CCAGGAGCTGGACAAGCTGCAGCAGCAGGACGAGAGCGAGCGGTATCTGG
CCACGTCGCTGAACACGGAGATCTTCAACAGGTACATATCCTGCACGCAG
GATATACCGCCCAACACGAACATTGCGGCCAGTCAGTTCACGGAACAGCT
GATCGACAACACGGTGGCCAGGCAGCGCCACTGCTTGATGATCATCCAGC
GGGTCATCGACAACCACCTGGCCAACAGCCAGCTCGCAAGCTTTCTAGAC
C
BO13926.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:13:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15522-PA | 522 | CG15522-RA | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:08:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15522-RB | 1381 | CG15522-RB | 669..1187 | 17..535 | 2595 | 100 | Plus |
CG15522-RA | 1101 | CG15522-RA | 389..907 | 17..535 | 2595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 09:08:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29928178..29928572 | 141..535 | 1975 | 100 | Plus |
3R | 32079331 | 3R | 29927995..29928122 | 17..144 | 640 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 09:08:21 has no hits.
BO13926.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:15:24 Download gff for
BO13926.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15522-PA | 1..522 | 17..536 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:06:09 Download gff for
BO13926.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15522-PA | 1..522 | 17..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:53:06 Download gff for
BO13926.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15522-RA | 383..918 | 7..548 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:12:24 Download gff for
BO13926.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15522-RA | 383..918 | 7..548 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:12:24 Download gff for
BO13926.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29927989..29928121 | 7..143 | 97 | -> | Plus |
3R | 29928181..29928583 | 144..548 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:53:06 Download gff for
BO13926.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25753711..25753843 | 7..143 | 97 | -> | Plus |
arm_3R | 25753903..25754305 | 144..548 | 98 | | Plus |
BO13926.complete Sequence
553 bp assembled on 2006-10-11
GenBank Submission: FJ632977
> BO13926.complete
GAAGTTATCAGTCGACATGCACCAGGTACTCAGCTACGAGACGGCGGTGC
GGGCCAACAGCTCTCGGGAGTTCCGCGAGTACGTTTCCAAGCGCACCTGT
GCCTCCCTGGTGCTAACGATTGGCTTCTTCATGCTGATAACAGGATACTT
GCTCGGTAATTTTGTGGCCGAGCGCAAGTACCACATTCGCCAGATGACGA
AAGACGGCGGCAGGTCCGTGAAACTGAGCAGCGCCGAGTATGCCAGCCTG
CAGGAGCTGCAATCATATCAGAAGGCCAAGGATCAGCTGTTGCTGGCCGC
CCAGGAGCTGGACAAGCTGCAGCAGCAGGACGAGAGCGAGCGGTATCTGG
CCACGTCGCTGAACACGGAGATCTTCAACAGGTACATATCCTGCACGCAG
GATATACCGCCCAACACGAACATTGCGGCCAGTCAGTTCACGGAACAGCT
GATCGACAACACGGTGGCCAGGCAGCGCCACTGCTTGATGATCATCCAGC
GGGTCATCGACAACCACCTGGCCAACAGCCAGCTCGCAAGCTTTCTAGAC
CAT
BO13926.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:17:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15522-RB | 522 | CG15522-PB | 1..519 | 17..535 | 2595 | 100 | Plus |
CG15522-RA | 522 | CG15522-PA | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:17:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15522-RB | 1381 | CG15522-RB | 669..1187 | 17..535 | 2595 | 100 | Plus |
CG15522-RA | 1101 | CG15522-RA | 389..907 | 17..535 | 2595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:17:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29928178..29928572 | 141..535 | 1975 | 100 | Plus |
3R | 32079331 | 3R | 29927995..29928122 | 17..144 | 640 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:17:50 has no hits.
BO13926.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:23:21 Download gff for
BO13926.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15522-RA | 1..522 | 17..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:57:08 Download gff for
BO13926.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15522-RA | 386..921 | 7..548 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:17:22 Download gff for
BO13926.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15522-RA | 389..907 | 17..537 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:23:21 Download gff for
BO13926.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15522-RA | 386..921 | 7..548 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:18:08 Download gff for
BO13926.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15522-RA | 389..907 | 17..537 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:18:08 Download gff for
BO13926.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29927995..29928121 | 17..143 | 100 | -> | Plus |
3R | 29928181..29928572 | 144..537 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:17:22 Download gff for
BO13926.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25753717..25753843 | 17..143 | 100 | -> | Plus |
arm_3R | 25753903..25754294 | 144..537 | 99 | | Plus |
BO13926.pep Sequence
Translation from 16 to 553
> BO13926.pep
MHQVLSYETAVRANSSREFREYVSKRTCASLVLTIGFFMLITGYLLGNFV
AERKYHIRQMTKDGGRSVKLSSAEYASLQELQSYQKAKDQLLLAAQELDK
LQQQDESERYLATSLNTEIFNRYISCTQDIPPNTNIAASQFTEQLIDNTV
ARQRHCLMIIQRVIDNHLANSQLASFLDH
BO13926.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:41:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15522-PB | 173 | CG15522-PB | 1..173 | 1..173 | 868 | 100 | Plus |
CG15522-PA | 173 | CG15522-PA | 1..173 | 1..173 | 868 | 100 | Plus |