Clone Sequence Records
BO13950.5prime Sequence
359 bp (358 high quality bases) assembled on 2006-05-08
> BO13950.5prime
GAAGTTATCAGTCGACATGTTCTCGCCCTCACGTGCCCTGCGCCCAGCCC
TCAGCCGCTGCTACAGCCAGATCAAGGGCGGACCCGTTTCCGGCGGCGGT
AGACCCAGCGCCTCAGGATCTCCAGCTGGAGCCGGATCCTCGCCATCGGG
CGGCGCATCCTCGCCATCGGTTGTGGGACTGACCAGCAATTGCGTGAAGC
CCAGCAGCGGACCCGTTGGACCAGGTGCCTCCGCCACCGGTGGCTACAAG
GTGCCTGAATACTACAGCTTCAATCGCTTTAGCTACGCCGAGGCGGAGGT
GGAAATGGCCAAGTACCGCTGCCCACAGCCCTCGGCCCTCAAGGCAAGCT
TTCTAGACC
BO13950.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:13:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11752-PA | 330 | CG11752-RA | 1..327 | 17..343 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:29:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11752-RA | 477 | CG11752-RA | 97..425 | 15..343 | 1645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:29:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11350094..11350422 | 15..343 | 1645 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:29:20 has no hits.
BO13950.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:15:53 Download gff for
BO13950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-PA | 1..330 | 17..344 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:06:53 Download gff for
BO13950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-PA | 1..330 | 17..344 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:40:32 Download gff for
BO13950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 88..425 | 5..343 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:39:48 Download gff for
BO13950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 88..425 | 5..343 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:39:48 Download gff for
BO13950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11350085..11350422 | 5..343 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:40:32 Download gff for
BO13950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11244118..11244455 | 5..343 | 98 | | Plus |
BO13950.complete Sequence
361 bp assembled on 2006-10-11
GenBank Submission: FJ632981
> BO13950.complete
GAAGTTATCAGTCGACATGTTCTCGCCCTCACGTGCCCTGCGCCCAGCCC
TCAGCCGCTGCTACAGCCAGATCAAGGGCGGACCCGTTTCCGGCGGCGGT
AGACCCAGCGCCTCAGGATCTCCAGCTGGAGCCGGATCCTCGCCATCGGG
CGGCGCATCCTCGCCATCGGTTGTGGGACTGACCAGCAATTGCGTGAAGC
CCAGCAGCGGACCCGTTGGACCAGGTGCCTCCGCCACCGGTGGCTACAAG
GTGCCTGAATACTACAGCTTCAATCGCTTTAGCTACGCCGAGGCGGAGGT
GGAAATGGCCAAGTACCGCTGCCCACAGCCCTCGGCCCTCAAGGCAAGCT
TTCTAGACCAT
BO13950.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:44:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11752-RA | 330 | CG11752-PA | 1..327 | 17..343 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:44:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11752-RA | 477 | CG11752-RA | 97..425 | 15..343 | 1645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:44:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11350094..11350422 | 15..343 | 1645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:44:30 has no hits.
BO13950.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:23:24 Download gff for
BO13950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 1..330 | 17..344 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:57:14 Download gff for
BO13950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 87..424 | 5..343 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:44:46 Download gff for
BO13950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 104..425 | 22..345 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:23:24 Download gff for
BO13950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 87..424 | 5..343 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:51:47 Download gff for
BO13950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 104..425 | 22..345 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:51:47 Download gff for
BO13950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11350101..11350422 | 22..345 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:44:46 Download gff for
BO13950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11244134..11244455 | 22..345 | 99 | | Plus |
BO13950.pep Sequence
Translation from 16 to 361
> BO13950.pep
MFSPSRALRPALSRCYSQIKGGPVSGGGRPSASGSPAGAGSSPSGGASSP
SVVGLTSNCVKPSSGPVGPGASATGGYKVPEYYSFNRFSYAEAEVEMAKY
RCPQPSALKASFLDH
BO13950.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:41:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11752-PA | 109 | CG11752-PA | 1..109 | 1..109 | 571 | 100 | Plus |
