Clone BO14013 Report

Search the DGRC for BO14013

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:140
Well:13
Vector:pDNR-Dual
Associated Gene/TranscriptCG14777-RB
Protein status:BO14013.pep: validated full length
Sequenced Size:622

Clone Sequence Records

BO14013.3prime Sequence

620 bp (619 high quality bases) assembled on 2006-05-29

> BO14013.3prime
ATGGTCTAGAAAGCTTGCTGTACAAGGCAGAACCGCGGAGTTCGACTGCT
CCTCGTGGTGCGTCTTCATGTACGCCAGGAAAATTGTCCACATCAGGCTG
CAAATGCTTACAAACACCACGCGGTTGTGTTCCGGCACCAGCGAGAAGTT
AATGGTCTGCAGGATAGGCCAGATGCATACGCCGACCTTGTACGTGGGCG
CCGCCTTCTCCTTCGTCTCTTCCACGGCCTGACTAAAGGTCTTCAGCTCC
AGCAAGCTCATTCCCATGAAAAAGCTTACGCAAGCGAATGGTCCGTAGGA
AAGCTGTTCCGTGATGGCCTTAACGATGCCCGTGCGCAGATTAGTCTGCG
GCCACATGGCGCTGGTGAGCCGCACCCAGCCGTACAGAGTGGGCGCCACG
TACAGAGCTCCAAACAAGCTGAAACGTAACGCCCTGGCCCAGTCGTACTC
GCGCAGCTTGCGTCCCTCCATAGCCTGCTGGATCAGGCTGCCCGCCGGCC
ACATGACCGCGTACGTGAGCGCGCCCTTGGCCATGGGATGCAGCTTGCTC
CCTCGACGCCACTGGCCCAGCGAGGCCTGCAACAGCTTGACGGCCGCAGG
CACCATGTCGACTGATAACT

BO14013.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG14777-PB 591 CG14777-RB 1..588 606..19 2915 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:08:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG14777-RF 1474 CG14777-RF 809..1396 606..19 2925 99.8 Minus
CG14777-RC 799 CG14777-RC 134..721 606..19 2925 99.8 Minus
CG14777-RE 855 CG14777-RE 190..777 606..19 2925 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:08:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1468445..1468614 188..19 835 99.4 Minus
X 23542271 X 1467811..1467965 606..452 775 100 Minus
X 23542271 X 1468249..1468384 320..185 680 100 Minus
X 23542271 X 1468052..1468186 452..318 675 100 Minus
Blast to na_te.dros performed on 2015-02-11 16:08:21 has no hits.

BO14013.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:17:04 Download gff for BO14013.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14777-PB 1..591 18..606 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:08:36 Download gff for BO14013.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14777-PB 1..591 18..606 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:36:24 Download gff for BO14013.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14777-RD 233..832 11..616 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:36:23 Download gff for BO14013.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14777-RE 183..782 11..616 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:36:23 Download gff for BO14013.3prime
Subject Subject Range Query Range Percent Splice Strand
X 1467804..1467964 453..616 97 -> Minus
X 1468052..1468185 319..452 100 -> Minus
X 1468251..1468382 187..318 100 -> Minus
X 1468447..1468609 24..186 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:36:24 Download gff for BO14013.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1361837..1361997 453..616 97 -> Minus
arm_X 1362085..1362218 319..452 100 -> Minus
arm_X 1362284..1362415 187..318 100 -> Minus
arm_X 1362480..1362642 24..186 99 -> Minus

BO14013.5prime Sequence

620 bp (619 high quality bases) assembled on 2006-05-29

> BO14013.5prime
GAAGTTATCAGTCGACATGGTGCCTGCGGCCGTCAAGCTGTTGCAGGCCT
CGCTGGGCCAGTGGCGTCGAGGGAGCAAGCTGCATCCCATGGCCAAGGGC
GCGCTCACGTACGCGGTCATGTGGCCGGCGGGCAGCCTGATCCAGCAGGC
TATGGAGGGACGCAAGCTGCGCGAGTACGACTGGGCCAGGGCGTTACGTT
TCAGCTTGTTTGGAGCTCTGTACGTGGCGCCCACTCTGTACGGCTGGGTG
CGGCTCACCAGCGCCATGTGGCCGCAGACTAATCTGCGCACGGGCATCGT
TAAGGCCATCACGGAACAGCTTTCCTACGGACCATTCGCTTGCGTAAGCT
TTTTCATGGGAATGAGCTTGCTGGAGCTGAAGACCTTTAGTCAGGCCGTG
GAAGAGACGAAGGAGAAGGCGGCGCCCACGTACAAGGTCGGCGTATGCAT
CTGGCCTATCCTGCAGACCATTAACTTCTCGCTGGTGCCGGAACACAACC
GCGTGGTGTTTGTAAGCATTTGCAGCCTGATGTGGACAATTTTCCTGGCG
TACATGAAGACGCACCACGAGGAGCAGTCGAACTCCGCGGTTCTGCCTTG
TACAGCAAGCTTTCTAGACC

BO14013.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14777-PB 591 CG14777-RB 1..588 17..604 2915 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:27:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG14777-RF 1474 CG14777-RF 809..1396 17..604 2925 99.8 Plus
CG14777-RC 799 CG14777-RC 134..721 17..604 2925 99.8 Plus
CG14777-RE 855 CG14777-RE 190..777 17..604 2925 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:26:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1468445..1468614 435..604 835 99.4 Plus
X 23542271 X 1467811..1467965 17..171 775 100 Plus
X 23542271 X 1468249..1468384 303..438 680 100 Plus
X 23542271 X 1468052..1468186 171..305 675 100 Plus
Blast to na_te.dros performed on 2015-02-11 13:27:01 has no hits.

BO14013.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:17:05 Download gff for BO14013.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14777-PB 1..591 17..605 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:08:38 Download gff for BO14013.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14777-PB 1..591 17..605 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:12:33 Download gff for BO14013.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14777-RD 233..832 7..612 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:58:02 Download gff for BO14013.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14777-RE 183..782 7..612 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:58:02 Download gff for BO14013.5prime
Subject Subject Range Query Range Percent Splice Strand
X 1467804..1467964 7..170 97 -> Plus
X 1468052..1468185 171..304 100 -> Plus
X 1468251..1468382 305..436 100 -> Plus
X 1468447..1468609 437..599 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:12:33 Download gff for BO14013.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1361837..1361997 7..170 97 -> Plus
arm_X 1362085..1362218 171..304 100 -> Plus
arm_X 1362284..1362415 305..436 100 -> Plus
arm_X 1362480..1362642 437..599 99 -> Plus

BO14013.complete Sequence

622 bp assembled on 2006-10-11

GenBank Submission: FJ632995

> BO14013.complete
GAAGTTATCAGTCGACATGGTGCCTGCGGCCGTCAAGCTGTTGCAGGCCT
CGCTGGGCCAGTGGCGTCGAGGGAGCAAGCTGCATCCCATGGCCAAGGGC
GCGCTCACGTACGCGGTCATGTGGCCGGCGGGCAGCCTGATCCAGCAGGC
TATGGAGGGACGCAAGCTGCGCGAGTACGACTGGGCCAGGGCGTTACGTT
TCAGCTTGTTTGGAGCTCTGTACGTGGCGCCCACTCTGTACGGCTGGGTG
CGGCTCACCAGCGCCATGTGGCCGCAGACTAATCTGCGCACGGGCATCGT
TAAGGCCATCACGGAACAGCTTTCCTACGGACCATTCGCTTGCGTAAGCT
TTTTCATGGGAATGAGCTTGCTGGAGCTGAAGACCTTTAGTCAGGCCGTG
GAAGAGACGAAGGAGAAGGCGGCGCCCACGTACAAGGTCGGCGTATGCAT
CTGGCCTATCCTGCAGACCATTAACTTCTCGCTGGTGCCGGAACACAACC
GCGTGGTGTTTGTAAGCATTTGCAGCCTGATGTGGACAATTTTCCTGGCG
TACATGAAGACGCACCACGAGGAGCAGTCGAACTCCGCGGTTCTGCCTTG
TACAGCAAGCTTTCTAGACCAT

BO14013.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:43:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14777-RF 591 CG14777-PF 1..588 17..604 2925 99.8 Plus
CG14777-RC 591 CG14777-PC 1..588 17..604 2925 99.8 Plus
CG14777-RE 591 CG14777-PE 1..588 17..604 2925 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:43:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG14777-RF 1474 CG14777-RF 809..1396 17..604 2925 99.8 Plus
CG14777-RC 799 CG14777-RC 134..721 17..604 2925 99.8 Plus
CG14777-RE 855 CG14777-RE 190..777 17..604 2925 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:43:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1468445..1468614 435..604 835 99.4 Plus
X 23542271 X 1467811..1467965 17..171 775 100 Plus
X 23542271 X 1468249..1468384 303..438 680 100 Plus
X 23542271 X 1468052..1468186 171..305 675 100 Plus
Blast to na_te.dros performed on 2014-11-27 08:43:51 has no hits.

BO14013.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:22:56 Download gff for BO14013.complete
Subject Subject Range Query Range Percent Splice Strand
CG14777-RB 1..591 17..605 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:56:53 Download gff for BO14013.complete
Subject Subject Range Query Range Percent Splice Strand
CG14777-RC 127..726 7..612 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:13:02 Download gff for BO14013.complete
Subject Subject Range Query Range Percent Splice Strand
CG14777-RD 240..827 17..606 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:22:56 Download gff for BO14013.complete
Subject Subject Range Query Range Percent Splice Strand
CG14777-RB 183..782 7..612 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:25:27 Download gff for BO14013.complete
Subject Subject Range Query Range Percent Splice Strand
CG14777-RE 190..777 17..606 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:25:27 Download gff for BO14013.complete
Subject Subject Range Query Range Percent Splice Strand
X 1467811..1467964 17..170 100 -> Plus
X 1468052..1468185 171..304 100 -> Plus
X 1468251..1468382 305..436 100 -> Plus
X 1468447..1468614 437..606 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:13:02 Download gff for BO14013.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1361844..1361997 17..170 100 -> Plus
arm_X 1362085..1362218 171..304 100 -> Plus
arm_X 1362284..1362415 305..436 100 -> Plus
arm_X 1362480..1362647 437..606 98   Plus

BO14013.pep Sequence

Translation from 16 to 622

> BO14013.pep
MVPAAVKLLQASLGQWRRGSKLHPMAKGALTYAVMWPAGSLIQQAMEGRK
LREYDWARALRFSLFGALYVAPTLYGWVRLTSAMWPQTNLRTGIVKAITE
QLSYGPFACVSFFMGMSLLELKTFSQAVEETKEKAAPTYKVGVCIWPILQ
TINFSLVPEHNRVVFVSICSLMWTIFLAYMKTHHEEQSNSAVLPCTASFL
DH

BO14013.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:41:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14777-PF 196 CG14777-PF 1..196 1..196 1030 100 Plus
CG14777-PC 196 CG14777-PC 1..196 1..196 1030 100 Plus
CG14777-PE 196 CG14777-PE 1..196 1..196 1030 100 Plus
CG14777-PD 196 CG14777-PD 1..196 1..196 1030 100 Plus
CG14777-PB 196 CG14777-PB 1..196 1..196 1030 100 Plus